Definition Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence.
Accession NC_012721
Length 2,827,333

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The map label for this gene is 238024805

Identifier: 238024805

GI number: 238024805

Start: 1843238

End: 1843834

Strand: Reverse

Name: 238024805

Synonym: bglu_2g14430

Alternate gene names: NA

Gene position: 1843834-1843238 (Counterclockwise)

Preceding gene: 238024809

Following gene: 238024804

Centisome position: 65.21

GC content: 73.2

Gene sequence:

>597_bases
ATGGACGATTTGTTCGATTCCCGGCCCGAGCCCGATCTCGACTGGTATCCCGACTGGCTGCCGCCCGCCGACGCCGATGC
GCTGCTCGCGCGCCTGATCGCGGAAGTCGCCTGGCGGCAGGACGCGATCCGCACGCCGCGCGGCATGATCCCGCTGCCGC
GCCTGACGGCCTGGCAGGGCGAGCCCGATGCCGTCTACGTCTATTCGGGCATCCGCAACGAACCGGCGCCGTGGTCCCCC
GCCGTGGCCGAGTTGCGCGCGCGCGCCCAGGCCGCCTGCCGCGCGCGCTTCAACAGCGTGCTGCTGAACCGCTATCGCAC
GGGCACCGACGGCATGGGCTGGCACGCCGACGACGAGCCCGAACTCGGCGCGGCGCCCGTGATCGCCTCGGTCAGCCTCG
GCGCGACGCGCGTGTTCCATCTGCGGCACGAGGCAACGCGCGTCGTGCGGGCCTACCGGCTCACGCACGGCAGCCTGCTC
GTGATGCGCGGCGCGACGCAGCGCGACTGGGTCCACCGCCTGGCCAAGGCGCCGGCCGTGCAGGGCGAGCGCGTCAACCT
GACGTTCCGCCTCGTGATGCCGCGCCGCAAGCCATGA

Upstream 100 bases:

>100_bases
TTGCGGGAAAACAGGATCGGGTGCGCTGCGCCGGCGCGGCGGCCTTGCGGCTAGGGCACCATCCCGCGATGATAGCCGGA
TGTGACGATTTCTTCCGATC

Downstream 100 bases:

>100_bases
CCGGCCCCCGCACCGTCGCCGCGCGCCGCGGCGCCGCCCGCCTGCCCGGGCCGGGCCATCTGACAGTTTCGACGAATCTG
GCGCCGCCGTCGCCGAATCG

Product: DNA-N1-methyladenine dioxygenase

Products: NA

Alternate protein names: Alkylated DNA Repair Protein; DNA Repair System Specific For Alkylated DNA; DNA-N1-Methyladenine Dioxygenase; 2OG-Fe(II) Oxygenase Superfamily Protein; Oxidoreductase 2OG-Fe(II) Oxygenase Family; 2OG-Fe(II) Oxygenase Family Oxidoreductase; Alkylated DNA Repair Protein-Like Protein; Oxidoreductase 2OG-Fe(II) Oxygenase Family Protein; Alkylated DNA Repair Protein AlkB; CRISPR-Associated Family Protein; DNA Repair System Specific For Alkylated DNA Protein; 2OG-Fe(II) Oxygenase Family Protein; DNA Repair System Protein

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MDDLFDSRPEPDLDWYPDWLPPADADALLARLIAEVAWRQDAIRTPRGMIPLPRLTAWQGEPDAVYVYSGIRNEPAPWSP
AVAELRARAQAACRARFNSVLLNRYRTGTDGMGWHADDEPELGAAPVIASVSLGATRVFHLRHEATRVVRAYRLTHGSLL
VMRGATQRDWVHRLAKAPAVQGERVNLTFRLVMPRRKP

Sequences:

>Translated_198_residues
MDDLFDSRPEPDLDWYPDWLPPADADALLARLIAEVAWRQDAIRTPRGMIPLPRLTAWQGEPDAVYVYSGIRNEPAPWSP
AVAELRARAQAACRARFNSVLLNRYRTGTDGMGWHADDEPELGAAPVIASVSLGATRVFHLRHEATRVVRAYRLTHGSLL
VMRGATQRDWVHRLAKAPAVQGERVNLTFRLVMPRRKP
>Mature_198_residues
MDDLFDSRPEPDLDWYPDWLPPADADALLARLIAEVAWRQDAIRTPRGMIPLPRLTAWQGEPDAVYVYSGIRNEPAPWSP
AVAELRARAQAACRARFNSVLLNRYRTGTDGMGWHADDEPELGAAPVIASVSLGATRVFHLRHEATRVVRAYRLTHGSLL
VMRGATQRDWVHRLAKAPAVQGERVNLTFRLVMPRRKP

Specific function: Unknown

COG id: COG3145

COG function: function code L; Alkylated DNA repair protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI21040275, Length=189, Percent_Identity=43.3862433862434, Blast_Score=138, Evalue=4e-33,
Organism=Homo sapiens, GI224451107, Length=193, Percent_Identity=35.7512953367876, Blast_Score=108, Evalue=2e-24,
Organism=Homo sapiens, GI48717226, Length=193, Percent_Identity=35.7512953367876, Blast_Score=108, Evalue=2e-24,
Organism=Homo sapiens, GI224451103, Length=193, Percent_Identity=35.7512953367876, Blast_Score=108, Evalue=2e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22307; Mature: 22307

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDDLFDSRPEPDLDWYPDWLPPADADALLARLIAEVAWRQDAIRTPRGMIPLPRLTAWQG
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
EPDAVYVYSGIRNEPAPWSPAVAELRARAQAACRARFNSVLLNRYRTGTDGMGWHADDEP
CCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
ELGAAPVIASVSLGATRVFHLRHEATRVVRAYRLTHGSLLVMRGATQRDWVHRLAKAPAV
CCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCCC
QGERVNLTFRLVMPRRKP
CCCEEEEEEEEECCCCCC
>Mature Secondary Structure
MDDLFDSRPEPDLDWYPDWLPPADADALLARLIAEVAWRQDAIRTPRGMIPLPRLTAWQG
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
EPDAVYVYSGIRNEPAPWSPAVAELRARAQAACRARFNSVLLNRYRTGTDGMGWHADDEP
CCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
ELGAAPVIASVSLGATRVFHLRHEATRVVRAYRLTHGSLLVMRGATQRDWVHRLAKAPAV
CCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCCC
QGERVNLTFRLVMPRRKP
CCCEEEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA