| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is thrB [H]
Identifier: 238024961
GI number: 238024961
Start: 2040905
End: 2041903
Strand: Direct
Name: thrB [H]
Synonym: bglu_2g16180
Alternate gene names: 238024961
Gene position: 2040905-2041903 (Clockwise)
Preceding gene: 238024960
Following gene: 238024962
Centisome position: 72.18
GC content: 67.77
Gene sequence:
>999_bases ATGGCTGTCTTCACCGCAGTTTCCGACTCCGATCTCGCGCAATGGATGCGCCACTACGATCTCGGCGAAGTCGTCGCGTT TCGCGGCATTCCGTCCGGTATCGAGAACAGCAATTTTTTCCTGACGACCACGCGCGGCGAATACGTTCTTACCCTGTTCG AGAAGCTGACCTCCACGCAACTGCCGTTCTATCTGGAACTGATGCGCCATCTCGCGCGGCACGGCGTGCCGGTGCCGGAC CCGGTCGAGCGCACCGACGGCACGCTGTTCGGCGAGTTGCACGGCAAGCCGGCCGCGATCGTCACGAAGCTCGAGGGCTC GGCCGAGCTCGCGCCCGGCGAAGCCCACTGCATCGAGGTCGGGCAGATGCTCGCGCGCATGCATCTGGCGGGCCGCGACT ACGCGAACCGCCAGCCGAACCTGCGCAGCCTGCCGTGGTGGCGCGAGAACGTGCCGGCGATCGCGCCGTTCGTCGACGCC GGCCAGCGCGCGCTGCTGGAAGGCGAACTCGCGCATCAGCAGCGCTTCTTCGCCTCCGCCGACTACGCGGCGCTGCCCGA AGGCCCGTGCCACTGCGACCTGTTCCGCGACAACGTGCTGTTCGCCAGCGCGGCACCGGATACCGGCCAGGCACTGCGCC TTGGCGGCTTCTTCGATTTCTATTTCGCCGGCTGCGACAAATGGCTGTTCGACGTGGCCGTGACCGTCAACGACTGGTGC TCCGACCTCGCCACGGGGGCGCTCGACGCCGAACGCGCCGACGCGCTGCTGCGCGCCTATCAGACGGTGCGCCCGTTCAC CGACGACGAGCGCCGCCATTGGCCCGACATGCTGCGCGCGGGCGCGTACCGCTTCTGGGTGTCGCGCCTGTATGATTTCC ACCTGCCCCGTGCCGCGGAGATGCTCAAGCCGCACGACCCGGGCCATTTCGAGCGAATCCTGCGCGAGCGCATCGCACAT GCGCGGCCCCTCCCCGAGCGACACGCCCCATGCAACTGA
Upstream 100 bases:
>100_bases CCACCGCGCCCGGCAGCGCCCGCCCGCCGGGGCGGCGAGCCCGCCTTCTCCGCAGCCGCCGGCGCCCGCCGGCCTGCCAA CCCGTTTCGACGCACCCCGC
Downstream 100 bases:
>100_bases TCGAAGTTCCCGCCAAGACCGGCTACGTCTGGTTCCGCCAGGGCATCTGGCTGTTCCGCCGCAATCCGCTCGCGTTCATC ACGCTGTTCTTCAGCTATGT
Product: homoserine kinase
Products: NA
Alternate protein names: HK; HSK [H]
Number of amino acids: Translated: 332; Mature: 331
Protein sequence:
>332_residues MAVFTAVSDSDLAQWMRHYDLGEVVAFRGIPSGIENSNFFLTTTRGEYVLTLFEKLTSTQLPFYLELMRHLARHGVPVPD PVERTDGTLFGELHGKPAAIVTKLEGSAELAPGEAHCIEVGQMLARMHLAGRDYANRQPNLRSLPWWRENVPAIAPFVDA GQRALLEGELAHQQRFFASADYAALPEGPCHCDLFRDNVLFASAAPDTGQALRLGGFFDFYFAGCDKWLFDVAVTVNDWC SDLATGALDAERADALLRAYQTVRPFTDDERRHWPDMLRAGAYRFWVSRLYDFHLPRAAEMLKPHDPGHFERILRERIAH ARPLPERHAPCN
Sequences:
>Translated_332_residues MAVFTAVSDSDLAQWMRHYDLGEVVAFRGIPSGIENSNFFLTTTRGEYVLTLFEKLTSTQLPFYLELMRHLARHGVPVPD PVERTDGTLFGELHGKPAAIVTKLEGSAELAPGEAHCIEVGQMLARMHLAGRDYANRQPNLRSLPWWRENVPAIAPFVDA GQRALLEGELAHQQRFFASADYAALPEGPCHCDLFRDNVLFASAAPDTGQALRLGGFFDFYFAGCDKWLFDVAVTVNDWC SDLATGALDAERADALLRAYQTVRPFTDDERRHWPDMLRAGAYRFWVSRLYDFHLPRAAEMLKPHDPGHFERILRERIAH ARPLPERHAPCN >Mature_331_residues AVFTAVSDSDLAQWMRHYDLGEVVAFRGIPSGIENSNFFLTTTRGEYVLTLFEKLTSTQLPFYLELMRHLARHGVPVPDP VERTDGTLFGELHGKPAAIVTKLEGSAELAPGEAHCIEVGQMLARMHLAGRDYANRQPNLRSLPWWRENVPAIAPFVDAG QRALLEGELAHQQRFFASADYAALPEGPCHCDLFRDNVLFASAAPDTGQALRLGGFFDFYFAGCDKWLFDVAVTVNDWCS DLATGALDAERADALLRAYQTVRPFTDDERRHWPDMLRAGAYRFWVSRLYDFHLPRAAEMLKPHDPGHFERILRERIAHA RPLPERHAPCN
Specific function: Unknown
COG id: COG2334
COG function: function code R; Putative homoserine kinase type II (protein kinase fold)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pseudomonas-type thrB family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002575 - InterPro: IPR005280 - InterPro: IPR011009 [H]
Pfam domain/function: PF01636 APH [H]
EC number: =2.7.1.39 [H]
Molecular weight: Translated: 37477; Mature: 37346
Theoretical pI: Translated: 6.15; Mature: 6.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVFTAVSDSDLAQWMRHYDLGEVVAFRGIPSGIENSNFFLTTTRGEYVLTLFEKLTSTQ CEEEEECCCHHHHHHHHHCCHHHHHHHCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCC LPFYLELMRHLARHGVPVPDPVERTDGTLFGELHGKPAAIVTKLEGSAELAPGEAHCIEV CCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCCCCCCHHHHHHH GQMLARMHLAGRDYANRQPNLRSLPWWRENVPAIAPFVDAGQRALLEGELAHQQRFFASA HHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCHHHHCCCHHHHHHHHHHHHHHHHCC DYAALPEGPCHCDLFRDNVLFASAAPDTGQALRLGGFFDFYFAGCDKWLFDVAVTVNDWC CCCCCCCCCCEEEEECCCEEEEECCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHH SDLATGALDAERADALLRAYQTVRPFTDDERRHWPDMLRAGAYRFWVSRLYDFHLPRAAE HHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH MLKPHDPGHFERILRERIAHARPLPERHAPCN HCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure AVFTAVSDSDLAQWMRHYDLGEVVAFRGIPSGIENSNFFLTTTRGEYVLTLFEKLTSTQ EEEEECCCHHHHHHHHHCCHHHHHHHCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCC LPFYLELMRHLARHGVPVPDPVERTDGTLFGELHGKPAAIVTKLEGSAELAPGEAHCIEV CCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCCCCCCHHHHHHH GQMLARMHLAGRDYANRQPNLRSLPWWRENVPAIAPFVDAGQRALLEGELAHQQRFFASA HHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCHHHHCCCHHHHHHHHHHHHHHHHCC DYAALPEGPCHCDLFRDNVLFASAAPDTGQALRLGGFFDFYFAGCDKWLFDVAVTVNDWC CCCCCCCCCCEEEEECCCEEEEECCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHH SDLATGALDAERADALLRAYQTVRPFTDDERRHWPDMLRAGAYRFWVSRLYDFHLPRAAE HHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH MLKPHDPGHFERILRERIAHARPLPERHAPCN HCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA