Definition Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence.
Accession NC_012721
Length 2,827,333

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The map label for this gene is 238024974

Identifier: 238024974

GI number: 238024974

Start: 2053689

End: 2054300

Strand: Direct

Name: 238024974

Synonym: bglu_2g16310

Alternate gene names: NA

Gene position: 2053689-2054300 (Clockwise)

Preceding gene: 238024973

Following gene: 238024976

Centisome position: 72.64

GC content: 75.33

Gene sequence:

>612_bases
ATGTGCGGCTCTGAACCCGTGCCGACGCCCGCGCTGCCGCCGCTCTACCTGATCACGCCCGAGCCGGCCTCCAACGCGCG
CGCCGATCTCGACGCGTTCGTCTCTCGGCTCGACGCGGCGTTCGCCACCGGCATCGCGCTCGTGCAGTTGCGCGTGAAGA
CATTCGACGCCGCCGATTACGCGGCGCTGGCCGAGCGCGTGATCGGCCGCGCCCATGCGGCCGGCGCGCGCGTGGTCTGC
AATGGTCCGGTCACGCTGCAGGCAGCACGCGCGCTCGGCGCCGACGGCATCCATTTCGGCCACGCCGCGCTCGCCGCCGC
CGCGTCGCGGCCGGAGGCGGCCGGCCTGCTGCTGTCGGCCGCCTGCCACGACGCGGCATCGCTGCGCCACGCGGACCGCA
TCGGTGCGGACCTCGCCACGCTGTCGCCGGTGAAACCGACGCTGTCGCATCCGGGCGCGCCGGGGCTCGGCTGGCCGCGC
TTCGCCGAATGGGTGGCCGGCACGCGCCTGGCCGTCTATGCGCTCGGCGGCATGACGCGCGACGACCTGCCGATCGCGCG
CGCGCACGGGGCGCATGGCGTCGCGGGCATTCGGGGCCTGGTGGCGGGATAA

Upstream 100 bases:

>100_bases
GAACTGATGACGGACTATCGGCAGCCCGTCAACGCCGTCTATTACCGGCATGCGGCACTGACGGGCCGCGTGCAGGGTTT
CCTCGATTTCCTGAGCCAGC

Downstream 100 bases:

>100_bases
GCCGAAGCCGCGCGGTACGCCGACGCTGGGCCGGGAAACCGCTCGGCGGCGGGCGGCGCGACGCGGGCCTGACCGAACCC
GGTCCCGGCCCGGAAGGCAA

Product: putative thiamine-phosphate pyrophosphorylase ThiE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 203; Mature: 203

Protein sequence:

>203_residues
MCGSEPVPTPALPPLYLITPEPASNARADLDAFVSRLDAAFATGIALVQLRVKTFDAADYAALAERVIGRAHAAGARVVC
NGPVTLQAARALGADGIHFGHAALAAAASRPEAAGLLLSAACHDAASLRHADRIGADLATLSPVKPTLSHPGAPGLGWPR
FAEWVAGTRLAVYALGGMTRDDLPIARAHGAHGVAGIRGLVAG

Sequences:

>Translated_203_residues
MCGSEPVPTPALPPLYLITPEPASNARADLDAFVSRLDAAFATGIALVQLRVKTFDAADYAALAERVIGRAHAAGARVVC
NGPVTLQAARALGADGIHFGHAALAAAASRPEAAGLLLSAACHDAASLRHADRIGADLATLSPVKPTLSHPGAPGLGWPR
FAEWVAGTRLAVYALGGMTRDDLPIARAHGAHGVAGIRGLVAG
>Mature_203_residues
MCGSEPVPTPALPPLYLITPEPASNARADLDAFVSRLDAAFATGIALVQLRVKTFDAADYAALAERVIGRAHAAGARVVC
NGPVTLQAARALGADGIHFGHAALAAAASRPEAAGLLLSAACHDAASLRHADRIGADLATLSPVKPTLSHPGAPGLGWPR
FAEWVAGTRLAVYALGGMTRDDLPIARAHGAHGVAGIRGLVAG

Specific function: Unknown

COG id: COG0352

COG function: function code H; Thiamine monophosphate synthase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TMP-PPase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR022998
- InterPro:   IPR003733 [H]

Pfam domain/function: PF02581 TMP-TENI [H]

EC number: NA

Molecular weight: Translated: 20566; Mature: 20566

Theoretical pI: Translated: 8.13; Mature: 8.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCGSEPVPTPALPPLYLITPEPASNARADLDAFVSRLDAAFATGIALVQLRVKTFDAADY
CCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEHHHHCCCHHH
AALAERVIGRAHAAGARVVCNGPVTLQAARALGADGIHFGHAALAAAASRPEAAGLLLSA
HHHHHHHHHHHHCCCCEEEECCCCHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHH
ACHDAASLRHADRIGADLATLSPVKPTLSHPGAPGLGWPRFAEWVAGTRLAVYALGGMTR
HHHHHHHHHHHHHHCCCHHHCCCCCCHHCCCCCCCCCCHHHHHHHHCCCEEEEEECCCCC
DDLPIARAHGAHGVAGIRGLVAG
CCCCHHHCCCCCCHHHHHHHCCC
>Mature Secondary Structure
MCGSEPVPTPALPPLYLITPEPASNARADLDAFVSRLDAAFATGIALVQLRVKTFDAADY
CCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEHHHHCCCHHH
AALAERVIGRAHAAGARVVCNGPVTLQAARALGADGIHFGHAALAAAASRPEAAGLLLSA
HHHHHHHHHHHHCCCCEEEECCCCHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHH
ACHDAASLRHADRIGADLATLSPVKPTLSHPGAPGLGWPRFAEWVAGTRLAVYALGGMTR
HHHHHHHHHHHHHHCCCHHHCCCCCCHHCCCCCCCCCCHHHHHHHHCCCEEEEEECCCCC
DDLPIARAHGAHGVAGIRGLVAG
CCCCHHHCCCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]