Click here to switch to the map view.

The map label for this gene is wcaL [C]

Identifier: 238024987

GI number: 238024987

Start: 2065037

End: 2066203

Strand: Reverse

Name: wcaL [C]

Synonym: bglu_2g16440

Alternate gene names: 238024987

Gene position: 2066203-2065037 (Counterclockwise)

Preceding gene: 238024988

Following gene: 238024984

Centisome position: 73.08

GC content: 73.18

Gene sequence:

>1167_bases
ATGAAAGACGCTTCCCCCTCGACGATCAAGTCGCTGCAGATCGGCATGCACTGGTTCCCCGAACGCGCGGGCGGCCTCGA
TCGCATGTACTACTCGCTGGTCGGCGCGCTGCCCGGCGCCGGCGTGGCCGTGCGCGGCGTGGTGGCCGGCTCGGGGCGCG
TGGCGGCCGATACCGGCGGCGCGATCCGCGGCTTCGGGCCGGCCTCGCAGTCGCTGCCGCGCCGCATGATGGCCGCGCGC
AGCGCGCTGCGCGAGGTGATCCGCCAGGAGCGGCCCGACGTGGTGTCGTCGCACTTCGCGCTCTACACGTTCCCGGGCCT
CGACGTCACGCGCGGCATCCCGCAGGTCTCGCACTTCCAGGGGCCGTGGGCCGACGAGAGCCAGGTGGAGGGCGCCGATT
CGCTCGGCCAGCGCGCCAAGCGCTATCTGGAGCAGGCCGTCTATGCGCGCGCCTCGCGGCTGATCGTGCTGTCGAGCGCG
TTCGGCGAGATCCTGACCGCGCGCTACGGCATCTCGCAGGAGAAGGTGCGGATCGTGCCGGGCTGTGTGGACACCGCGCA
GTTCGACCTGCCGATTACGCAGGCCGAGGCGCGCCGCAAGCTGCAACTGCCGGTGGGCCGGCCGATCGTGCTGGCGGTGC
GGCGCCTCGTGCGGCGCATGGGGCTCGAGGATCTGATCGAGGCCGTGAACACCGTGCGGCGCCGCCATCCGGACGTGCTG
CTGCTGATCGCCGGCAAGGGGCGGCTCGCCGAGGAGCTGCAGCAGCGCATCGACGCCGCCGGGCTCGGCGAGCACGTCAA
GCTGCTCGGCTTCGTGCCCGACGAGCATCTGGCCGCGCTGTACCGCGCGGCCACCGTCAGCGTGGTGCCGACCGTCGCGC
TAGAAGGCTTCGGGCTGATCACGGTGGAGTCGCTGGCCGCGGGCACGCCGGTGCTCGTCACGCCGGTGGGCGGGCTGCCG
GAGGCGGTGTCGGGTCTGTCGCCCGAGCTGGTGCTGCGCGGCACCGGCGCCGATGCCATCGCCGAGGGGCTCGACGGCGC
GCTGTCGGGCACGCTGAAGCTGCCCGACGCCGAGGCCTGCCGGCGCTACGCGCGCGAGAACTTCGACAACGCCGTGATCG
CCAGGCGCGTCGCGCAGGTCTACGACGAGGCGATCCGGGCCGGCTAG

Upstream 100 bases:

>100_bases
ACCGGCGGCTGATGCCGTCTTCCCAATCATCGGCGCACGGCGCGCCCGGCCCCGCCGCGGTGGCCGGACCCGGCCCCGTC
GCCACGCAGGAGCCATTGTG

Downstream 100 bases:

>100_bases
CGAGCGCGCGGCGCGGCCCGGCGCCATCTCGCGCGATGGCGTCGCACGCGGCGAAGGGCGGGTGCGGGCCGGGCGCGGCC
GGCGCTCGACCGGTGCGGCG

Product: glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 388; Mature: 388

Protein sequence:

>388_residues
MKDASPSTIKSLQIGMHWFPERAGGLDRMYYSLVGALPGAGVAVRGVVAGSGRVAADTGGAIRGFGPASQSLPRRMMAAR
SALREVIRQERPDVVSSHFALYTFPGLDVTRGIPQVSHFQGPWADESQVEGADSLGQRAKRYLEQAVYARASRLIVLSSA
FGEILTARYGISQEKVRIVPGCVDTAQFDLPITQAEARRKLQLPVGRPIVLAVRRLVRRMGLEDLIEAVNTVRRRHPDVL
LLIAGKGRLAEELQQRIDAAGLGEHVKLLGFVPDEHLAALYRAATVSVVPTVALEGFGLITVESLAAGTPVLVTPVGGLP
EAVSGLSPELVLRGTGADAIAEGLDGALSGTLKLPDAEACRRYARENFDNAVIARRVAQVYDEAIRAG

Sequences:

>Translated_388_residues
MKDASPSTIKSLQIGMHWFPERAGGLDRMYYSLVGALPGAGVAVRGVVAGSGRVAADTGGAIRGFGPASQSLPRRMMAAR
SALREVIRQERPDVVSSHFALYTFPGLDVTRGIPQVSHFQGPWADESQVEGADSLGQRAKRYLEQAVYARASRLIVLSSA
FGEILTARYGISQEKVRIVPGCVDTAQFDLPITQAEARRKLQLPVGRPIVLAVRRLVRRMGLEDLIEAVNTVRRRHPDVL
LLIAGKGRLAEELQQRIDAAGLGEHVKLLGFVPDEHLAALYRAATVSVVPTVALEGFGLITVESLAAGTPVLVTPVGGLP
EAVSGLSPELVLRGTGADAIAEGLDGALSGTLKLPDAEACRRYARENFDNAVIARRVAQVYDEAIRAG
>Mature_388_residues
MKDASPSTIKSLQIGMHWFPERAGGLDRMYYSLVGALPGAGVAVRGVVAGSGRVAADTGGAIRGFGPASQSLPRRMMAAR
SALREVIRQERPDVVSSHFALYTFPGLDVTRGIPQVSHFQGPWADESQVEGADSLGQRAKRYLEQAVYARASRLIVLSSA
FGEILTARYGISQEKVRIVPGCVDTAQFDLPITQAEARRKLQLPVGRPIVLAVRRLVRRMGLEDLIEAVNTVRRRHPDVL
LLIAGKGRLAEELQQRIDAAGLGEHVKLLGFVPDEHLAALYRAATVSVVPTVALEGFGLITVESLAAGTPVLVTPVGGLP
EAVSGLSPELVLRGTGADAIAEGLDGALSGTLKLPDAEACRRYARENFDNAVIARRVAQVYDEAIRAG

Specific function: Slime polysaccharide colanic acid biosynthesis. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

Organism=Homo sapiens, GI11863130, Length=383, Percent_Identity=24.2819843342037, Blast_Score=70, Evalue=3e-12,
Organism=Saccharomyces cerevisiae, GI9755344, Length=306, Percent_Identity=22.8758169934641, Blast_Score=67, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296
- InterPro:   IPR013534 [H]

Pfam domain/function: PF08323 Glyco_transf_5; PF00534 Glycos_transf_1 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 41448; Mature: 41448

Theoretical pI: Translated: 9.51; Mature: 9.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDASPSTIKSLQIGMHWFPERAGGLDRMYYSLVGALPGAGVAVRGVVAGSGRVAADTGG
CCCCCCHHHHHHHHHHHHCCHHCCCHHHHHHHHHHCCCCCCEEEEEEEECCCEEEECCCC
AIRGFGPASQSLPRRMMAARSALREVIRQERPDVVSSHFALYTFPGLDVTRGIPQVSHFQ
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCHHHHCCCCHHHCC
GPWADESQVEGADSLGQRAKRYLEQAVYARASRLIVLSSAFGEILTARYGISQEKVRIVP
CCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHCCCCCCCEEEEC
GCVDTAQFDLPITQAEARRKLQLPVGRPIVLAVRRLVRRMGLEDLIEAVNTVRRRHPDVL
CCCCCCCCCCCCCHHHHHHEECCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEE
LLIAGKGRLAEELQQRIDAAGLGEHVKLLGFVPDEHLAALYRAATVSVVPTVALEGFGLI
EEEECCCHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCEE
TVESLAAGTPVLVTPVGGLPEAVSGLSPELVLRGTGADAIAEGLDGALSGTLKLPDAEAC
EEHHHCCCCCEEEECCCCCHHHHCCCCCCEEEECCCHHHHHHCCCHHHCCCEECCCHHHH
RRYARENFDNAVIARRVAQVYDEAIRAG
HHHHHHCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKDASPSTIKSLQIGMHWFPERAGGLDRMYYSLVGALPGAGVAVRGVVAGSGRVAADTGG
CCCCCCHHHHHHHHHHHHCCHHCCCHHHHHHHHHHCCCCCCEEEEEEEECCCEEEECCCC
AIRGFGPASQSLPRRMMAARSALREVIRQERPDVVSSHFALYTFPGLDVTRGIPQVSHFQ
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCHHHHCCCCHHHCC
GPWADESQVEGADSLGQRAKRYLEQAVYARASRLIVLSSAFGEILTARYGISQEKVRIVP
CCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHCCCCCCCEEEEC
GCVDTAQFDLPITQAEARRKLQLPVGRPIVLAVRRLVRRMGLEDLIEAVNTVRRRHPDVL
CCCCCCCCCCCCCHHHHHHEECCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEE
LLIAGKGRLAEELQQRIDAAGLGEHVKLLGFVPDEHLAALYRAATVSVVPTVALEGFGLI
EEEECCCHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCEE
TVESLAAGTPVLVTPVGGLPEAVSGLSPELVLRGTGADAIAEGLDGALSGTLKLPDAEAC
EEHHHCCCCCEEEECCCCCHHHHCCCCCCEEEECCCHHHHHHCCCHHHCCCEECCCHHHH
RRYARENFDNAVIARRVAQVYDEAIRAG
HHHHHHCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]