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The map label for this gene is yciR [C]

Identifier: 238024841

GI number: 238024841

Start: 1883992

End: 1886073

Strand: Direct

Name: yciR [C]

Synonym: bglu_2g14810

Alternate gene names: 238024841

Gene position: 1883992-1886073 (Clockwise)

Preceding gene: 238024831

Following gene: 238024845

Centisome position: 66.63

GC content: 69.6

Gene sequence:

>2082_bases
ATGCACGGCTCGTACAATTTCCTCCTGGTGGCGGTGTCGTTCATGGTGGCGACGCTCGCGTCGTATACCGCGCTCGACCT
GACGGGCCGCATCGCGCTGCTCGGCCGTTCGCCGCTGCGCCACGCCTGGCTCGTCGGCGGCGCCGTCGCGATGGGCACCG
GCATCTGGTCGATGCACTTCATCGCGATGCTCGCGTTCACGCTGCCGATCCCGCTCGGCTACGATCTCGTCGAGACCGGC
TATTCGCTCGCGCTCGCGATCGTGGCGTCGTACCTCGCGCTGTTCGTCACCACGCGCCGGCGCGCCAGCTTCGTGCATCT
GGCGGCGAGCGGCACGCTGATGGGGCTCGGCGTGGCCGGCATGCACTACACCGGCATGGCGGCAATGCGCATGAGGCCCG
ACATCGACTACCAGCCGGGCTGGTTCGCGGCATCGGTCCTGATCGCGATCGTGGCCTCGATGGCGGCGCTCGCGATCGCC
CGGCGGCTGCGCAGCGTGAGGCGGCGCGCGGTCGTACGCGCACGCGCGGGCGCGGCGCTGGTGATGGCCGCGGGCATCAG
CGGCATGCACTATGCGGGCATGGCCGCGGCGACGTTCCTGCCGGGCAGCATCTGCGGCGCGGCGGCCGGCATCAATTCGG
CGTGGCTCGCCACCACCGTCTCGCTGTTCACGTTCGTGATCCTGATCGCCACGCTGCTGCTCTCGCGCATCGATGCACGC
AACAGCCGGCTCGCCAGCACGGTGACCAACCTGAACGGCGAGATCGTGCGGCTCGCCACGCTCGACACGCTGACCGGGCT
GCCCAACCGCAGCACGCTCACCCACCGCATCGCCGAGGCGATCGACACCGCACGGCGCCGCCACAGCGGTTTCGCGGTGC
TGTTCATGGATCTCGACGGCTTCAAGGCGATCAACGACTCGCTCGGCCATTCGATCGGCGACCGGGTGCTCGTGACGTTC
TCGCAGCGGCTGCGCGGCTGCGTGCGCTCGTTCGATACGGTGGCACGGCTCGGCGGCGACGAGTTCGTGGTGCTGGCCGA
GCGGATCGGCTCGGCGTCGGAGGCGCGCGTGATCGCCGAGACCGTGCTGGAGCGCACGCGCGACGGCGCCTGGAGCCTGG
ACGAGCCGCTGCAGGTCACCCCGAGCATCGGCATCGCGCTCTACCCGCGCGACGGCGAGACCGTCGACGCGTTGCTCAAG
CATGCCGACGCGGCGATGTACGAGGCCAAGCGCGGCGGGCGCGGCGCCTACCGCTTCTTCGAGGTGGGCATGAACGACGC
CGCGCTGCGCACGCTGCAGATCCAGAAGGCGGTGCACGAGGCGCTCGCCAGCGGCTATTTCTCGCTGCACTTCCAGCCGA
AATTCCGCAGCGATACGCGCGCGCTGACGGGCGCCGAGGCGCTGATCCGGCTGCGCCATCCGAAGCTCGGCACGCTCGCG
CCGCTCGACTTCATCCCGATCGCCGAGCGCTCGGGGCAGATCGTGGCGATCGGCTACTGGGTGGTGCGCGAGACCTGCCG
GCACATCCGCGAATGGAGGCAGGCCGGGCTGCCGCCGATGAAGGTGGCCGTCAATCTCTCCACGCGCCAGCTCGCGCAGC
CGGAGCTGGCCGCAGCGATGCTCCAGATCGTCCGGCAGGAGCAGGTCGCGCCGCAGCAGATCATCTTCGAGATCACCGAG
ACGATGGCGATGCAGGACGCCGAGCGCACCATCGTCGCGATCCGCGATTTCCAGCAGGGCGGCTTCGAGATCGCGATCGA
CGATTTCGGCACCGGCTATTCGAGCCTCGCCTACCTGCAGCGCTTTCGCGTCAAGCAGCTGAAGATCGACCGCTTCTTCA
CGAGCGGGCTCGACCGCCACGGCAAGGAAGGCGCGGCGATCGTCTCGGCGATCATCGCGCTCGCGCATTCGCTCGGCATG
GATGTGGTGGCCGAGGGCGTGGAGACCGTCACGCAGCGCGACAAGCTGGAGACGCTGCGCTGCGACGAGATGCAGGGCTT
CCTGCTCGGCCGGCCGCTCGCTGCCGACGCGTTCGCGCAGCTCGTGCGCGATCTTTCGGGCTCGAACGAGGCGCTGGCCT
GA

Upstream 100 bases:

>100_bases
TTTCCACCCGGTCTATTTCGCATCGCCCGCCGTGCTTCGTTGCGGATGAGGCGGCCGCGTGCCGCCAGCTTGCGCACATC
CCTGTTTTCGACGTCTCGAC

Downstream 100 bases:

>100_bases
GCCGGCGGCGCGCACCAGCCGCAGGCTCGGCAAGCCCCGCTCCTGCCGGCCGCGAACGCAGCCGCCGCTGGCGGTGACAA
GGGCGCGCCGCCGCGCGGCG

Product: diguanylate cyclase/phosphodiesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 693; Mature: 693

Protein sequence:

>693_residues
MHGSYNFLLVAVSFMVATLASYTALDLTGRIALLGRSPLRHAWLVGGAVAMGTGIWSMHFIAMLAFTLPIPLGYDLVETG
YSLALAIVASYLALFVTTRRRASFVHLAASGTLMGLGVAGMHYTGMAAMRMRPDIDYQPGWFAASVLIAIVASMAALAIA
RRLRSVRRRAVVRARAGAALVMAAGISGMHYAGMAAATFLPGSICGAAAGINSAWLATTVSLFTFVILIATLLLSRIDAR
NSRLASTVTNLNGEIVRLATLDTLTGLPNRSTLTHRIAEAIDTARRRHSGFAVLFMDLDGFKAINDSLGHSIGDRVLVTF
SQRLRGCVRSFDTVARLGGDEFVVLAERIGSASEARVIAETVLERTRDGAWSLDEPLQVTPSIGIALYPRDGETVDALLK
HADAAMYEAKRGGRGAYRFFEVGMNDAALRTLQIQKAVHEALASGYFSLHFQPKFRSDTRALTGAEALIRLRHPKLGTLA
PLDFIPIAERSGQIVAIGYWVVRETCRHIREWRQAGLPPMKVAVNLSTRQLAQPELAAAMLQIVRQEQVAPQQIIFEITE
TMAMQDAERTIVAIRDFQQGGFEIAIDDFGTGYSSLAYLQRFRVKQLKIDRFFTSGLDRHGKEGAAIVSAIIALAHSLGM
DVVAEGVETVTQRDKLETLRCDEMQGFLLGRPLAADAFAQLVRDLSGSNEALA

Sequences:

>Translated_693_residues
MHGSYNFLLVAVSFMVATLASYTALDLTGRIALLGRSPLRHAWLVGGAVAMGTGIWSMHFIAMLAFTLPIPLGYDLVETG
YSLALAIVASYLALFVTTRRRASFVHLAASGTLMGLGVAGMHYTGMAAMRMRPDIDYQPGWFAASVLIAIVASMAALAIA
RRLRSVRRRAVVRARAGAALVMAAGISGMHYAGMAAATFLPGSICGAAAGINSAWLATTVSLFTFVILIATLLLSRIDAR
NSRLASTVTNLNGEIVRLATLDTLTGLPNRSTLTHRIAEAIDTARRRHSGFAVLFMDLDGFKAINDSLGHSIGDRVLVTF
SQRLRGCVRSFDTVARLGGDEFVVLAERIGSASEARVIAETVLERTRDGAWSLDEPLQVTPSIGIALYPRDGETVDALLK
HADAAMYEAKRGGRGAYRFFEVGMNDAALRTLQIQKAVHEALASGYFSLHFQPKFRSDTRALTGAEALIRLRHPKLGTLA
PLDFIPIAERSGQIVAIGYWVVRETCRHIREWRQAGLPPMKVAVNLSTRQLAQPELAAAMLQIVRQEQVAPQQIIFEITE
TMAMQDAERTIVAIRDFQQGGFEIAIDDFGTGYSSLAYLQRFRVKQLKIDRFFTSGLDRHGKEGAAIVSAIIALAHSLGM
DVVAEGVETVTQRDKLETLRCDEMQGFLLGRPLAADAFAQLVRDLSGSNEALA
>Mature_693_residues
MHGSYNFLLVAVSFMVATLASYTALDLTGRIALLGRSPLRHAWLVGGAVAMGTGIWSMHFIAMLAFTLPIPLGYDLVETG
YSLALAIVASYLALFVTTRRRASFVHLAASGTLMGLGVAGMHYTGMAAMRMRPDIDYQPGWFAASVLIAIVASMAALAIA
RRLRSVRRRAVVRARAGAALVMAAGISGMHYAGMAAATFLPGSICGAAAGINSAWLATTVSLFTFVILIATLLLSRIDAR
NSRLASTVTNLNGEIVRLATLDTLTGLPNRSTLTHRIAEAIDTARRRHSGFAVLFMDLDGFKAINDSLGHSIGDRVLVTF
SQRLRGCVRSFDTVARLGGDEFVVLAERIGSASEARVIAETVLERTRDGAWSLDEPLQVTPSIGIALYPRDGETVDALLK
HADAAMYEAKRGGRGAYRFFEVGMNDAALRTLQIQKAVHEALASGYFSLHFQPKFRSDTRALTGAEALIRLRHPKLGTLA
PLDFIPIAERSGQIVAIGYWVVRETCRHIREWRQAGLPPMKVAVNLSTRQLAQPELAAAMLQIVRQEQVAPQQIIFEITE
TMAMQDAERTIVAIRDFQQGGFEIAIDDFGTGYSSLAYLQRFRVKQLKIDRFFTSGLDRHGKEGAAIVSAIIALAHSLGM
DVVAEGVETVTQRDKLETLRCDEMQGFLLGRPLAADAFAQLVRDLSGSNEALA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 MHYT domain [H]

