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The map label for this gene is solR [H]

Identifier: 238024809

GI number: 238024809

Start: 1847346

End: 1848065

Strand: Reverse

Name: solR [H]

Synonym: bglu_2g14470

Alternate gene names: 238024809

Gene position: 1848065-1847346 (Counterclockwise)

Preceding gene: 238024812

Following gene: 238024805

Centisome position: 65.36

GC content: 65.56

Gene sequence:

>720_bases
ATGGAACTACGCTGGCAGGATGCCTACCACCAGTTCAATACGGCGGAAAACGAGCAGCAGCTCTTTCACCAGGTTTCCGC
ATACTCGAAGCGTCTCGGCTTCGAGTACTGCTGCTATGGAATCCGCGTGCCGCAGCCGGGATCGCAGCCCTTGGTCGAGA
TCTTCGACACCTATCCGCCGGGCTGGATGGCGCACTATCAGGCGCGCAACTACATCGAGATCGATCCGACCGTGCGCGAC
GGGGCGGCGAGCCCGAACATGATCATCTGGCCCGACGCCGATGCGGCGGAGCAACCGTCGCTCTGGCGCGACGCGCGCGA
CTTCGGCATGTCGGTCGGCGTCGCGCAGTCGAGCTGGGCCGCGCGCGGCGTGTTCGGACTGTTGACCATCGCGCGGCGCT
CGGACCGCCTCACGCCGGCCGAGATCAACAGCCTGACGCTGCAGGCCAACTGGCTCGCCAATCTCTCGCATTCGCTGATG
GGCCGGTTCCTCGTGCCGAAGCTGTCGCCGGCCGCGAGCATCTCGCTCACCAAGCGCGAACGCGAGGTGCTGAGCTGGAC
CAGCGAAGGCCGCACCGCCAGCGAGATCGGCGAACAGCTCAACATCTCCGAGCGCACCGTCACGTTCCACATCAACAACA
TCCTCGCCAAGCTCGGCGCGGCCAACAAGGTGCAGGCGGTCGTCAAGGCGATCGGCATGGGGCTGATCCAGGCGCCGTAG

Upstream 100 bases:

>100_bases
AGGGATGAAGCAGGGGCGGAGTCATGCGCGGGAATGTATCAAGCCCGTGTGCTTGATGTAACCTAGCAAGAATGACAGCG
TGGAAGCTGTTGGAGAGATG

Downstream 100 bases:

>100_bases
GCGGCCCGGTACGGTCGGGTTCGACCAAGCGGCGGCGACGCGCCGGCGCGGGCTTCACGGCCCGGCCGGCGCGTTTCTCA
TGGGCGCGTCATTCCATCAG

Product: quorum sensing LuxR family sensor regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 239; Mature: 239

Protein sequence:

>239_residues
MELRWQDAYHQFNTAENEQQLFHQVSAYSKRLGFEYCCYGIRVPQPGSQPLVEIFDTYPPGWMAHYQARNYIEIDPTVRD
GAASPNMIIWPDADAAEQPSLWRDARDFGMSVGVAQSSWAARGVFGLLTIARRSDRLTPAEINSLTLQANWLANLSHSLM
GRFLVPKLSPAASISLTKREREVLSWTSEGRTASEIGEQLNISERTVTFHINNILAKLGAANKVQAVVKAIGMGLIQAP

Sequences:

>Translated_239_residues
MELRWQDAYHQFNTAENEQQLFHQVSAYSKRLGFEYCCYGIRVPQPGSQPLVEIFDTYPPGWMAHYQARNYIEIDPTVRD
GAASPNMIIWPDADAAEQPSLWRDARDFGMSVGVAQSSWAARGVFGLLTIARRSDRLTPAEINSLTLQANWLANLSHSLM
GRFLVPKLSPAASISLTKREREVLSWTSEGRTASEIGEQLNISERTVTFHINNILAKLGAANKVQAVVKAIGMGLIQAP
>Mature_239_residues
MELRWQDAYHQFNTAENEQQLFHQVSAYSKRLGFEYCCYGIRVPQPGSQPLVEIFDTYPPGWMAHYQARNYIEIDPTVRD
GAASPNMIIWPDADAAEQPSLWRDARDFGMSVGVAQSSWAARGVFGLLTIARRSDRLTPAEINSLTLQANWLANLSHSLM
GRFLVPKLSPAASISLTKREREVLSWTSEGRTASEIGEQLNISERTVTFHINNILAKLGAANKVQAVVKAIGMGLIQAP

Specific function: Activates Cell Division By Specifically Increasing Transcription From One Of The Two Promoters That Lie Immediately Upstream Of The Ftsqaz Gene Cluster. [C]

COG id: COG2771

COG function: function code K; DNA-binding HTH domain-containing proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH luxR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788224, Length=226, Percent_Identity=32.7433628318584, Blast_Score=140, Evalue=1e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016032
- InterPro:   IPR005143
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF03472 Autoind_bind; PF00196 GerE [H]

EC number: NA

Molecular weight: Translated: 26648; Mature: 26648

Theoretical pI: Translated: 7.06; Mature: 7.06

Prosite motif: PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELRWQDAYHQFNTAENEQQLFHQVSAYSKRLGFEYCCYGIRVPQPGSQPLVEIFDTYPP
CCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHEEECCCCCCCCCHHHHHHHCCCC
GWMAHYQARNYIEIDPTVRDGAASPNMIIWPDADAAEQPSLWRDARDFGMSVGVAQSSWA
CHHHHHCCCCEEEECCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCHH
ARGVFGLLTIARRSDRLTPAEINSLTLQANWLANLSHSLMGRFLVPKLSPAASISLTKRE
HHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHH
REVLSWTSEGRTASEIGEQLNISERTVTFHINNILAKLGAANKVQAVVKAIGMGLIQAP
HHHHHHCCCCCCHHHHHHHCCCCCEEEEEEHHHHHHHHCCCHHHHHHHHHHCCHHCCCC
>Mature Secondary Structure
MELRWQDAYHQFNTAENEQQLFHQVSAYSKRLGFEYCCYGIRVPQPGSQPLVEIFDTYPP
CCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHEEECCCCCCCCCHHHHHHHCCCC
GWMAHYQARNYIEIDPTVRDGAASPNMIIWPDADAAEQPSLWRDARDFGMSVGVAQSSWA
CHHHHHCCCCEEEECCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCHH
ARGVFGLLTIARRSDRLTPAEINSLTLQANWLANLSHSLMGRFLVPKLSPAASISLTKRE
HHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHH
REVLSWTSEGRTASEIGEQLNISERTVTFHINNILAKLGAANKVQAVVKAIGMGLIQAP
HHHHHHCCCCCCHHHHHHHCCCCCEEEEEEHHHHHHHHCCCHHHHHHHHHHCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11823852 [H]