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The map label for this gene is yecS [H]

Identifier: 238024848

GI number: 238024848

Start: 1892012

End: 1892662

Strand: Direct

Name: yecS [H]

Synonym: bglu_2g14880

Alternate gene names: 238024848

Gene position: 1892012-1892662 (Clockwise)

Preceding gene: 238024847

Following gene: 238024849

Centisome position: 66.92

GC content: 68.05

Gene sequence:

>651_bases
ATGATCGAGTTCACGTTCGGGCAGATCCTCGCCAACCTGCTGCTCGCGGCGCGCTGGACGGTGCAGCTCTCGCTCGTCTC
GTTCGCGCTCGGCGGCACGCTCGCGCTGCTGCTGCTGGCGCTGCGGGTATCGAGGCACGTCGCGCTGCGCGGCCTCGTGA
AGTGCTACATCGAGGTGTTCCAGGGCACGCCGCTGCTGATGCAGCTGTTCGTGGTGTTCTTCGGGCTGCCGCTCGTCGGC
CTCGACGTGCCGCCGTGGCTGGCCGCCACGCTCGGCCTCACGTTCTTCACCAGCGCCTACCTGGCGGAGATCTGGCGCGG
CTGCGTCGAGGCGGTGCCGCGCGGCCAGTGGGAAGCGTCGGCCAGCCTCGCGATGAGCTATCTCGAGCAGCTGCGCCACG
TGATCCTGCCGCAGGCCGCGCGCATCGCCGTCGGGCCGACGGTCGGCTTCGGCGTGCAGGCGATCAAGGACACCGCGCTG
GTCTCGATCATCGGCTTCACCGAGTTGACGAAGGCCGGCACCATGATCTCGAATGCCACGTTCCGGCCATTCCTGGTCTA
CGGCCTGGTCGCCCTCATCTATTTCGCGCTCTGCTACCCGCTGACCCGCTGGGCGCGCTCGCTGCAAAGGAAATGGCATG
CCGCTCGTTGA

Upstream 100 bases:

>100_bases
TCGTGATCACGCTCGCCTATCTCGCGATGGCGCTGCTGCTGCGCGCGGCGCTCAACACGGCGGGCCGCCGGCTGTTCGCG
CGCGGCGCGGGAGGCGCGCG

Downstream 100 bases:

>100_bases
AACCCGGGGCCTCGAAAAGAACTTCGGCCCGAACCATGTGCTGAAAGGCATCGACTTCAGCGTCGAACGCGGCCAGGTGG
TGAGCATCATCGGCCGCAGC

Product: amino acid ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 216; Mature: 216

Protein sequence:

>216_residues
MIEFTFGQILANLLLAARWTVQLSLVSFALGGTLALLLLALRVSRHVALRGLVKCYIEVFQGTPLLMQLFVVFFGLPLVG
LDVPPWLAATLGLTFFTSAYLAEIWRGCVEAVPRGQWEASASLAMSYLEQLRHVILPQAARIAVGPTVGFGVQAIKDTAL
VSIIGFTELTKAGTMISNATFRPFLVYGLVALIYFALCYPLTRWARSLQRKWHAAR

Sequences:

>Translated_216_residues
MIEFTFGQILANLLLAARWTVQLSLVSFALGGTLALLLLALRVSRHVALRGLVKCYIEVFQGTPLLMQLFVVFFGLPLVG
LDVPPWLAATLGLTFFTSAYLAEIWRGCVEAVPRGQWEASASLAMSYLEQLRHVILPQAARIAVGPTVGFGVQAIKDTAL
VSIIGFTELTKAGTMISNATFRPFLVYGLVALIYFALCYPLTRWARSLQRKWHAAR
>Mature_216_residues
MIEFTFGQILANLLLAARWTVQLSLVSFALGGTLALLLLALRVSRHVALRGLVKCYIEVFQGTPLLMQLFVVFFGLPLVG
LDVPPWLAATLGLTFFTSAYLAEIWRGCVEAVPRGQWEASASLAMSYLEQLRHVILPQAARIAVGPTVGFGVQAIKDTAL
VSIIGFTELTKAGTMISNATFRPFLVYGLVALIYFALCYPLTRWARSLQRKWHAAR

Specific function: Probably part of the binding-protein-dependent transport system yecCS for an amino acid; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0765

COG function: function code E; ABC-type amino acid transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788226, Length=186, Percent_Identity=37.6344086021505, Blast_Score=131, Evalue=3e-32,
Organism=Escherichia coli, GI1787030, Length=206, Percent_Identity=33.9805825242718, Blast_Score=102, Evalue=2e-23,
Organism=Escherichia coli, GI87082239, Length=208, Percent_Identity=34.1346153846154, Blast_Score=99, Evalue=1e-22,
Organism=Escherichia coli, GI1788645, Length=203, Percent_Identity=31.5270935960591, Blast_Score=89, Evalue=2e-19,
Organism=Escherichia coli, GI1787086, Length=214, Percent_Identity=28.0373831775701, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1788646, Length=198, Percent_Identity=29.7979797979798, Blast_Score=79, Evalue=2e-16,
Organism=Escherichia coli, GI48994930, Length=97, Percent_Identity=38.1443298969072, Blast_Score=71, Evalue=7e-14,
Organism=Escherichia coli, GI1786874, Length=172, Percent_Identity=26.1627906976744, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1786873, Length=222, Percent_Identity=23.8738738738739, Blast_Score=68, Evalue=5e-13,
Organism=Escherichia coli, GI1787087, Length=125, Percent_Identity=33.6, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 23787; Mature: 23787

Theoretical pI: Translated: 10.18; Mature: 10.18

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEFTFGQILANLLLAARWTVQLSLVSFALGGTLALLLLALRVSRHVALRGLVKCYIEVF
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QGTPLLMQLFVVFFGLPLVGLDVPPWLAATLGLTFFTSAYLAEIWRGCVEAVPRGQWEAS
CCCHHHHHHHHHHHCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
ASLAMSYLEQLRHVILPQAARIAVGPTVGFGVQAIKDTALVSIIGFTELTKAGTMISNAT
HHHHHHHHHHHHHHHCCCHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
FRPFLVYGLVALIYFALCYPLTRWARSLQRKWHAAR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MIEFTFGQILANLLLAARWTVQLSLVSFALGGTLALLLLALRVSRHVALRGLVKCYIEVF
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QGTPLLMQLFVVFFGLPLVGLDVPPWLAATLGLTFFTSAYLAEIWRGCVEAVPRGQWEAS
CCCHHHHHHHHHHHCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
ASLAMSYLEQLRHVILPQAARIAVGPTVGFGVQAIKDTALVSIIGFTELTKAGTMISNAT
HHHHHHHHHHHHHHHCCCHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
FRPFLVYGLVALIYFALCYPLTRWARSLQRKWHAAR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]