| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238024962
Identifier: 238024962
GI number: 238024962
Start: 2041894
End: 2042700
Strand: Direct
Name: 238024962
Synonym: bglu_2g16190
Alternate gene names: NA
Gene position: 2041894-2042700 (Clockwise)
Preceding gene: 238024961
Following gene: 238024963
Centisome position: 72.22
GC content: 67.04
Gene sequence:
>807_bases ATGCAACTGATCGAAGTTCCCGCCAAGACCGGCTACGTCTGGTTCCGCCAGGGCATCTGGCTGTTCCGCCGCAATCCGCT CGCGTTCATCACGCTGTTCTTCAGCTATGTGCTGGCGATGAGGATCGTGTCGCTGGTGCCGGTGCTCGGCGCGGCGCTGC CGCTGCTGTTCATCCCCGGCATCTCGGTCGGCTTCATGGCCGCCTGCCGCGATGCCCTGGCCGGCCGGCCGGTGCTGCCG ACAATCCTGCTCGACGGCTTCCGCTCCTATGGGAAGCTGACGATGCAGCGCCTGTTTACGCTCGGCGGCCTCTACGTCGT GTCGATCGCGATCGTGTTCGCCTGCTCGGCCATGGGCGACGGCGGCACGCTGCTGCGGATCATGTTCGGCCTCGGCGTCG AGGGCCTCGATCCGGCCGCGATCTTCAACGTCGACACGCTCGTCGCGCTGCTGATTTCGGCGCTGCTCTACGTGCCGGTG TCGATGATGTTCTGGTTCGCGCCGGTACTGACCGCCTGGCACGAGATCCCCCCCGCCAAGGCGCTGTTCTTCAGCATCGT GAGCTGCTGGCGCAACCGCTGGGCGTTCACGCTGTACGGGCTGCTCTGGTTCGCGGTGGCGATCGGCGTGTCGTTCACGC TGGCCTGGCTGATGCACGCGGTGGGCGCCGGCCCCTATGCGTTGGTGGTCATGATGCCGGTCTCGTTGGTGGTCACGGCC GCGCTCTACTGCTCGTTCTACGCGACCTACCGCGGCTGCTTCGGCGTGCAGGAGCCGGGCAGCCCGGCTACACCGCCGGC GCGCTAA
Upstream 100 bases:
>100_bases GTGCCGCGGAGATGCTCAAGCCGCACGACCCGGGCCATTTCGAGCGAATCCTGCGCGAGCGCATCGCACATGCGCGGCCC CTCCCCGAGCGACACGCCCC
Downstream 100 bases:
>100_bases GCGCCGCGATCGCCCCACCCGCCGGCGCGGGTTCTCCCGGCGCCGCGCTCGCCAGCGGCGACAGTTCGGCGCAAAATCAT TAGCGTACAAGCTTTTTGTG
Product: major facilitator superfamily permease
Products: NA
Alternate protein names: Facilitator Superfamily Transporter
Number of amino acids: Translated: 268; Mature: 268
Protein sequence:
>268_residues MQLIEVPAKTGYVWFRQGIWLFRRNPLAFITLFFSYVLAMRIVSLVPVLGAALPLLFIPGISVGFMAACRDALAGRPVLP TILLDGFRSYGKLTMQRLFTLGGLYVVSIAIVFACSAMGDGGTLLRIMFGLGVEGLDPAAIFNVDTLVALLISALLYVPV SMMFWFAPVLTAWHEIPPAKALFFSIVSCWRNRWAFTLYGLLWFAVAIGVSFTLAWLMHAVGAGPYALVVMMPVSLVVTA ALYCSFYATYRGCFGVQEPGSPATPPAR
Sequences:
>Translated_268_residues MQLIEVPAKTGYVWFRQGIWLFRRNPLAFITLFFSYVLAMRIVSLVPVLGAALPLLFIPGISVGFMAACRDALAGRPVLP TILLDGFRSYGKLTMQRLFTLGGLYVVSIAIVFACSAMGDGGTLLRIMFGLGVEGLDPAAIFNVDTLVALLISALLYVPV SMMFWFAPVLTAWHEIPPAKALFFSIVSCWRNRWAFTLYGLLWFAVAIGVSFTLAWLMHAVGAGPYALVVMMPVSLVVTA ALYCSFYATYRGCFGVQEPGSPATPPAR >Mature_268_residues MQLIEVPAKTGYVWFRQGIWLFRRNPLAFITLFFSYVLAMRIVSLVPVLGAALPLLFIPGISVGFMAACRDALAGRPVLP TILLDGFRSYGKLTMQRLFTLGGLYVVSIAIVFACSAMGDGGTLLRIMFGLGVEGLDPAAIFNVDTLVALLISALLYVPV SMMFWFAPVLTAWHEIPPAKALFFSIVSCWRNRWAFTLYGLLWFAVAIGVSFTLAWLMHAVGAGPYALVVMMPVSLVVTA ALYCSFYATYRGCFGVQEPGSPATPPAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29254; Mature: 29254
Theoretical pI: Translated: 9.38; Mature: 9.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLIEVPAKTGYVWFRQGIWLFRRNPLAFITLFFSYVLAMRIVSLVPVLGAALPLLFIPG CCCEECCCCCCHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC ISVGFMAACRDALAGRPVLPTILLDGFRSYGKLTMQRLFTLGGLYVVSIAIVFACSAMGD CHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC GGTLLRIMFGLGVEGLDPAAIFNVDTLVALLISALLYVPVSMMFWFAPVLTAWHEIPPAK CHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH ALFFSIVSCWRNRWAFTLYGLLWFAVAIGVSFTLAWLMHAVGAGPYALVVMMPVSLVVTA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH ALYCSFYATYRGCFGVQEPGSPATPPAR HHHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MQLIEVPAKTGYVWFRQGIWLFRRNPLAFITLFFSYVLAMRIVSLVPVLGAALPLLFIPG CCCEECCCCCCHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC ISVGFMAACRDALAGRPVLPTILLDGFRSYGKLTMQRLFTLGGLYVVSIAIVFACSAMGD CHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC GGTLLRIMFGLGVEGLDPAAIFNVDTLVALLISALLYVPVSMMFWFAPVLTAWHEIPPAK CHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH ALFFSIVSCWRNRWAFTLYGLLWFAVAIGVSFTLAWLMHAVGAGPYALVVMMPVSLVVTA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH ALYCSFYATYRGCFGVQEPGSPATPPAR HHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA