| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238024919
Identifier: 238024919
GI number: 238024919
Start: 1987280
End: 1987876
Strand: Direct
Name: 238024919
Synonym: bglu_2g15640
Alternate gene names: NA
Gene position: 1987280-1987876 (Clockwise)
Preceding gene: 238024918
Following gene: 238024920
Centisome position: 70.29
GC content: 64.32
Gene sequence:
>597_bases ATGTGCAATCTTACTGTCGTCAGGCGGCTCGCCGGAGCCGCGGCCCTGGTCTTGTCGGTCGCGGCCGCCGCACACCCGCA TGTGTGGATCCGGTATGCGGCGCGCGTGCAGATGCAGGGCACGGCCGTGACCGCCATCGCCGAAACCTGGCGTTTCTCGG CAGGCTTCCCGGTGCAGATCGTCGGCATCGACACGTTGCCCGATAACGGGCCGCTCGATGCCAGGCAAACCGAAATCTTC CGCAAGCAGGCGTTTTCCTCGCTCGAGGGCGCGCAGTATTTCAGCCACCTGTTCGTCAACGGCGAAGCGCAGCCGTTCGG CGAGCCGACCGGCTTTCGCGTGTCGATCGATCACGGCAAGCTTGTTTACACGTTTACGCTGCCGCTCAAGGCACCGGTGG ATGCCAGCAGCGCGCGCAAGGTGTCGCTCGGCATCTGGGACGACTCCTTCTTCGTGGATTACGAACCGAACGGCACGACG CCCGTGACGCTGGAAGGCCGTCCCGCCGCCACCTGCACCGCGAAGGCGTTCCAGGATCGCGCGCATCCCATCTTCAACGG CCTCTATCTACCGCAGGCATTTGCCTTGTCATGCTGA
Upstream 100 bases:
>100_bases CAACACCCGCGCCGCTTTCGGCCGAAGCCCCGCTATACTCGCGTCGTCGCGCGCAGCGAGGCGCGGCGCCTCGGCCTGCC GGAACCAACAATCGAAAGCG
Downstream 100 bases:
>100_bases ATTTTTCGCGGCCCGCGCTGGCTTTTTTCCTTGCGTGCTGCGTGGCCCTCGCGGGCATCGGCTGCGCGACGCCGTCGTGC GCTGCCGCGCCCACCGTCGA
Product: ABC transporter periplasmic component-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 198; Mature: 198
Protein sequence:
>198_residues MCNLTVVRRLAGAAALVLSVAAAAHPHVWIRYAARVQMQGTAVTAIAETWRFSAGFPVQIVGIDTLPDNGPLDARQTEIF RKQAFSSLEGAQYFSHLFVNGEAQPFGEPTGFRVSIDHGKLVYTFTLPLKAPVDASSARKVSLGIWDDSFFVDYEPNGTT PVTLEGRPAATCTAKAFQDRAHPIFNGLYLPQAFALSC
Sequences:
>Translated_198_residues MCNLTVVRRLAGAAALVLSVAAAAHPHVWIRYAARVQMQGTAVTAIAETWRFSAGFPVQIVGIDTLPDNGPLDARQTEIF RKQAFSSLEGAQYFSHLFVNGEAQPFGEPTGFRVSIDHGKLVYTFTLPLKAPVDASSARKVSLGIWDDSFFVDYEPNGTT PVTLEGRPAATCTAKAFQDRAHPIFNGLYLPQAFALSC >Mature_198_residues MCNLTVVRRLAGAAALVLSVAAAAHPHVWIRYAARVQMQGTAVTAIAETWRFSAGFPVQIVGIDTLPDNGPLDARQTEIF RKQAFSSLEGAQYFSHLFVNGEAQPFGEPTGFRVSIDHGKLVYTFTLPLKAPVDASSARKVSLGIWDDSFFVDYEPNGTT PVTLEGRPAATCTAKAFQDRAHPIFNGLYLPQAFALSC
Specific function: Unknown
COG id: COG3683
COG function: function code R; ABC-type uncharacterized transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21460; Mature: 21460
Theoretical pI: Translated: 7.56; Mature: 7.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCNLTVVRRLAGAAALVLSVAAAAHPHVWIRYAARVQMQGTAVTAIAETWRFSAGFPVQI CCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEECCCEEEEEHHHHCCCCCCCEEE VGIDTLPDNGPLDARQTEIFRKQAFSSLEGAQYFSHLFVNGEAQPFGEPTGFRVSIDHGK EEEEECCCCCCCCHHHHHHHHHHHHHHCCHHHHHEEEEECCCCCCCCCCCCEEEEECCCE LVYTFTLPLKAPVDASSARKVSLGIWDDSFFVDYEPNGTTPVTLEGRPAATCTAKAFQDR EEEEEEECCCCCCCCCCCCEEEEEEECCCEEEEECCCCCEEEEECCCCCCEEHHHHHHHC AHPIFNGLYLPQAFALSC CCHHHCCEECCCEEECCC >Mature Secondary Structure MCNLTVVRRLAGAAALVLSVAAAAHPHVWIRYAARVQMQGTAVTAIAETWRFSAGFPVQI CCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEECCCEEEEEHHHHCCCCCCCEEE VGIDTLPDNGPLDARQTEIFRKQAFSSLEGAQYFSHLFVNGEAQPFGEPTGFRVSIDHGK EEEEECCCCCCCCHHHHHHHHHHHHHHCCHHHHHEEEEECCCCCCCCCCCCEEEEECCCE LVYTFTLPLKAPVDASSARKVSLGIWDDSFFVDYEPNGTTPVTLEGRPAATCTAKAFQDR EEEEEEECCCCCCCCCCCCEEEEEEECCCEEEEECCCCCEEEEECCCCCCEEHHHHHHHC AHPIFNGLYLPQAFALSC CCHHHCCEECCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA