Definition Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence.
Accession NC_012721
Length 2,827,333

Click here to switch to the map view.

The map label for this gene is adhB [H]

Identifier: 238024845

GI number: 238024845

Start: 1887992

End: 1889176

Strand: Direct

Name: adhB [H]

Synonym: bglu_2g14850

Alternate gene names: 238024845

Gene position: 1887992-1889176 (Clockwise)

Preceding gene: 238024841

Following gene: 238024846

Centisome position: 66.78

GC content: 72.07

Gene sequence:

>1185_bases
ATGCAAGCGTTTTCGTTTCAGACCGTCGCGCACATCGTGCTCGAGGCCGGCATCGCCAAACGTCTCGGCCAGGCGCTGCG
CGAGCGCCATGCGGGCCGCCGCGCCTGCGTCGTCACCGACGCATTCCTCCATCGCGGCGGCACGCTGGCGCCGGCGCTCG
CGAGCCTCGGCGCGGCGGGCTGGGAAGTGCTGGTGATCGACGAGGTGGTGGCCGATCCGCCCGACGAGGTGGTGCGCGAC
GCCGCCCGCCGCGCGCGCGAGTTCGGCGCCGAACTCGTGATCGGGCTGGGCGGCGGCTCGTCGATGGACGTCGCGAAGCT
GGTGGCCGTGCTCGGCGCGAGCGCGCAGCCGCTCGAGCAGATGTACGGCGTGAACCGCGTGCAGGGCACCCGCCTGCCGC
TGGTGCAGATTCCCACCACGGCCGGCACCGGCTCCGAGGTCACGCCGATCGCGATCGTGACCACCGGCAAGACCACCAAG
AGCGGCGTGGTGGCGCCGCAGCTCTATGCCGACGCCGCCTACCTCGATCCCGAGCTGACCGTCGGGCTGCCGCCCGCCGC
GACGGCCGCCACCGGCATCGACGCGATGGTCCACGCGATCGAGGCCTACACCAGCAAGCGGCTGAAGAATCCGCTGTCCG
ATCATCTCGCCGGCAAGGCGCTCCAGCTGCTGAGCGCGAACCTGCTGCCGGCCTGCCGCGACGGCGGCGATCTCGCGGCG
CGCTCGGCCATGCTGCTCGGCGCGATGCTGGCCGGGCAGGCGTTCGCGAACGCGCCGGTGGCCGGCGTCCACGCGCTCGC
CTATCCGATCGGCGGGGTGTTCCATGTGCCGCACGGGCTGTCGAACGCGCTGGTGCTGCCGCACGTGCTGCGCTTCAATG
CGCGCGTGCCCGCCGCCGCGCAGGCCTATGCCGAACTGGGCCAGCTCATCGGGCTCCAGCCGGCAGGCTCGTTCGACGAG
CAGGCCGAGGCCTTCATCGCCCATCTGGTGCGGCTCGCGCGCGACGCCGGGCTGCCGTCGAACCTGCAGGCCGTGGGCAT
CGGCGTGGCCGATCTGGGCGGCCTCGCGGCCGACGCGATGAAGCAGGAGCGGCTGCTGATCAACAATCCCTGCGAGATCG
ACGAGCCGAGCGCGCTCGAGATCTACCGGCAGGCCTTCGAGCATACCTACGACGAGCTCGCGTAA

Upstream 100 bases:

>100_bases
GCGCCGGAACTGCGCAATCGCCGGGCCGCCGGTATCATGGCCTGGCGCCGGCGGGGGCCAGGCCCGCGCCGCCTAACGAA
ACCTGCCGGGGGCAGACATC

Downstream 100 bases:

>100_bases
GGCCGGCAGGACGGCGGCGGCACGGCCGCGGGCGTCCGGGCCTGGGCGTCGCGCGGCGCCGAAACGAGATGCGGCCTCAT
GCGCTCGCCCGCAGGCCGGA

Product: alcohol dehydrogenase

Products: NA

Alternate protein names: Alcohol dehydrogenase II; ADH II [H]

Number of amino acids: Translated: 394; Mature: 394

Protein sequence:

>394_residues
MQAFSFQTVAHIVLEAGIAKRLGQALRERHAGRRACVVTDAFLHRGGTLAPALASLGAAGWEVLVIDEVVADPPDEVVRD
AARRAREFGAELVIGLGGGSSMDVAKLVAVLGASAQPLEQMYGVNRVQGTRLPLVQIPTTAGTGSEVTPIAIVTTGKTTK
SGVVAPQLYADAAYLDPELTVGLPPAATAATGIDAMVHAIEAYTSKRLKNPLSDHLAGKALQLLSANLLPACRDGGDLAA
RSAMLLGAMLAGQAFANAPVAGVHALAYPIGGVFHVPHGLSNALVLPHVLRFNARVPAAAQAYAELGQLIGLQPAGSFDE
QAEAFIAHLVRLARDAGLPSNLQAVGIGVADLGGLAADAMKQERLLINNPCEIDEPSALEIYRQAFEHTYDELA

Sequences:

