| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
Click here to switch to the map view.
The map label for this gene is adhB [H]
Identifier: 238024845
GI number: 238024845
Start: 1887992
End: 1889176
Strand: Direct
Name: adhB [H]
Synonym: bglu_2g14850
Alternate gene names: 238024845
Gene position: 1887992-1889176 (Clockwise)
Preceding gene: 238024841
Following gene: 238024846
Centisome position: 66.78
GC content: 72.07
Gene sequence:
>1185_bases ATGCAAGCGTTTTCGTTTCAGACCGTCGCGCACATCGTGCTCGAGGCCGGCATCGCCAAACGTCTCGGCCAGGCGCTGCG CGAGCGCCATGCGGGCCGCCGCGCCTGCGTCGTCACCGACGCATTCCTCCATCGCGGCGGCACGCTGGCGCCGGCGCTCG CGAGCCTCGGCGCGGCGGGCTGGGAAGTGCTGGTGATCGACGAGGTGGTGGCCGATCCGCCCGACGAGGTGGTGCGCGAC GCCGCCCGCCGCGCGCGCGAGTTCGGCGCCGAACTCGTGATCGGGCTGGGCGGCGGCTCGTCGATGGACGTCGCGAAGCT GGTGGCCGTGCTCGGCGCGAGCGCGCAGCCGCTCGAGCAGATGTACGGCGTGAACCGCGTGCAGGGCACCCGCCTGCCGC TGGTGCAGATTCCCACCACGGCCGGCACCGGCTCCGAGGTCACGCCGATCGCGATCGTGACCACCGGCAAGACCACCAAG AGCGGCGTGGTGGCGCCGCAGCTCTATGCCGACGCCGCCTACCTCGATCCCGAGCTGACCGTCGGGCTGCCGCCCGCCGC GACGGCCGCCACCGGCATCGACGCGATGGTCCACGCGATCGAGGCCTACACCAGCAAGCGGCTGAAGAATCCGCTGTCCG ATCATCTCGCCGGCAAGGCGCTCCAGCTGCTGAGCGCGAACCTGCTGCCGGCCTGCCGCGACGGCGGCGATCTCGCGGCG CGCTCGGCCATGCTGCTCGGCGCGATGCTGGCCGGGCAGGCGTTCGCGAACGCGCCGGTGGCCGGCGTCCACGCGCTCGC CTATCCGATCGGCGGGGTGTTCCATGTGCCGCACGGGCTGTCGAACGCGCTGGTGCTGCCGCACGTGCTGCGCTTCAATG CGCGCGTGCCCGCCGCCGCGCAGGCCTATGCCGAACTGGGCCAGCTCATCGGGCTCCAGCCGGCAGGCTCGTTCGACGAG CAGGCCGAGGCCTTCATCGCCCATCTGGTGCGGCTCGCGCGCGACGCCGGGCTGCCGTCGAACCTGCAGGCCGTGGGCAT CGGCGTGGCCGATCTGGGCGGCCTCGCGGCCGACGCGATGAAGCAGGAGCGGCTGCTGATCAACAATCCCTGCGAGATCG ACGAGCCGAGCGCGCTCGAGATCTACCGGCAGGCCTTCGAGCATACCTACGACGAGCTCGCGTAA
Upstream 100 bases:
>100_bases GCGCCGGAACTGCGCAATCGCCGGGCCGCCGGTATCATGGCCTGGCGCCGGCGGGGGCCAGGCCCGCGCCGCCTAACGAA ACCTGCCGGGGGCAGACATC
Downstream 100 bases:
>100_bases GGCCGGCAGGACGGCGGCGGCACGGCCGCGGGCGTCCGGGCCTGGGCGTCGCGCGGCGCCGAAACGAGATGCGGCCTCAT GCGCTCGCCCGCAGGCCGGA
Product: alcohol dehydrogenase
Products: NA
Alternate protein names: Alcohol dehydrogenase II; ADH II [H]
Number of amino acids: Translated: 394; Mature: 394
Protein sequence:
>394_residues MQAFSFQTVAHIVLEAGIAKRLGQALRERHAGRRACVVTDAFLHRGGTLAPALASLGAAGWEVLVIDEVVADPPDEVVRD AARRAREFGAELVIGLGGGSSMDVAKLVAVLGASAQPLEQMYGVNRVQGTRLPLVQIPTTAGTGSEVTPIAIVTTGKTTK SGVVAPQLYADAAYLDPELTVGLPPAATAATGIDAMVHAIEAYTSKRLKNPLSDHLAGKALQLLSANLLPACRDGGDLAA RSAMLLGAMLAGQAFANAPVAGVHALAYPIGGVFHVPHGLSNALVLPHVLRFNARVPAAAQAYAELGQLIGLQPAGSFDE QAEAFIAHLVRLARDAGLPSNLQAVGIGVADLGGLAADAMKQERLLINNPCEIDEPSALEIYRQAFEHTYDELA
Sequences:
>Translated_394_residues MQAFSFQTVAHIVLEAGIAKRLGQALRERHAGRRACVVTDAFLHRGGTLAPALASLGAAGWEVLVIDEVVADPPDEVVRD AARRAREFGAELVIGLGGGSSMDVAKLVAVLGASAQPLEQMYGVNRVQGTRLPLVQIPTTAGTGSEVTPIAIVTTGKTTK SGVVAPQLYADAAYLDPELTVGLPPAATAATGIDAMVHAIEAYTSKRLKNPLSDHLAGKALQLLSANLLPACRDGGDLAA RSAMLLGAMLAGQAFANAPVAGVHALAYPIGGVFHVPHGLSNALVLPHVLRFNARVPAAAQAYAELGQLIGLQPAGSFDE QAEAFIAHLVRLARDAGLPSNLQAVGIGVADLGGLAADAMKQERLLINNPCEIDEPSALEIYRQAFEHTYDELA >Mature_394_residues MQAFSFQTVAHIVLEAGIAKRLGQALRERHAGRRACVVTDAFLHRGGTLAPALASLGAAGWEVLVIDEVVADPPDEVVRD AARRAREFGAELVIGLGGGSSMDVAKLVAVLGASAQPLEQMYGVNRVQGTRLPLVQIPTTAGTGSEVTPIAIVTTGKTTK SGVVAPQLYADAAYLDPELTVGLPPAATAATGIDAMVHAIEAYTSKRLKNPLSDHLAGKALQLLSANLLPACRDGGDLAA RSAMLLGAMLAGQAFANAPVAGVHALAYPIGGVFHVPHGLSNALVLPHVLRFNARVPAAAQAYAELGQLIGLQPAGSFDE QAEAFIAHLVRLARDAGLPSNLQAVGIGVADLGGLAADAMKQERLLINNPCEIDEPSALEIYRQAFEHTYDELA
