| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is solI [H]
Identifier: 238024811
GI number: 238024811
Start: 1848865
End: 1849476
Strand: Direct
Name: solI [H]
Synonym: bglu_2g14490
Alternate gene names: 238024811
Gene position: 1848865-1849476 (Clockwise)
Preceding gene: 238024810
Following gene: 238024813
Centisome position: 65.39
GC content: 68.95
Gene sequence:
>612_bases ATGCAAACTTTCGTTCACGAGGCAGGCCGCCTTCCCGCCCATATCGCCGCCGAGCTGGGTTCGTACCGTTATCGCGTGTT CGTCGAGCAGCTCGGCTGGCAGCTGCCGTCCGAAGACGAAAAATTCGAGCGCGATCAGTACGATCGCGACGATACCGTCT ACGTATTGGGACGCGATGCGAATGGGGAGATATGCGGTTGCGCGCGGCTGCTGCCGACCACCCGCCCCTACCTGTTGCAG GAAGTGTTCCCGCACCTGCTGGCCGACGAGCATCCGGCGCCGCGCTCCGCCCACGTCTGGGAGCTGTCGCGCTTCGCGGC GACCCCCGAGGAAGGGGCCGATGCCGGCAGCCTGGCCTGGTCGGTGCGGCCGATGCTCGCCGCCGCCGTGGAGTGCGCGG CACGGCGCGGCGCGCGCCAGTTGATCGGGGTCACGTTCTGCAGCATCGAGCGGCTGTTCCGCCGGATCGGCGTGCATGCC CACCGGGCCGGCGCACCGGTGTCGATCGACGGGCGCATGGTGGTGGCATGCTGGATCGACATCGACGCGCAGACGCTGGC CGCGCTCGACCTCGACCCGGCGCTTTGCGCGTCGCAACCCGAAGCGGCCTGA
Upstream 100 bases:
>100_bases CAGGAATCGGCACCGAATCCCTGTCAGGAATAACAGTTACCTGTCCTCGGGGCGCACGCTGTAATGCGCCCATTCCAAAC GGAATTACCACGAGGACACC
Downstream 100 bases:
>100_bases AGCTGCCCGAGCCGCACGGCGTTGCCGCCCGCCGCGCGCGTGGGGCCAGTCAGCGCAGCGCCGGCAGCATCAGCTCGAGA TTCTGCACGGCCGCGCCGGC
Product: quorum sensing autoinducer synthase
Products: NA
Alternate protein names: Autoinducer synthesis protein solI [H]
Number of amino acids: Translated: 203; Mature: 203
Protein sequence:
>203_residues MQTFVHEAGRLPAHIAAELGSYRYRVFVEQLGWQLPSEDEKFERDQYDRDDTVYVLGRDANGEICGCARLLPTTRPYLLQ EVFPHLLADEHPAPRSAHVWELSRFAATPEEGADAGSLAWSVRPMLAAAVECAARRGARQLIGVTFCSIERLFRRIGVHA HRAGAPVSIDGRMVVACWIDIDAQTLAALDLDPALCASQPEAA
Sequences:
>Translated_203_residues MQTFVHEAGRLPAHIAAELGSYRYRVFVEQLGWQLPSEDEKFERDQYDRDDTVYVLGRDANGEICGCARLLPTTRPYLLQ EVFPHLLADEHPAPRSAHVWELSRFAATPEEGADAGSLAWSVRPMLAAAVECAARRGARQLIGVTFCSIERLFRRIGVHA HRAGAPVSIDGRMVVACWIDIDAQTLAALDLDPALCASQPEAA >Mature_203_residues MQTFVHEAGRLPAHIAAELGSYRYRVFVEQLGWQLPSEDEKFERDQYDRDDTVYVLGRDANGEICGCARLLPTTRPYLLQ EVFPHLLADEHPAPRSAHVWELSRFAATPEEGADAGSLAWSVRPMLAAAVECAARRGARQLIGVTFCSIERLFRRIGVHA HRAGAPVSIDGRMVVACWIDIDAQTLAALDLDPALCASQPEAA
Specific function: Required for the synthesis of acyl-HSL autoinducers that bind to solR [H]
COG id: COG3916
COG function: function code TQ; N-acyl-L-homoserine lactone synthetase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the autoinducer synthase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016181 - InterPro: IPR001690 - InterPro: IPR018311 [H]
Pfam domain/function: PF00765 Autoind_synth [H]
EC number: =2.3.1.184 [H]
Molecular weight: Translated: 22408; Mature: 22408
Theoretical pI: Translated: 5.30; Mature: 5.30
Prosite motif: PS00949 AUTOINDUCERS_SYNTH
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTFVHEAGRLPAHIAAELGSYRYRVFVEQLGWQLPSEDEKFERDQYDRDDTVYVLGRDA CCCHHHHHCCCHHHHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCEEEEEEECC NGEICGCARLLPTTRPYLLQEVFPHLLADEHPAPRSAHVWELSRFAATPEEGADAGSLAW CCCEEHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHH SVRPMLAAAVECAARRGARQLIGVTFCSIERLFRRIGVHAHRAGAPVSIDGRMVVACWID HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCEEEEEEEE IDAQTLAALDLDPALCASQPEAA CCHHHHHHCCCCHHHHCCCCCCC >Mature Secondary Structure MQTFVHEAGRLPAHIAAELGSYRYRVFVEQLGWQLPSEDEKFERDQYDRDDTVYVLGRDA CCCHHHHHCCCHHHHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCEEEEEEECC NGEICGCARLLPTTRPYLLQEVFPHLLADEHPAPRSAHVWELSRFAATPEEGADAGSLAW CCCEEHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHH SVRPMLAAAVECAARRGARQLIGVTFCSIERLFRRIGVHAHRAGAPVSIDGRMVVACWID HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCEEEEEEEE IDAQTLAALDLDPALCASQPEAA CCHHHHHHCCCCHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11823852 [H]