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The map label for this gene is yvrB [H]

Identifier: 238024837

GI number: 238024837

Start: 1878061

End: 1879125

Strand: Reverse

Name: yvrB [H]

Synonym: bglu_2g14770

Alternate gene names: 238024837

Gene position: 1879125-1878061 (Counterclockwise)

Preceding gene: 238024838

Following gene: 238024836

Centisome position: 66.46

GC content: 77.46

Gene sequence:

>1065_bases
ATGCGGCGCGCGCGACGTGCCGAAGGCGGCGGGTGGCAGCACCGGCCGGCCGCGCCGTGGGCGGCGCGGCCGTGGCGTGC
CGCGACGATCGGCCTGCTGCTGCTGGCCGGCTCGATGCTGGTCGCCACCGGCCTCGGCCCGGTGGCGATCGCGCCCGCCA
CCGTGGCGCGCGTGCTGGCCGCGCATCTGGGCGGCCACGCGGCGGCCGGCGTCGCACCCGGGCTCGATACGATCGTCTGG
CTGATCCGCCTGCCGCGCGTGCTGCTCGGCGCGCTGGTGGGCGCGGCGCTGGCGATGGTCGGCGTCGCGCTGCAGGCGGC
CACCGGCAACCGGATGGTCGATCCGCACCTGCTCGGCGTCAGCTCGGGCGCCTCGCTCGGCGCGGTGGCGGCCACCGTCT
GGTGCGGTGCCGCGTTCGGCTGGCTCACGCTGTCGGCGTTCGCGTTCGGCGGCGCGCTCGGCGCCACCGCGCTCGTGATC
GCGCTGGGGGCGCGCGCCGGGCGGCTCGATTCGTCGCGGCTGCTGCTCTCGGGCGTGGCCGTGTCGTTCGCGCTGATGGC
ACTCGCGAACCTGCTGATCTATCTCGGCGATCCGCGCGCCGCGCAGTCGGTGCTGTTCTGGATGCTGGGCGGCCTCGGGC
TCGCGCGCTGGAGCCTGCTCGGCGCGCCGGCGGCCTGCCTCGTCGCGGGCGGCCTGCTGCTGTTCGGCCGGCGCCGCGAG
CTGAACGCGCTGACGGGCGGCGACGTGGCCGCGGCGGCGCTCGGCGTGGACGTCTCGGCGCGGCGCCGCGAGCTGTTCGT
GGTCGGCTCGCTGCTGACGGCCGCCTGCGTCGCCGTGAGCGGCGCGATCGGCTTCGTCGGCCTGGTCGTGCCGCATGTGT
GCCGGCGCCTGTTCGGCGCCGAGCACGGCCGGCTGATGCCGTTCGCGGCGCTCGGCGGCGCGCTCGCGCTGGTCTGGGCC
GACGTGCTCGCGCGCACGCTGATCGCGCCCGACGATCTGCCGATCGGCGTGATCACCGCGCTGATCGGCGGCGCGCTGCT
GGTGTGGCTGGTGCGCCGCGGGTAG

Upstream 100 bases:

>100_bases
CGAGGCCACGCCCGGCGTGCGCAACGCCGAGGCGGTCGAGGCCCTCGCGCGCGCGCTGCATCCGGCCGCGTTCGCGGCGC
GGCCGGACCGGGCGCGCTAG

Downstream 100 bases:

>100_bases
GGGCAGGGCGGGGCGCGCGATCGCGGCGTTACGGCCGGGCGCCGCGCTTGGCTGGCCGCCATGGTGCCGGGCGATTTTGG
CCGGCCTGCGGCCCGGCGCC

Product: iron compound ABC transporter permease

Products: ADP; phosphate; iron dicitrate [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 354; Mature: 354

Protein sequence:

>354_residues
MRRARRAEGGGWQHRPAAPWAARPWRAATIGLLLLAGSMLVATGLGPVAIAPATVARVLAAHLGGHAAAGVAPGLDTIVW
LIRLPRVLLGALVGAALAMVGVALQAATGNRMVDPHLLGVSSGASLGAVAATVWCGAAFGWLTLSAFAFGGALGATALVI
ALGARAGRLDSSRLLLSGVAVSFALMALANLLIYLGDPRAAQSVLFWMLGGLGLARWSLLGAPAACLVAGGLLLFGRRRE
LNALTGGDVAAAALGVDVSARRRELFVVGSLLTAACVAVSGAIGFVGLVVPHVCRRLFGAEHGRLMPFAALGGALALVWA
DVLARTLIAPDDLPIGVITALIGGALLVWLVRRG

Sequences:

