| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is ucpA [C]
Identifier: 238025020
GI number: 238025020
Start: 2102541
End: 2103311
Strand: Reverse
Name: ucpA [C]
Synonym: bglu_2g16770
Alternate gene names: 238025020
Gene position: 2103311-2102541 (Counterclockwise)
Preceding gene: 238025021
Following gene: 238025019
Centisome position: 74.39
GC content: 70.69
Gene sequence:
>771_bases ATGATAGCTCCCAATCTGTTCGACCTGAGCGGCAAGATCGCGCTCGTCAGCGGCGCGAGCCGCGGCATCGGCGAGGAAGC CGCGCGCCTGCTGGCCGCGTTCGGCGCCCATGTGATCGTCGCGAGCCGGCGCATCGACGACTGCCGGCGCGTGGCCGAGG CGATCACGGCCGACGGCGGCTCGGCCGAGGCCGCCGCCTGCCATATCGGCGAGCCCGGCCAGATCGAGGCGCTCTACGCC GGCCTCGACGCGCGCCATGGCCGGCTCGACGTGCTCGTCAACAACGCCGCCGCGAATCCGTACTACGGCCCGATCGTCGA TACCGGCCTCGACGCGTTCCAGAAGACCGTCGACGTCAACATCCGCGGCTACTTCTTCATGTCGACGCACGGCGCGCGCC GGATGGCCGCGAACGGCGGCGGCGCGATCGTCAACGTGGCCTCGGTGAACGGCGTGATCCCCGGCGACCAGCAGGGCATC TACTCGATCACGAAGGCCGCCGTGATCTCCATGACGAAGGCGTTCGCGATCGAGTGCGCAGCCGGCGGCGTGCGCTGCAA CGCGCTGCTGCCGGGGCTGACCGACACCAAGTTCGCCTCGGCGCTGACCCGCACGCCGGCACTGCTCGAGCGCGTGCTCG CCCATGTGCCGATGCGGCGCGTGGCGCAGCCCTCCGAGATGGCCGGCGCGATCCTGTTCCTCGCCTCGGCCGCGTCGAGC TACACCACGGGCGCCGTGCTGAACGTCGACGGCGGCTATCTGTCGGTATAG
Upstream 100 bases:
>100_bases CCGACGCCGCGCTCGTCACACACCGGTGAGCGCGTAAGCGCTGCCGGCCGAGGTGTTGCGTTACCCGGTTTTCCGTTTTC CTACAGCGAGATTCGACACG
Downstream 100 bases:
>100_bases TGACGACGCGCGGCGCGGGCGCGCCGCACGAGGCAATCGACAAGGCAAGCGACAACCCAATCGAAACGGGAGGAGCAGGG ATGACGACGATCGGAACGCC
Product: short chain dehydrogenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 256; Mature: 256
Protein sequence:
>256_residues MIAPNLFDLSGKIALVSGASRGIGEEAARLLAAFGAHVIVASRRIDDCRRVAEAITADGGSAEAAACHIGEPGQIEALYA GLDARHGRLDVLVNNAAANPYYGPIVDTGLDAFQKTVDVNIRGYFFMSTHGARRMAANGGGAIVNVASVNGVIPGDQQGI YSITKAAVISMTKAFAIECAAGGVRCNALLPGLTDTKFASALTRTPALLERVLAHVPMRRVAQPSEMAGAILFLASAASS YTTGAVLNVDGGYLSV
Sequences:
>Translated_256_residues MIAPNLFDLSGKIALVSGASRGIGEEAARLLAAFGAHVIVASRRIDDCRRVAEAITADGGSAEAAACHIGEPGQIEALYA GLDARHGRLDVLVNNAAANPYYGPIVDTGLDAFQKTVDVNIRGYFFMSTHGARRMAANGGGAIVNVASVNGVIPGDQQGI YSITKAAVISMTKAFAIECAAGGVRCNALLPGLTDTKFASALTRTPALLERVLAHVPMRRVAQPSEMAGAILFLASAASS YTTGAVLNVDGGYLSV >Mature_256_residues MIAPNLFDLSGKIALVSGASRGIGEEAARLLAAFGAHVIVASRRIDDCRRVAEAITADGGSAEAAACHIGEPGQIEALYA GLDARHGRLDVLVNNAAANPYYGPIVDTGLDAFQKTVDVNIRGYFFMSTHGARRMAANGGGAIVNVASVNGVIPGDQQGI YSITKAAVISMTKAFAIECAAGGVRCNALLPGLTDTKFASALTRTPALLERVLAHVPMRRVAQPSEMAGAILFLASAASS YTTGAVLNVDGGYLSV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI32483357, Length=247, Percent_Identity=35.6275303643725, Blast_Score=160, Evalue=1e-39, Organism=Homo sapiens, GI126723750, Length=247, Percent_Identity=29.9595141700405, Blast_Score=122, Evalue=3e-28, Organism=Homo sapiens, GI5031737, Length=243, Percent_Identity=29.6296296296296, Blast_Score=122, Evalue=3e-28, Organism=Homo sapiens, GI126723191, Length=193, Percent_Identity=33.6787564766839, Blast_Score=116, Evalue=2e-26, Organism=Homo sapiens, GI19923817, Length=262, Percent_Identity=26.7175572519084, Blast_Score=106, Evalue=2e-23, Organism=Homo sapiens, GI40254992, Length=241, Percent_Identity=30.7053941908714, Blast_Score=105, Evalue=6e-23, Organism=Homo sapiens, GI7705925, Length=258, Percent_Identity=32.1705426356589, Blast_Score=104, Evalue=7e-23, Organism=Homo sapiens, GI33667109, Length=194, Percent_Identity=30.4123711340206, Blast_Score=101, Evalue=7e-22, Organism=Homo sapiens, GI10190704, Length=254, Percent_Identity=30.3149606299213, Blast_Score=100, Evalue=2e-21, Organism=Homo