>Translated_394_residues
MQAFSFQTVAHIVLEAGIAKRLGQALRERHAGRRACVVTDAFLHRGGTLAPALASLGAAGWEVLVIDEVVADPPDEVVRD
AARRAREFGAELVIGLGGGSSMDVAKLVAVLGASAQPLEQMYGVNRVQGTRLPLVQIPTTAGTGSEVTPIAIVTTGKTTK
SGVVAPQLYADAAYLDPELTVGLPPAATAATGIDAMVHAIEAYTSKRLKNPLSDHLAGKALQLLSANLLPACRDGGDLAA
RSAMLLGAMLAGQAFANAPVAGVHALAYPIGGVFHVPHGLSNALVLPHVLRFNARVPAAAQAYAELGQLIGLQPAGSFDE
QAEAFIAHLVRLARDAGLPSNLQAVGIGVADLGGLAADAMKQERLLINNPCEIDEPSALEIYRQAFEHTYDELA
>Mature_394_residues
MQAFSFQTVAHIVLEAGIAKRLGQALRERHAGRRACVVTDAFLHRGGTLAPALASLGAAGWEVLVIDEVVADPPDEVVRD
AARRAREFGAELVIGLGGGSSMDVAKLVAVLGASAQPLEQMYGVNRVQGTRLPLVQIPTTAGTGSEVTPIAIVTTGKTTK
SGVVAPQLYADAAYLDPELTVGLPPAATAATGIDAMVHAIEAYTSKRLKNPLSDHLAGKALQLLSANLLPACRDGGDLAA
RSAMLLGAMLAGQAFANAPVAGVHALAYPIGGVFHVPHGLSNALVLPHVLRFNARVPAAAQAYAELGQLIGLQPAGSFDE
QAEAFIAHLVRLARDAGLPSNLQAVGIGVADLGGLAADAMKQERLLINNPCEIDEPSALEIYRQAFEHTYDELA

Specific function: Unknown

COG id: COG1454

COG function: function code C; Alcohol dehydrogenase, class IV

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the iron-containing alcohol dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI133922590, Length=412, Percent_Identity=28.8834951456311, Blast_Score=120, Evalue=2e-27,
Organism=Escherichia coli, GI48994951, Length=355, Percent_Identity=34.9295774647887, Blast_Score=187, Evalue=1e-48,
Organism=Escherichia coli, GI1789163, Length=363, Percent_Identity=32.2314049586777, Blast_Score=181, Evalue=7e-47,
Organism=Escherichia coli, GI1787493, Length=359, Percent_Identity=34.2618384401114, Blast_Score=172, Evalue=3e-44,
Organism=Escherichia coli, GI87082107, Length=336, Percent_Identity=37.202380952381, Blast_Score=171, Evalue=7e-44,
Organism=Escherichia coli, GI1789386, Length=359, Percent_Identity=24.5125348189415, Blast_Score=75, Evalue=6e-15,
Organism=Caenorhabditis elegans, GI17537053, Length=400, Percent_Identity=25, Blast_Score=102, Evalue=3e-22,
Organism=Saccharomyces cerevisiae, GI6321181, Length=367, Percent_Identity=34.3324250681199, Blast_Score=201, Evalue=2e-52,
Organism=Drosophila melanogaster, GI24657991, Length=426, Percent_Identity=30.5164319248826, Blast_Score=129, Evalue=4e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001670
- InterPro:   IPR018211 [H]

Pfam domain/function: PF00465 Fe-ADH [H]

EC number: =1.1.1.1 [H]

Molecular weight: Translated: 40885; Mature: 40885

Theoretical pI: Translated: 5.95; Mature: 5.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQAFSFQTVAHIVLEAGIAKRLGQALRERHAGRRACVVTDAFLHRGGTLAPALASLGAAG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHCCCCHHHHHHHCCCCC
WEVLVIDEVVADPPDEVVRDAARRAREFGAELVIGLGGGSSMDVAKLVAVLGASAQPLEQ
CEEEEEHHHHCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHCCCCCHHHH
MYGVNRVQGTRLPLVQIPTTAGTGSEVTPIAIVTTGKTTKSGVVAPQLYADAAYLDPELT
HHCCCCCCCCCCCEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCE
VGLPPAATAATGIDAMVHAIEAYTSKRLKNPLSDHLAGKALQLLSANLLPACRDGGDLAA
ECCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
RSAMLLGAMLAGQAFANAPVAGVHALAYPIGGVFHVPHGLSNALVLPHVLRFNARVPAAA
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHCCCCCHHH
QAYAELGQLIGLQPAGSFDEQAEAFIAHLVRLARDAGLPSNLQAVGIGVADLGGLAADAM
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEECCHHHHHHHHHHHH
KQERLLINNPCEIDEPSALEIYRQAFEHTYDELA
HHCCCEECCCCCCCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQAFSFQTVAHIVLEAGIAKRLGQALRERHAGRRACVVTDAFLHRGGTLAPALASLGAAG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHCCCCHHHHHHHCCCCC
WEVLVIDEVVADPPDEVVRDAARRAREFGAELVIGLGGGSSMDVAKLVAVLGASAQPLEQ
CEEEEEHHHHCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHCCCCCHHHH
MYGVNRVQGTRLPLVQIPTTAGTGSEVTPIAIVTTGKTTKSGVVAPQLYADAAYLDPELT
HHCCCCCCCCCCCEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCE
VGLPPAATAATGIDAMVHAIEAYTSKRLKNPLSDHLAGKALQLLSANLLPACRDGGDLAA
ECCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
RSAMLLGAMLAGQAFANAPVAGVHALAYPIGGVFHVPHGLSNALVLPHVLRFNARVPAAA
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHCCCCCHHH
QAYAELGQLIGLQPAGSFDEQAEAFIAHLVRLARDAGLPSNLQAVGIGVADLGGLAADAM
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEECCHHHHHHHHHHHH
KQERLLINNPCEIDEPSALEIYRQAFEHTYDELA
HHCCCEECCCCCCCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 3584063; 2308827; 2935393 [H]