| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238024974
Identifier: 238024974
GI number: 238024974
Start: 2053689
End: 2054300
Strand: Direct
Name: 238024974
Synonym: bglu_2g16310
Alternate gene names: NA
Gene position: 2053689-2054300 (Clockwise)
Preceding gene: 238024973
Following gene: 238024976
Centisome position: 72.64
GC content: 75.33
Gene sequence:
>612_bases ATGTGCGGCTCTGAACCCGTGCCGACGCCCGCGCTGCCGCCGCTCTACCTGATCACGCCCGAGCCGGCCTCCAACGCGCG CGCCGATCTCGACGCGTTCGTCTCTCGGCTCGACGCGGCGTTCGCCACCGGCATCGCGCTCGTGCAGTTGCGCGTGAAGA CATTCGACGCCGCCGATTACGCGGCGCTGGCCGAGCGCGTGATCGGCCGCGCCCATGCGGCCGGCGCGCGCGTGGTCTGC AATGGTCCGGTCACGCTGCAGGCAGCACGCGCGCTCGGCGCCGACGGCATCCATTTCGGCCACGCCGCGCTCGCCGCCGC CGCGTCGCGGCCGGAGGCGGCCGGCCTGCTGCTGTCGGCCGCCTGCCACGACGCGGCATCGCTGCGCCACGCGGACCGCA TCGGTGCGGACCTCGCCACGCTGTCGCCGGTGAAACCGACGCTGTCGCATCCGGGCGCGCCGGGGCTCGGCTGGCCGCGC TTCGCCGAATGGGTGGCCGGCACGCGCCTGGCCGTCTATGCGCTCGGCGGCATGACGCGCGACGACCTGCCGATCGCGCG CGCGCACGGGGCGCATGGCGTCGCGGGCATTCGGGGCCTGGTGGCGGGATAA
Upstream 100 bases:
>100_bases GAACTGATGACGGACTATCGGCAGCCCGTCAACGCCGTCTATTACCGGCATGCGGCACTGACGGGCCGCGTGCAGGGTTT CCTCGATTTCCTGAGCCAGC
Downstream 100 bases:
>100_bases GCCGAAGCCGCGCGGTACGCCGACGCTGGGCCGGGAAACCGCTCGGCGGCGGGCGGCGCGACGCGGGCCTGACCGAACCC GGTCCCGGCCCGGAAGGCAA
Product: putative thiamine-phosphate pyrophosphorylase ThiE
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 203; Mature: 203
Protein sequence:
>203_residues MCGSEPVPTPALPPLYLITPEPASNARADLDAFVSRLDAAFATGIALVQLRVKTFDAADYAALAERVIGRAHAAGARVVC NGPVTLQAARALGADGIHFGHAALAAAASRPEAAGLLLSAACHDAASLRHADRIGADLATLSPVKPTLSHPGAPGLGWPR FAEWVAGTRLAVYALGGMTRDDLPIARAHGAHGVAGIRGLVAG
Sequences:
>Translated_203_residues MCGSEPVPTPALPPLYLITPEPASNARADLDAFVSRLDAAFATGIALVQLRVKTFDAADYAALAERVIGRAHAAGARVVC NGPVTLQAARALGADGIHFGHAALAAAASRPEAAGLLLSAACHDAASLRHADRIGADLATLSPVKPTLSHPGAPGLGWPR FAEWVAGTRLAVYALGGMTRDDLPIARAHGAHGVAGIRGLVAG >Mature_203_residues MCGSEPVPTPALPPLYLITPEPASNARADLDAFVSRLDAAFATGIALVQLRVKTFDAADYAALAERVIGRAHAAGARVVC NGPVTLQAARALGADGIHFGHAALAAAASRPEAAGLLLSAACHDAASLRHADRIGADLATLSPVKPTLSHPGAPGLGWPR FAEWVAGTRLAVYALGGMTRDDLPIARAHGAHGVAGIRGLVAG
Specific function: Unknown
COG id: COG0352
COG function: function code H; Thiamine monophosphate synthase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TMP-PPase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR022998 - InterPro: IPR003733 [H]
Pfam domain/function: PF02581 TMP-TENI [H]
EC number: NA
Molecular weight: Translated: 20566; Mature: 20566
Theoretical pI: Translated: 8.13; Mature: 8.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCGSEPVPTPALPPLYLITPEPASNARADLDAFVSRLDAAFATGIALVQLRVKTFDAADY CCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEHHHHCCCHHH AALAERVIGRAHAAGARVVCNGPVTLQAARALGADGIHFGHAALAAAASRPEAAGLLLSA HHHHHHHHHHHHCCCCEEEECCCCHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHH ACHDAASLRHADRIGADLATLSPVKPTLSHPGAPGLGWPRFAEWVAGTRLAVYALGGMTR HHHHHHHHHHHHHHCCCHHHCCCCCCHHCCCCCCCCCCHHHHHHHHCCCEEEEEECCCCC DDLPIARAHGAHGVAGIRGLVAG CCCCHHHCCCCCCHHHHHHHCCC >Mature Secondary Structure MCGSEPVPTPALPPLYLITPEPASNARADLDAFVSRLDAAFATGIALVQLRVKTFDAADY CCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEHHHHCCCHHH AALAERVIGRAHAAGARVVCNGPVTLQAARALGADGIHFGHAALAAAASRPEAAGLLLSA HHHHHHHHHHHHCCCCEEEECCCCHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHH ACHDAASLRHADRIGADLATLSPVKPTLSHPGAPGLGWPRFAEWVAGTRLAVYALGGMTR HHHHHHHHHHHHHHCCCHHHCCCCCCHHCCCCCCCCCCHHHHHHHHCCCEEEEEECCCCC DDLPIARAHGAHGVAGIRGLVAG CCCCHHHCCCCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9537320 [H]