Specific function: Unknown
COG id: COG1454
COG function: function code C; Alcohol dehydrogenase, class IV
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the iron-containing alcohol dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI133922590, Length=412, Percent_Identity=28.8834951456311, Blast_Score=120, Evalue=2e-27, Organism=Escherichia coli, GI48994951, Length=355, Percent_Identity=34.9295774647887, Blast_Score=187, Evalue=1e-48, Organism=Escherichia coli, GI1789163, Length=363, Percent_Identity=32.2314049586777, Blast_Score=181, Evalue=7e-47, Organism=Escherichia coli, GI1787493, Length=359, Percent_Identity=34.2618384401114, Blast_Score=172, Evalue=3e-44, Organism=Escherichia coli, GI87082107, Length=336, Percent_Identity=37.202380952381, Blast_Score=171, Evalue=7e-44, Organism=Escherichia coli, GI1789386, Length=359, Percent_Identity=24.5125348189415, Blast_Score=75, Evalue=6e-15, Organism=Caenorhabditis elegans, GI17537053, Length=400, Percent_Identity=25, Blast_Score=102, Evalue=3e-22, Organism=Saccharomyces cerevisiae, GI6321181, Length=367, Percent_Identity=34.3324250681199, Blast_Score=201, Evalue=2e-52, Organism=Drosophila melanogaster, GI24657991, Length=426, Percent_Identity=30.5164319248826, Blast_Score=129, Evalue=4e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001670 - InterPro: IPR018211 [H]
Pfam domain/function: PF00465 Fe-ADH [H]
EC number: =1.1.1.1 [H]
Molecular weight: Translated: 40885; Mature: 40885
Theoretical pI: Translated: 5.95; Mature: 5.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQAFSFQTVAHIVLEAGIAKRLGQALRERHAGRRACVVTDAFLHRGGTLAPALASLGAAG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHCCCCHHHHHHHCCCCC WEVLVIDEVVADPPDEVVRDAARRAREFGAELVIGLGGGSSMDVAKLVAVLGASAQPLEQ CEEEEEHHHHCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHCCCCCHHHH MYGVNRVQGTRLPLVQIPTTAGTGSEVTPIAIVTTGKTTKSGVVAPQLYADAAYLDPELT HHCCCCCCCCCCCEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCE VGLPPAATAATGIDAMVHAIEAYTSKRLKNPLSDHLAGKALQLLSANLLPACRDGGDLAA ECCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH RSAMLLGAMLAGQAFANAPVAGVHALAYPIGGVFHVPHGLSNALVLPHVLRFNARVPAAA HHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHCCCCCHHH QAYAELGQLIGLQPAGSFDEQAEAFIAHLVRLARDAGLPSNLQAVGIGVADLGGLAADAM HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEECCHHHHHHHHHHHH KQERLLINNPCEIDEPSALEIYRQAFEHTYDELA HHCCCEECCCCCCCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MQAFSFQTVAHIVLEAGIAKRLGQALRERHAGRRACVVTDAFLHRGGTLAPALASLGAAG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHCCCCHHHHHHHCCCCC WEVLVIDEVVADPPDEVVRDAARRAREFGAELVIGLGGGSSMDVAKLVAVLGASAQPLEQ CEEEEEHHHHCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHCCCCCHHHH MYGVNRVQGTRLPLVQIPTTAGTGSEVTPIAIVTTGKTTKSGVVAPQLYADAAYLDPELT HHCCCCCCCCCCCEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCE VGLPPAATAATGIDAMVHAIEAYTSKRLKNPLSDHLAGKALQLLSANLLPACRDGGDLAA ECCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH RSAMLLGAMLAGQAFANAPVAGVHALAYPIGGVFHVPHGLSNALVLPHVLRFNARVPAAA HHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHCCCCCHHH QAYAELGQLIGLQPAGSFDEQAEAFIAHLVRLARDAGLPSNLQAVGIGVADLGGLAADAM HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEECCHHHHHHHHHHHH KQERLLINNPCEIDEPSALEIYRQAFEHTYDELA HHCCCEECCCCCCCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3584063; 2308827; 2935393 [H]