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The map label for this gene is yncB [H]

Identifier: 238025018

GI number: 238025018

Start: 2100568

End: 2101590

Strand: Reverse

Name: yncB [H]

Synonym: bglu_2g16750

Alternate gene names: 238025018

Gene position: 2101590-2100568 (Counterclockwise)

Preceding gene: 238025019

Following gene: 238025014

Centisome position: 74.33

GC content: 70.67

Gene sequence:

>1023_bases
ATGTCCGACATCATGAACCGCCAGTTGCGCCTGAAGGCGCGCCCCGAAGCGCGCGTGGGCGCCGAACATTTCTCGCTCGT
CGAGACGCCGCTGCCCGAGCTGCGCGAGGGCGAGGTGCTGATTCGCGTGCTGTACCTGTCGATGGACCCGACCAACCGCG
TCTGGATGAGCGACATTCCGCAGTACCTGCCGCCGGTGGCGATCGGCGAGACCATGCGCGCGCTCGGCATCGGCCGCGTG
AGCGCCTCGCGCAGCGAGAAGTTCGCGGTGGGCGACCTGGTGCAGGGGCTGGTGGGCTGGCAGGATTACGCGCACGTGGC
GGCCGACGAGGTGCCCAAGCTGCTGAAGCTGCCCGCCGAGCCGGGGCTGCCGCTGCCGACGCTGCTCGGCGCCTGCGGCA
TGAGCGGGCTGACCGCCTATTACGGGCTGACCGAAATCGCGCCGGTGCAGCCCGGCGAGACGCTGGTGGTGTCGGCGGCG
GCGGGCTCGGTGGGCTCGATCGCCGGGCAGATCGGCAAGATCCACGGCGCGCGCGTGGTGGGGATCGCCGGCGGCGAGGA
GAAGTGCCGCTACCTGACCGAGACGCTCGGCTTCGACGCGGCCGTCGACTACAAGGCGCCCGACTGGAAGACGGCGCTGA
AGGCCGCCACGCCCGACGGCGTCCATGTGAACTTCGAGAACGTGGGCGGCGAGGTGATGCGCGCGGTGCTCTCGCGGATG
GTGATCGGCGGGCGCGTGGCGCTGTGCGGCGTGATCTCGAGCTACAACAGCAACGGCGGCCGGGCCGGCGACGATTTCGG
CGTGCTGATCTCGAAGCGGCTGACCATGCGCGGCTTCCTGATCCTCGACTACCGCAAGAACCGCGAGGCCATGCAGCAGC
TGGCGGGATGGCTGCGCGACGGCCGCCTGAAGGCCGAGGAAACCGTGGCCGAGGGGCTCGAGCACGCGCCGGAGGTGCTG
AACCGGCTGTTCGACGGCAGCCATCGCGGCAAGCTCGTGCTGCGCGTGGCCGAGGACGCCTGA

Upstream 100 bases:

>100_bases
CGACGGCGGGCTGTGTGCGATGTGAGGCGCGCGCGCCGCGCATCGCGCGTGGCGCACCGAACCATCCAATCCGTATTCCA
GTGAATTTCCAGGAGCCATC

Downstream 100 bases:

>100_bases
AGGGGGCCGGCCTGGCCGCCGCGCGCGGTCAGTGATAGACCGTGGTGGACGACTGCAGCTGCGTGAGCGTGCCGTTGCGC
AGGCGGAACCAGCCCTGCGG

Product: zinc-binding alcohol dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 340; Mature: 339

Protein sequence:

>340_residues
MSDIMNRQLRLKARPEARVGAEHFSLVETPLPELREGEVLIRVLYLSMDPTNRVWMSDIPQYLPPVAIGETMRALGIGRV
SASRSEKFAVGDLVQGLVGWQDYAHVAADEVPKLLKLPAEPGLPLPTLLGACGMSGLTAYYGLTEIAPVQPGETLVVSAA
AGSVGSIAGQIGKIHGARVVGIAGGEEKCRYLTETLGFDAAVDYKAPDWKTALKAATPDGVHVNFENVGGEVMRAVLSRM
VIGGRVALCGVISSYNSNGGRAGDDFGVLISKRLTMRGFLILDYRKNREAMQQLAGWLRDGRLKAEETVAEGLEHAPEVL
NRLFDGSHRGKLVLRVAEDA

Sequences:

>Translated_340_residues
MSDIMNRQLRLKARPEARVGAEHFSLVETPLPELREGEVLIRVLYLSMDPTNRVWMSDIPQYLPPVAIGETMRALGIGRV
SASRSEKFAVGDLVQGLVGWQDYAHVAADEVPKLLKLPAEPGLPLPTLLGACGMSGLTAYYGLTEIAPVQPGETLVVSAA
AGSVGSIAGQIGKIHGARVVGIAGGEEKCRYLTETLGFDAAVDYKAPDWKTALKAATPDGVHVNFENVGGEVMRAVLSRM
VIGGRVALCGVISSYNSNGGRAGDDFGVLISKRLTMRGFLILDYRKNREAMQQLAGWLRDGRLKAEETVAEGLEHAPEVL
NRLFDGSHRGKLVLRVAEDA
>Mature_339_residues
SDIMNRQLRLKARPEARVGAEHFSLVETPLPELREGEVLIRVLYLSMDPTNRVWMSDIPQYLPPVAIGETMRALGIGRVS
ASRSEKFAVGDLVQGLVGWQDYAHVAADEVPKLLKLPAEPGLPLPTLLGACGMSGLTAYYGLTEIAPVQPGETLVVSAAA
GSVGSIAGQIGKIHGARVVGIAGGEEKCRYLTETLGFDAAVDYKAPDWKTALKAATPDGVHVNFENVGGEVMRAVLSRMV
IGGRVALCGVISSYNSNGGRAGDDFGVLISKRLTMRGFLILDYRKNREAMQQLAGWLRDGRLKAEETVAEGLEHAPEVLN
RLFDGSHRGKLVLRVAEDA

Specific function: Unknown

COG id: COG2130

COG function: function code R; Putative NADP-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NADP-dependent oxidoreductase L4BD family [H]

Homologues:

Organism=Homo sapiens, GI226059159, Length=316, Percent_Identity=35.7594936708861, Blast_Score=192, Evalue=5e-49,
Organism=Homo sapiens, GI226059133, Length=316, Percent_Identity=35.7594936708861, Blast_Score=192, Evalue=5e-49,
Organism=Homo sapiens, GI226246682, Length=350, Percent_Identity=35.1428571428571, Blast_Score=187, Evalue=1e-47,
Organism=Homo sapiens, GI226246680, Length=350, Percent_Identity=35.1428571428571, Blast_Score=187, Evalue=1e-47,
Organism=Homo sapiens, GI22748929, Length=350, Percent_Identity=35.1428571428571, Blast_Score=187, Evalue=1e-47,
Organism=Homo sapiens, GI226056130, Length=288, Percent_Identity=36.8055555555556, Blast_Score=172, Evalue=5e-43,
Organism=Homo sapiens, GI28557745, Length=334, Percent_Identity=28.7425149700599, Blast_Score=109, Evalue=4e-24,
Organism=Homo sapiens, GI22538446, Length=311, Percent_Identity=28.2958199356913, Blast_Score=70, Evalue=3e-12,
Organism=Homo sapiens, GI22538444, Length=311, Percent_Identity=28.2958199356913, Blast_Score=70, Evalue=3e-12,
Organism=Escherichia coli, GI226510941, Length=341, Percent_Identity=41.6422287390029, Blast_Score=253, Evalue=1e-68,
Organism=Caenorhabditis elegans, GI133901712, Length=332, Percent_Identity=32.2289156626506, Blast_Score=160, Evalue=1e-39,
Organism=Caenorhabditis elegans, GI133901710, Length=332, Percent_Identity=31.3253012048193, Blast_Score=160, Evalue=1e-39,
Organism=Saccharomyces cerevisiae, GI6323504, Length=336, Percent_Identity=30.3571428571429, Blast_Score=147, Evalue=3e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013149
- InterPro:   IPR002085
- InterPro:   IPR011032
- InterPro:   IPR016040 [H]

Pfam domain/function: PF00107 ADH_zinc_N [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 36555; Mature: 36423

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDIMNRQLRLKARPEARVGAEHFSLVETPLPELREGEVLIRVLYLSMDPTNRVWMSDIP
CCCHHCCCEEEECCCCHHHCHHHHHHHHCCCCCCCCCCEEEEEEEEECCCCCCCHHHHHH
QYLPPVAIGETMRALGIGRVSASRSEKFAVGDLVQGLVGWQDYAHVAADEVPKLLKLPAE
HHCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PGLPLPTLLGACGMSGLTAYYGLTEIAPVQPGETLVVSAAAGSVGSIAGQIGKIHGARVV
CCCCHHHHHHHHCCHHHHHHHCCHHCCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCEEE
GIAGGEEKCRYLTETLGFDAAVDYKAPDWKTALKAATPDGVHVNFENVGGEVMRAVLSRM
EECCCHHHHHHHHHHHCCCCEECCCCCCHHHHHHCCCCCCEEEEHHHCCHHHHHHHHHHH
VIGGRVALCGVISSYNSNGGRAGDDFGVLISKRLTMRGFLILDYRKNREAMQQLAGWLRD
HHCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHC
GRLKAEETVAEGLEHAPEVLNRLFDGSHRGKLVLRVAEDA
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCC
>Mature Secondary Structure 
SDIMNRQLRLKARPEARVGAEHFSLVETPLPELREGEVLIRVLYLSMDPTNRVWMSDIP
CCHHCCCEEEECCCCHHHCHHHHHHHHCCCCCCCCCCEEEEEEEEECCCCCCCHHHHHH
QYLPPVAIGETMRALGIGRVSASRSEKFAVGDLVQGLVGWQDYAHVAADEVPKLLKLPAE
HHCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PGLPLPTLLGACGMSGLTAYYGLTEIAPVQPGETLVVSAAAGSVGSIAGQIGKIHGARVV
CCCCHHHHHHHHCCHHHHHHHCCHHCCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCEEE
GIAGGEEKCRYLTETLGFDAAVDYKAPDWKTALKAATPDGVHVNFENVGGEVMRAVLSRM
EECCCHHHHHHHHHHHCCCCEECCCCCCHHHHHHCCCCCCEEEEHHHCCHHHHHHHHHHH
VIGGRVALCGVISSYNSNGGRAGDDFGVLISKRLTMRGFLILDYRKNREAMQQLAGWLRD
HHCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHC
GRLKAEETVAEGLEHAPEVLNRLFDGSHRGKLVLRVAEDA
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]