| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
Click here to switch to the map view.
The map label for this gene is 238025028
Identifier: 238025028
GI number: 238025028
Start: 2112210
End: 2112656
Strand: Reverse
Name: 238025028
Synonym: bglu_2g16850
Alternate gene names: NA
Gene position: 2112656-2112210 (Counterclockwise)
Preceding gene: 238025029
Following gene: 238025023
Centisome position: 74.72
GC content: 66.0
Gene sequence:
>447_bases ATGAGCCAGGCATGGATCTATCCCTTCATCATTCTGGGCGGCATCCTGCAGGCCGCAGGCGCGCCCGTCAACGGCGAACT CAAGAGGGCGCTCGTCAATCCCTGGCTCGCGTCGGGCGTGTCGTTCCTGCTCGTCACCTTCCTCGCTATCGCCCTGTTCT GGATACGGCCGACGCCGTTGCCGACGCTCGACGACTTACGCAGCATGAAGTGGTGGGCGCCGCTCGGAGGCGTCGTGGGG GCCGTGGCGGTGTTCGCGGGACTGACGCTCGTGCAGAAGGTGGGCGTCGGCACGCTCAATGGCTTGACCATCTGCGCGAA TCTGGTGGCATCGGTCGCGATCGATCATTTCGGCCTGCTGGGCGTGGGCGAGCATCCTCTGAGCTGGCTGCGCGCGCTCG GGACGCTGTTGATGGTGGCCGGGGTCGCGCTCGTCATGCGCTTCTGA
Upstream 100 bases:
>100_bases CAAGGTCGGTGGGCTCGTCATGCTGCCCGCGCTCGCGCTGGCGCTCGCCAGCCGCCTGCTGATCGGACATTGATGCTACC AACGCACGGAGGTCGGACCA
Downstream 100 bases:
>100_bases AGGCCGGCGCCAAGCCGCTTCGGCGCGCTTCGGCGGATGGGCCGCCGGTCATGCCAGCGGCCTGCGATCTGCAGCGCAAG GCCGGCGCAGCCACGGCACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 148; Mature: 147
Protein sequence:
>148_residues MSQAWIYPFIILGGILQAAGAPVNGELKRALVNPWLASGVSFLLVTFLAIALFWIRPTPLPTLDDLRSMKWWAPLGGVVG AVAVFAGLTLVQKVGVGTLNGLTICANLVASVAIDHFGLLGVGEHPLSWLRALGTLLMVAGVALVMRF
Sequences:
>Translated_148_residues MSQAWIYPFIILGGILQAAGAPVNGELKRALVNPWLASGVSFLLVTFLAIALFWIRPTPLPTLDDLRSMKWWAPLGGVVG AVAVFAGLTLVQKVGVGTLNGLTICANLVASVAIDHFGLLGVGEHPLSWLRALGTLLMVAGVALVMRF >Mature_147_residues SQAWIYPFIILGGILQAAGAPVNGELKRALVNPWLASGVSFLLVTFLAIALFWIRPTPLPTLDDLRSMKWWAPLGGVVGA VAVFAGLTLVQKVGVGTLNGLTICANLVASVAIDHFGLLGVGEHPLSWLRALGTLLMVAGVALVMRF
Specific function: Unknown
COG id: COG3238
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15630; Mature: 15499
Theoretical pI: Translated: 10.12; Mature: 10.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQAWIYPFIILGGILQAAGAPVNGELKRALVNPWLASGVSFLLVTFLAIALFWIRPTPL CCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PTLDDLRSMKWWAPLGGVVGAVAVFAGLTLVQKVGVGTLNGLTICANLVASVAIDHFGLL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCC GVGEHPLSWLRALGTLLMVAGVALVMRF CCCCCHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SQAWIYPFIILGGILQAAGAPVNGELKRALVNPWLASGVSFLLVTFLAIALFWIRPTPL CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PTLDDLRSMKWWAPLGGVVGAVAVFAGLTLVQKVGVGTLNGLTICANLVASVAIDHFGLL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCC GVGEHPLSWLRALGTLLMVAGVALVMRF CCCCCHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA