| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is ssuA [H]
Identifier: 238024785
GI number: 238024785
Start: 1819676
End: 1820770
Strand: Direct
Name: ssuA [H]
Synonym: bglu_2g14230
Alternate gene names: 238024785
Gene position: 1819676-1820770 (Clockwise)
Preceding gene: 238024784
Following gene: 238024787
Centisome position: 64.36
GC content: 73.79
Gene sequence:
>1095_bases ATGTTTCGCCTTGCCCGCTTCATCCCCGCCCTGCGCCTCATCCCCGCCCTGCGCTTGGGCGCGCTCGCGCGCCGCCTGCC TTGCCGGCGTCGCGCCGGCGCCGCGCGCACGGCCCGCCGCCATGCGCCCGGGCTTGCCGTCCGGCTTGGCGCGCTTCTCG TCGCCGCGCTGTCGGCCGGCAGCGCGGCCGCGCAGGCGGGCAGCGGCCACGTGCTGCGGATCGGCTACCAGAAGGCCGGC CTGCTCGCGGTGGTGAAGGCGCAAGGCACGCTCGAGGCGCGGCTCGCGGCGCTCGGCTACACGGTGAAATGGTTCGAATT CCCGGCCGGCCCGCAGCTGCTCGAGGCGCTGAACGCCGACAGCATCGACTTCGGCTACACCGGCGCGCCGCCGCCCGTGT TCGCGCAGGCGGGCGGCGTGCGCTTCGTCTACGTGGGCGCCGAGCCGCCCGCGCCGCACGCCGAGGCGATCTTCGTGAAG CCGGGCTCGCCGGTTCGCGACCTGGCCGACCTGCGCGGCAGGAAGGTGGCGCTGCAGAAGGGCTCCAGCTCGAACTACCT GCTGCTGGCCGCGCTGAACCGGGCCGGGCTACGCTACGGCGACATCCGGCCCGTCTACCTGGCCCCCGCCGACGCGCGCG CCGCGTTCGAGAACGGCGACGTGGACGCCTGGGTGGTGTGGGACCCGTATTACGCGGCCGCGCAGAGCGCGCTCAAGGTG CGCACGCTGTCCGACTACACCGGGCTCACGGCGCCTTACAACTTCTATGAGGCAACGCGCGAGTTCGCCGGCGCGCATGC CGACATCGTCGCCGCCGTGCTGCGCCAGCTCCGCGAGACGGGCCGCTGGGTCAACGCGCACCCGGCCGACACGGCCGCGA TCATCGCGCCGAAGGTGGGCCTCGACACGGCCCTGGTCGAAGCGTGGTTCAAACGCGTGCCGTTCGGCGCGGTGCCGGTG GACGACCGCATCGTCGCCTCGCAGCAGGCGGTGGCCGATGCGTTCTACGGCGTGAAGCTGATTCCGGCCAGGATCGACGT GGCCGCCGCGGTCTGGCGCGATCCGGCCGTGCAGGCCGCGCTCGCGTCGAAGTGA
Upstream 100 bases:
>100_bases GCCCATGCGACGATTTTTCGACTGCGGCGGCATGGTTCGGCATGCCGCCGTCCCCGTCGAATCTCGCCGCATGCCGGCGA CCGCTCCGGAGACCCGCCCG
Downstream 100 bases:
>100_bases GGCCCGCCGCCGGTGGCGGCGCGCGTCAATGCGACAGCCCGGCCTCGCCGGCCGCAGCGGCCTTGTCGTGGGTCGCGTAC CGGTCGATCATGGTCGCGCT
Product: putative aliphatic sulfonates-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 364; Mature: 364
Protein sequence:
>364_residues MFRLARFIPALRLIPALRLGALARRLPCRRRAGAARTARRHAPGLAVRLGALLVAALSAGSAAAQAGSGHVLRIGYQKAG LLAVVKAQGTLEARLAALGYTVKWFEFPAGPQLLEALNADSIDFGYTGAPPPVFAQAGGVRFVYVGAEPPAPHAEAIFVK PGSPVRDLADLRGRKVALQKGSSSNYLLLAALNRAGLRYGDIRPVYLAPADARAAFENGDVDAWVVWDPYYAAAQSALKV RTLSDYTGLTAPYNFYEATREFAGAHADIVAAVLRQLRETGRWVNAHPADTAAIIAPKVGLDTALVEAWFKRVPFGAVPV DDRIVASQQAVADAFYGVKLIPARIDVAAAVWRDPAVQAALASK
Sequences:
>Translated_364_residues MFRLARFIPALRLIPALRLGALARRLPCRRRAGAARTARRHAPGLAVRLGALLVAALSAGSAAAQAGSGHVLRIGYQKAG LLAVVKAQGTLEARLAALGYTVKWFEFPAGPQLLEALNADSIDFGYTGAPPPVFAQAGGVRFVYVGAEPPAPHAEAIFVK PGSPVRDLADLRGRKVALQKGSSSNYLLLAALNRAGLRYGDIRPVYLAPADARAAFENGDVDAWVVWDPYYAAAQSALKV RTLSDYTGLTAPYNFYEATREFAGAHADIVAAVLRQLRETGRWVNAHPADTAAIIAPKVGLDTALVEAWFKRVPFGAVPV DDRIVASQQAVADAFYGVKLIPARIDVAAAVWRDPAVQAALASK >Mature_364_residues MFRLARFIPALRLIPALRLGALARRLPCRRRAGAARTARRHAPGLAVRLGALLVAALSAGSAAAQAGSGHVLRIGYQKAG LLAVVKAQGTLEARLAALGYTVKWFEFPAGPQLLEALNADSIDFGYTGAPPPVFAQAGGVRFVYVGAEPPAPHAEAIFVK PGSPVRDLADLRGRKVALQKGSSSNYLLLAALNRAGLRYGDIRPVYLAPADARAAFENGDVDAWVVWDPYYAAAQSALKV RTLSDYTGLTAPYNFYEATREFAGAHADIVAAVLRQLRETGRWVNAHPADTAAIIAPKVGLDTALVEAWFKRVPFGAVPV DDRIVASQQAVADAFYGVKLIPARIDVAAAVWRDPAVQAALASK
Specific function: Part of a binding-protein-dependent transport system for aliphatic sulfonates. Putative binding protein [H]
COG id: COG0715
COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein ssuA/tauA family [H]
Homologues:
Organism=Escherichia coli, GI87081803, Length=294, Percent_Identity=45.2380952380952, Blast_Score=251, Evalue=3e-68, Organism=Escherichia coli, GI87081727, Length=176, Percent_Identity=30.6818181818182, Blast_Score=70, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010067 - InterPro: IPR015168 - InterPro: IPR001638 [H]
Pfam domain/function: PF09084 NMT1 [H]
EC number: NA
Molecular weight: Translated: 38661; Mature: 38661
Theoretical pI: Translated: 10.48; Mature: 10.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 0.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFRLARFIPALRLIPALRLGALARRLPCRRRAGAARTARRHAPGLAVRLGALLVAALSAG CCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHCCC SAAAQAGSGHVLRIGYQKAGLLAVVKAQGTLEARLAALGYTVKWFEFPAGPQLLEALNAD CHHHCCCCCCEEEEECCCCCEEEEEECCCCHHHHHHHHCCEEEEEECCCCHHHHHHCCCC SIDFGYTGAPPPVFAQAGGVRFVYVGAEPPAPHAEAIFVKPGSPVRDLADLRGRKVALQK CCCCCCCCCCCCCEECCCCEEEEEECCCCCCCCCCEEEECCCCCHHHHHHCCCCEEEEEC GSSSNYLLLAALNRAGLRYGDIRPVYLAPADARAAFENGDVDAWVVWDPYYAAAQSALKV CCCCCEEEEEEECCCCCEECCCCEEEECCCCHHHHHCCCCCCEEEEECCHHHHHHHHHEE RTLSDYTGLTAPYNFYEATREFAGAHADIVAAVLRQLRETGRWVNAHPADTAAIIAPKVG EEECCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCEECCCCCCCEEEEECCCC LDTALVEAWFKRVPFGAVPVDDRIVASQQAVADAFYGVKLIPARIDVAAAVWRDPAVQAA CHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHCCHHHHHH LASK HCCC >Mature Secondary Structure MFRLARFIPALRLIPALRLGALARRLPCRRRAGAARTARRHAPGLAVRLGALLVAALSAG CCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHCCC SAAAQAGSGHVLRIGYQKAGLLAVVKAQGTLEARLAALGYTVKWFEFPAGPQLLEALNAD CHHHCCCCCCEEEEECCCCCEEEEEECCCCHHHHHHHHCCEEEEEECCCCHHHHHHCCCC SIDFGYTGAPPPVFAQAGGVRFVYVGAEPPAPHAEAIFVKPGSPVRDLADLRGRKVALQK CCCCCCCCCCCCCEECCCCEEEEEECCCCCCCCCCEEEECCCCCHHHHHHCCCCEEEEEC GSSSNYLLLAALNRAGLRYGDIRPVYLAPADARAAFENGDVDAWVVWDPYYAAAQSALKV CCCCCEEEEEEECCCCCEECCCCEEEECCCCHHHHHCCCCCCEEEEECCHHHHHHHHHEE RTLSDYTGLTAPYNFYEATREFAGAHADIVAAVLRQLRETGRWVNAHPADTAAIIAPKVG EEECCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCEECCCCCCCEEEEECCCC LDTALVEAWFKRVPFGAVPVDDRIVASQQAVADAFYGVKLIPARIDVAAAVWRDPAVQAA CHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHCCHHHHHH LASK HCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10506196; 8905232; 9278503 [H]