Homologues:

Organism=Escherichia coli, GI1787541, Length=435, Percent_Identity=37.0114942528736, Blast_Score=277, Evalue=1e-75,
Organism=Escherichia coli, GI87081921, Length=424, Percent_Identity=31.8396226415094, Blast_Score=208, Evalue=9e-55,
Organism=Escherichia coli, GI226510982, Length=422, Percent_Identity=28.9099526066351, Blast_Score=184, Evalue=1e-47,
Organism=Escherichia coli, GI1790496, Length=256, Percent_Identity=35.546875, Blast_Score=140, Evalue=2e-34,
Organism=Escherichia coli, GI1788849, Length=435, Percent_Identity=28.9655172413793, Blast_Score=135, Evalue=9e-33,
Organism=Escherichia coli, GI87081743, Length=255, Percent_Identity=32.156862745098, Blast_Score=121, Evalue=1e-28,
Organism=Escherichia coli, GI1788502, Length=250, Percent_Identity=32.4, Blast_Score=119, Evalue=6e-28,
Organism=Escherichia coli, GI1787055, Length=269, Percent_Identity=32.3420074349442, Blast_Score=116, Evalue=5e-27,
Organism=Escherichia coli, GI1786507, Length=266, Percent_Identity=29.3233082706767, Blast_Score=116, Evalue=6e-27,
Organism=Escherichia coli, GI87081980, Length=262, Percent_Identity=32.0610687022901, Blast_Score=113, Evalue=5e-26,
Organism=Escherichia coli, GI87081845, Length=239, Percent_Identity=28.0334728033473, Blast_Score=112, Evalue=1e-25,
Organism=Escherichia coli, GI87082096, Length=423, Percent_Identity=25.0591016548463, Blast_Score=105, Evalue=1e-23,
Organism=Escherichia coli, GI1786584, Length=242, Percent_Identity=29.7520661157025, Blast_Score=96, Evalue=7e-21,
Organism=Escherichia coli, GI1788381, Length=164, Percent_Identity=35.3658536585366, Blast_Score=92, Evalue=1e-19,
Organism=Escherichia coli, GI87081977, Length=212, Percent_Identity=29.2452830188679, Blast_Score=87, Evalue=3e-18,
Organism=Escherichia coli, GI87081881, Length=169, Percent_Identity=35.5029585798817, Blast_Score=86, Evalue=7e-18,
Organism=Escherichia coli, GI1787262, Length=162, Percent_Identity=32.0987654320988, Blast_Score=86, Evalue=8e-18,
Organism=Escherichia coli, GI145693134, Length=160, Percent_Identity=39.375, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI1788085, Length=164, Percent_Identity=32.9268292682927, Blast_Score=80, Evalue=5e-16,
Organism=Escherichia coli, GI1787816, Length=167, Percent_Identity=31.7365269461078, Blast_Score=80, Evalue=6e-16,
Organism=Escherichia coli, GI1788956, Length=163, Percent_Identity=36.1963190184049, Blast_Score=79, Evalue=8e-16,
Organism=Escherichia coli, GI87082007, Length=198, Percent_Identity=29.7979797979798, Blast_Score=75, Evalue=2e-14,
Organism=Escherichia coli, GI1787802, Length=194, Percent_Identity=28.8659793814433, Blast_Score=73, Evalue=6e-14,
Organism=Escherichia coli, GI1787410, Length=151, Percent_Identity=29.8013245033113, Blast_Score=69, Evalue=9e-13,
Organism=Escherichia coli, GI87081974, Length=137, Percent_Identity=33.5766423357664, Blast_Score=67, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR000160
- InterPro:   IPR001633
- InterPro:   IPR005330 [H]