sapiens, GI4503301, Length=261, Percent_Identity=28.735632183908, Blast_Score=100, Evalue=2e-21, Organism=Homo sapiens, GI209862901, Length=211, Percent_Identity=35.0710900473934, Blast_Score=99, Evalue=3e-21, Organism=Homo sapiens, GI19923983, Length=211, Percent_Identity=35.0710900473934, Blast_Score=99, Evalue=3e-21, Organism=Homo sapiens, GI15277342, Length=268, Percent_Identity=28.3582089552239, Blast_Score=88, Evalue=6e-18, Organism=Homo sapiens, GI66933014, Length=180, Percent_Identity=32.2222222222222, Blast_Score=87, Evalue=1e-17, Organism=Homo sapiens, GI59889578, Length=191, Percent_Identity=33.5078534031414, Blast_Score=84, Evalue=1e-16, Organism=Homo sapiens, GI302344755, Length=104, Percent_Identity=33.6538461538462, Blast_Score=78, Evalue=9e-15, Organism=Homo sapiens, GI31542939, Length=207, Percent_Identity=26.5700483091787, Blast_Score=78, Evalue=1e-14, Organism=Homo sapiens, GI109715829, Length=256, Percent_Identity=24.609375, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI7706318, Length=151, Percent_Identity=29.1390728476821, Blast_Score=72, Evalue=5e-13, Organism=Homo sapiens, GI225579078, Length=212, Percent_Identity=27.3584905660377, Blast_Score=69, Evalue=6e-12, Organism=Homo sapiens, GI224922801, Length=178, Percent_Identity=26.9662921348315, Blast_Score=65, Evalue=5e-11, Organism=Escherichia coli, GI87082100, Length=251, Percent_Identity=35.0597609561753, Blast_Score=130, Evalue=6e-32, Organism=Escherichia coli, GI87082160, Length=250, Percent_Identity=32.8, Blast_Score=129, Evalue=2e-31, Organism=Escherichia coli, GI1787905, Length=249, Percent_Identity=33.7349397590361, Blast_Score=124, Evalue=5e-30, Organism=Escherichia coli, GI2367175, Length=246, Percent_Identity=34.9593495934959, Blast_Score=119, Evalue=2e-28, Organism=Escherichia coli, GI1790717, Length=250, Percent_Identity=29.2, Blast_Score=116, Evalue=2e-27, Organism=Escherichia coli, GI1787335, Length=252, Percent_Identity=32.1428571428571, Blast_Score=116, Evalue=2e-27, Organism=Escherichia coli, GI1789208, Length=250, Percent_Identity=31.6, Blast_Score=107, Evalue=9e-25, Organism=Escherichia coli, GI1788459, Length=245, Percent_Identity=31.0204081632653, Blast_Score=105, Evalue=2e-24, Organism=Escherichia coli, GI1786812, Length=253, Percent_Identity=31.6205533596838, Blast_Score=95, Evalue=5e-21, Organism=Escherichia coli, GI1789378, Length=246, Percent_Identity=27.6422764227642, Blast_Score=84, Evalue=7e-18, Organism=Escherichia coli, GI1789057, Length=257, Percent_Identity=29.9610894941634, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI2367365, Length=247, Percent_Identity=27.9352226720648, Blast_Score=78, Evalue=5e-16, Organism=Escherichia coli, GI1787820, Length=189, Percent_Identity=26.984126984127, Blast_Score=65, Evalue=5e-12, Organism=Caenorhabditis elegans, GI17560676, Length=252, Percent_Identity=30.5555555555556, Blast_Score=145, Evalue=3e-35, Organism=Caenorhabditis elegans, GI17555706, Length=247, Percent_Identity=35.6275303643725, Blast_Score=120, Evalue=9e-28, Organism=Caenorhabditis elegans, GI71994604, Length=247, Percent_Identity=35.2226720647773, Blast_Score=119, Evalue=2e-27, Organism=Caenorhabditis elegans, GI71994600, Length=248, Percent_Identity=35.0806451612903, Blast_Score=118, Evalue=3e-27, Organism=Caenorhabditis elegans, GI193204405, Length=261, Percent_Identity=35.632183908046, Blast_Score=117, Evalue=7e-27, Organism=Caenorhabditis elegans, GI17561402, Length=252, Percent_Identity=29.7619047619048, Blast_Score=110, Evalue=8e-25, Organism=Caenorhabditis elegans, GI17536651, Length=267, Percent_Identity=30.7116104868914, Blast_Score=107, Evalue=9e-24, Organism=Caenorhabditis elegans, GI25147288, Length=248, Percent_Identity=32.258064516129, Blast_Score=106, Evalue=2e-23, Organism=Caenorhabditis elegans, GI17531453, Length=260, Percent_Identity=33.4615384615385, Blast_Score=105, Evalue=2e-23, Organism=Caenorhabditis elegans, GI17562908, Length=268, Percent_Identity=32.8358208955224, Blast_Score=105, Evalue=3e-23, Organism=Caenorhabditis elegans, GI17560220, Length=260, Percent_Identity=32.3076923076923, Blast_Score=103, Evalue=6e-23, Organism=Caenorhabditis elegans, GI115534694, Length=253, Percent_Identity=31.2252964426877, Blast_Score=103, Evalue=6e-23, Organism=Caenorhabditis elegans, GI17562906, Length=262, Percent_Identity=33.206106870229, Blast_Score=102, Evalue=2e-22, Organism=Caenorhabditis elegans, GI17536025, Length=264, Percent_Identity=29.5454545454545, Blast_Score=100, Evalue=1e-21, Organism=Caenorhabditis elegans, GI17560332, Length=262, Percent_Identity=32.0610687022901, Blast_Score=99, Evalue=2e-21, Organism=Caenorhabditis elegans, GI17562910, Length=260, Percent_Identity=30.3846153846154, Blast_Score=98, Evalue=4e-21, Organism=Caenorhabditis elegans, GI17559104, Length=257, Percent_Identity=32.295719844358, Blast_Score=96, Evalue=2e-20, Organism=Caenorhabditis elegans, GI17562904, Length=263, Percent_Identity=29.6577946768061, Blast_Score=96, Evalue=3e-20, Organism=Caenorhabditis elegans, GI17560150, Length=261, Percent_Identity=31.4176245210728, Blast_Score=95, Evalue=3e-20, Organism=Caenorhabditis elegans, GI17544670, Length=265, Percent_Identity=29.811320754717, Blast_Score=92, Evalue=2e-19, Organism=Caenorhabditis elegans, GI17561272, Length=263, Percent_Identity=28.5171102661597, Blast_Score=91, Evalue=8e-19, Organism=Caenorhabditis elegans, GI72000259, Length=261, Percent_Identity=29.1187739463602, Blast_Score=90, Evalue=1e-18, Organism=Caenorhabditis elegans, GI17562990, Length=261, Percent_Identity=30.6513409961686, Blast_Score=90, Evalue=1e-18, Organism=Caenorhabditis elegans, GI17538182, Length=255, Percent_Identity=32.156862745098, Blast_Score=87, Evalue=7e-18, Organism=Caenorhabditis elegans, GI17538480, Length=261, Percent_Identity=29.8850574712644, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17551412, Length=262, Percent_Identity=29.7709923664122, Blast_Score=85, Evalue=3e-17, Organism=Caenorhabditis elegans, GI17565030, Length=261, Percent_Identity=29.1187739463602, Blast_Score=84, Evalue=5e-17, Organism=Caenorhabditis elegans, GI17508651, Length=245, Percent_Identity=27.7551020408163, Blast_Score=80, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17563726, Length=259, Percent_Identity=25.4826254826255, Blast_Score=78, Evalue=4e-15, Organism=Caenorhabditis elegans, GI17538486, Length=264, Percent_Identity=30.3030303030303, Blast_Score=77, Evalue=8e-15, Organism=Caenorhabditis elegans, GI17508895, Length=208, Percent_Identity=25.9615384615385, Blast_Score=70, Evalue=8e-13, Organism=Caenorhabditis elegans, GI17555612, Length=217, Percent_Identity=28.110599078341, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI193207185, Length=145, Percent_Identity=33.7931034482759, Blast_Score=69, Evalue=3e-12, Organism=Caenorhabditis elegans, GI71997099, Length=213, Percent_Identity=29.1079812206573, Blast_Score=67, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6324126, Length=253, Percent_Identity=24.901185770751, Blast_Score=77, Evalue=3e-15, Organism=Drosophila