>Translated_354_residues
MRRARRAEGGGWQHRPAAPWAARPWRAATIGLLLLAGSMLVATGLGPVAIAPATVARVLAAHLGGHAAAGVAPGLDTIVW
LIRLPRVLLGALVGAALAMVGVALQAATGNRMVDPHLLGVSSGASLGAVAATVWCGAAFGWLTLSAFAFGGALGATALVI
ALGARAGRLDSSRLLLSGVAVSFALMALANLLIYLGDPRAAQSVLFWMLGGLGLARWSLLGAPAACLVAGGLLLFGRRRE
LNALTGGDVAAAALGVDVSARRRELFVVGSLLTAACVAVSGAIGFVGLVVPHVCRRLFGAEHGRLMPFAALGGALALVWA
DVLARTLIAPDDLPIGVITALIGGALLVWLVRRG
>Mature_354_residues
MRRARRAEGGGWQHRPAAPWAARPWRAATIGLLLLAGSMLVATGLGPVAIAPATVARVLAAHLGGHAAAGVAPGLDTIVW
LIRLPRVLLGALVGAALAMVGVALQAATGNRMVDPHLLGVSSGASLGAVAATVWCGAAFGWLTLSAFAFGGALGATALVI
ALGARAGRLDSSRLLLSGVAVSFALMALANLLIYLGDPRAAQSVLFWMLGGLGLARWSLLGAPAACLVAGGLLLFGRRRE
LNALTGGDVAAAALGVDVSARRRELFVVGSLLTAACVAVSGAIGFVGLVVPHVCRRLFGAEHGRLMPFAALGGALALVWA
DVLARTLIAPDDLPIGVITALIGGALLVWLVRRG

Specific function: Probably part of an ABC transporter complex. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0609

COG function: function code P; ABC-type Fe3+-siderophore transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790741, Length=286, Percent_Identity=35.6643356643357, Blast_Score=133, Evalue=2e-32,
Organism=Escherichia coli, GI1790740, Length=271, Percent_Identity=38.0073800738007, Blast_Score=127, Evalue=1e-30,
Organism=Escherichia coli, GI1788004, Length=282, Percent_Identity=37.5886524822695, Blast_Score=124, Evalue=6e-30,
Organism=Escherichia coli, GI1786805, Length=303, Percent_Identity=34.983498349835, Blast_Score=106, Evalue=2e-24,
Organism=Escherichia coli, GI1786347, Length=289, Percent_Identity=34.9480968858132, Blast_Score=103, Evalue=2e-23,
Organism=Escherichia coli, GI1786804, Length=271, Percent_Identity=35.0553505535055, Blast_Score=84, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000522 [H]

Pfam domain/function: PF01032 FecCD [H]

EC number: NA

Molecular weight: Translated: 35757; Mature: 35757

Theoretical pI: Translated: 12.18; Mature: 12.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRARRAEGGGWQHRPAAPWAARPWRAATIGLLLLAGSMLVATGLGPVAIAPATVARVLA
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHCCHHHHHHHHH
AHLGGHAAAGVAPGLDTIVWLIRLPRVLLGALVGAALAMVGVALQAATGNRMVDPHLLGV
HHHCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEC
SSGASLGAVAATVWCGAAFGWLTLSAFAFGGALGATALVIALGARAGRLDSSRLLLSGVA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
VSFALMALANLLIYLGDPRAAQSVLFWMLGGLGLARWSLLGAPAACLVAGGLLLFGRRRE
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCC
LNALTGGDVAAAALGVDVSARRRELFVVGSLLTAACVAVSGAIGFVGLVVPHVCRRLFGA
CCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
EHGRLMPFAALGGALALVWADVLARTLIAPDDLPIGVITALIGGALLVWLVRRG
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRRARRAEGGGWQHRPAAPWAARPWRAATIGLLLLAGSMLVATGLGPVAIAPATVARVLA
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHCCHHHHHHHHH
AHLGGHAAAGVAPGLDTIVWLIRLPRVLLGALVGAALAMVGVALQAATGNRMVDPHLLGV
HHHCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEC
SSGASLGAVAATVWCGAAFGWLTLSAFAFGGALGATALVIALGARAGRLDSSRLLLSGVA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
VSFALMALANLLIYLGDPRAAQSVLFWMLGGLGLARWSLLGAPAACLVAGGLLLFGRRRE
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCC
LNALTGGDVAAAALGVDVSARRRELFVVGSLLTAACVAVSGAIGFVGLVVPHVCRRLFGA
CCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
EHGRLMPFAALGGALALVWADVLARTLIAPDDLPIGVITALIGGALLVWLVRRG
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; iron dicitrate [Periplasm]; H2O [C]

Specific reaction: ATP + iron dicitrate [Periplasm] + H2O = ADP + phosphate + iron dicitrate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9639930; 9384377 [H]