Pfam domain/function: PF00563 EAL; PF00990 GGDEF; PF03707 MHYT [H]

EC number: NA

Molecular weight: Translated: 75124; Mature: 75124

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: PS50924 MHYT ; PS50883 EAL ; PS50887 GGDEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHGSYNFLLVAVSFMVATLASYTALDLTGRIALLGRSPLRHAWLVGGAVAMGTGIWSMHF
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHCCHHHHHHHHHHHHH
IAMLAFTLPIPLGYDLVETGYSLALAIVASYLALFVTTRRRASFVHLAASGTLMGLGVAG
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCEEECCCCC
MHYTGMAAMRMRPDIDYQPGWFAASVLIAIVASMAALAIARRLRSVRRRAVVRARAGAAL
HHHHCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE
VMAAGISGMHYAGMAAATFLPGSICGAAAGINSAWLATTVSLFTFVILIATLLLSRIDAR
EEECCCCCCHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
NSRLASTVTNLNGEIVRLATLDTLTGLPNRSTLTHRIAEAIDTARRRHSGFAVLFMDLDG
CHHHHHHHHCCCCCEEEEEEHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCC
FKAINDSLGHSIGDRVLVTFSQRLRGCVRSFDTVARLGGDEFVVLAERIGSASEARVIAE
CHHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHCCCHHHHHHHH
TVLERTRDGAWSLDEPLQVTPSIGIALYPRDGETVDALLKHADAAMYEAKRGGRGAYRFF
HHHHHHCCCCCCCCCCCEECCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHE
EVGMNDAALRTLQIQKAVHEALASGYFSLHFQPKFRSDTRALTGAEALIRLRHPKLGTLA
EECCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCC
PLDFIPIAERSGQIVAIGYWVVRETCRHIREWRQAGLPPMKVAVNLSTRQLAQPELAAAM
CCCCEECCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHCCHHHHHHH
LQIVRQEQVAPQQIIFEITETMAMQDAERTIVAIRDFQQGGFEIAIDDFGTGYSSLAYLQ
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCEEEEEECCCCCHHHHHHHH
RFRVKQLKIDRFFTSGLDRHGKEGAAIVSAIIALAHSLGMDVVAEGVETVTQRDKLETLR
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
CDEMQGFLLGRPLAADAFAQLVRDLSGSNEALA
HHHHCCHHHCCCHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MHGSYNFLLVAVSFMVATLASYTALDLTGRIALLGRSPLRHAWLVGGAVAMGTGIWSMHF
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHCCHHHHHHHHHHHHH
IAMLAFTLPIPLGYDLVETGYSLALAIVASYLALFVTTRRRASFVHLAASGTLMGLGVAG
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCEEECCCCC
MHYTGMAAMRMRPDIDYQPGWFAASVLIAIVASMAALAIARRLRSVRRRAVVRARAGAAL
HHHHCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE
VMAAGISGMHYAGMAAATFLPGSICGAAAGINSAWLATTVSLFTFVILIATLLLSRIDAR
EEECCCCCCHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
NSRLASTVTNLNGEIVRLATLDTLTGLPNRSTLTHRIAEAIDTARRRHSGFAVLFMDLDG
CHHHHHHHHCCCCCEEEEEEHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCC
FKAINDSLGHSIGDRVLVTFSQRLRGCVRSFDTVARLGGDEFVVLAERIGSASEARVIAE
CHHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHCCCHHHHHHHH
TVLERTRDGAWSLDEPLQVTPSIGIALYPRDGETVDALLKHADAAMYEAKRGGRGAYRFF
HHHHHHCCCCCCCCCCCEECCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHE
EVGMNDAALRTLQIQKAVHEALASGYFSLHFQPKFRSDTRALTGAEALIRLRHPKLGTLA
EECCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCC
PLDFIPIAERSGQIVAIGYWVVRETCRHIREWRQAGLPPMKVAVNLSTRQLAQPELAAAM
CCCCEECCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHCCHHHHHHH
LQIVRQEQVAPQQIIFEITETMAMQDAERTIVAIRDFQQGGFEIAIDDFGTGYSSLAYLQ
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCEEEEEECCCCCHHHHHHHH
RFRVKQLKIDRFFTSGLDRHGKEGAAIVSAIIALAHSLGMDVVAEGVETVTQRDKLETLR
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
CDEMQGFLLGRPLAADAFAQLVRDLSGSNEALA
HHHHCCHHHCCCHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]