melanogaster, GI21355319, Length=244, Percent_Identity=32.3770491803279, Blast_Score=140, Evalue=9e-34, Organism=Drosophila melanogaster, GI21357041, Length=248, Percent_Identity=35.8870967741936, Blast_Score=124, Evalue=7e-29, Organism=Drosophila melanogaster, GI23397609, Length=250, Percent_Identity=32.8, Blast_Score=114, Evalue=5e-26, Organism=Drosophila melanogaster, GI24644339, Length=253, Percent_Identity=32.0158102766798, Blast_Score=112, Evalue=3e-25, Organism=Drosophila melanogaster, GI28571526, Length=248, Percent_Identity=33.8709677419355, Blast_Score=111, Evalue=6e-25, Organism=Drosophila melanogaster, GI24639444, Length=248, Percent_Identity=31.8548387096774, Blast_Score=106, Evalue=1e-23, Organism=Drosophila melanogaster, GI24643142, Length=251, Percent_Identity=32.2709163346614, Blast_Score=100, Evalue=9e-22, Organism=Drosophila melanogaster, GI24644337, Length=251, Percent_Identity=32.6693227091633, Blast_Score=98, Evalue=6e-21, Organism=Drosophila melanogaster, GI116007236, Length=197, Percent_Identity=26.9035532994924, Blast_Score=74, Evalue=7e-14, Organism=Drosophila melanogaster, GI17737361, Length=256, Percent_Identity=29.296875, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI281364892, Length=210, Percent_Identity=27.1428571428571, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI116007238, Length=175, Percent_Identity=26.8571428571429, Blast_Score=66, Evalue=3e-11, Organism=Drosophila melanogaster, GI21358495, Length=201, Percent_Identity=27.363184079602, Blast_Score=66, Evalue=3e-11, Organism=Drosophila melanogaster, GI24586328, Length=202, Percent_Identity=26.2376237623762, Blast_Score=65, Evalue=4e-11, Organism=Drosophila melanogaster, GI24641232, Length=219, Percent_Identity=26.4840182648402, Blast_Score=65, Evalue=4e-11, Organism=Drosophila melanogaster, GI116007234, Length=199, Percent_Identity=27.6381909547739, Blast_Score=65, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 26330; Mature: 26330
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: PS00061 ADH_SHORT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIAPNLFDLSGKIALVSGASRGIGEEAARLLAAFGAHVIVASRRIDDCRRVAEAITADGG CCCCCEECCCCCEEEEECCCCCCHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHCCCC SAEAAACHIGEPGQIEALYAGLDARHGRLDVLVNNAAANPYYGPIVDTGLDAFQKTVDVN CCCEEEEECCCCCCEEEEEECCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHEEEE IRGYFFMSTHGARRMAANGGGAIVNVASVNGVIPGDQQGIYSITKAAVISMTKAFAIECA EEEEEEEECCCCCEEECCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHEEEEC AGGVRCNALLPGLTDTKFASALTRTPALLERVLAHVPMRRVAQPSEMAGAILFLASAASS CCCEEEEEECCCCCCHHHHHHHHCCHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHCCC YTTGAVLNVDGGYLSV CCCCEEEEECCCEECC >Mature Secondary Structure MIAPNLFDLSGKIALVSGASRGIGEEAARLLAAFGAHVIVASRRIDDCRRVAEAITADGG CCCCCEECCCCCEEEEECCCCCCHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHCCCC SAEAAACHIGEPGQIEALYAGLDARHGRLDVLVNNAAANPYYGPIVDTGLDAFQKTVDVN CCCEEEEECCCCCCEEEEEECCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHEEEE IRGYFFMSTHGARRMAANGGGAIVNVASVNGVIPGDQQGIYSITKAAVISMTKAFAIECA EEEEEEEECCCCCEEECCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHEEEEC AGGVRCNALLPGLTDTKFASALTRTPALLERVLAHVPMRRVAQPSEMAGAILFLASAASS CCCEEEEEECCCCCCHHHHHHHHCCHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHCCC YTTGAVLNVDGGYLSV CCCCEEEEECCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10360571 [H]