| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238024784
Identifier: 238024784
GI number: 238024784
Start: 1818661
End: 1819524
Strand: Direct
Name: 238024784
Synonym: bglu_2g14220
Alternate gene names: NA
Gene position: 1818661-1819524 (Clockwise)
Preceding gene: 238024782
Following gene: 238024785
Centisome position: 64.32
GC content: 72.34
Gene sequence:
>864_bases ATGCCGACACCGACTCCGCCCTCATCCGCCGATGCGTCGCCCGACGGCGCAGCCCCCAACGAGTACACCGTCGACGAGCT CGCGCGCGTGACCGACACGACCGTGCGCAACGTCCGCGCCTACCAGGACCGCGGCTTGCTCGCGCCGCCGCGCAAGCGCG GCCGCGTGGGCATCTACGACGACACGCACGTGGCCCGGCTCAAGGTGATCAACCACCTGCTGGCACGCGGCTACACGCTC GCCAACATTCAGGATCTGATCAAGGCGATCGACGAGGGCCACGACCTGCGCTCGATCCTCGGCCTCGAGAACGCGATCGG CGGGCGCTGGTCGCACGAGCGTCCGAAGACCTATTCGCTGGCCGACCTGGTGGGCATGTTCGGCCCGCAGACGCCGGCCT CGCTCGCGCGCGTGACCGAACTCGGGCTGCTGGAGCGGCGCGGGCTGTCGTTCGTGGCGAAGACGCCGGGGCTGATCGAA GCGGCCGCCGCGCTGGTGCGCGAGGGCATTCCGGTGCGCGAGCTGGTGGACGCGATCATGATCGCGCGGCCGCACTTCGA CGCGATCGCGCGGGTGCTGGTGGACCTCGTGGTGCGCCGCCTCGACCGCTACGACGAAGGCTCGCTGCCGCCCGTCACCG AGGTGCCGGCGCTGGTCGAGGCGATCTGGCGGGTGCGGCCGCTGTCGGCCACCTTCGTCGAGGGCGAGATGAACCGCGCG CTCGAGGCGGCCTCGGGCGACTACCTCGGCGGACGCGTGGCGACCATCCTCGACAAGCAGCTGAGCGGCGCCGCCCGCGA CGAAGCCGGCAAGGCCGGCAAGGCCGGCGGCGAGGCGCCCGGCGGCGCGCGCGAGAAACCATAG
Upstream 100 bases:
>100_bases CCGTATCGCCAAAATACTTGATCTTGCGCAGACTCATGGCCGAAATCGACAGCCGGCTGTCGCGCGCGACGATCCCGCGC ACACACGCTAAAATCCGCAC
Downstream 100 bases:
>100_bases TCAGGCCGCCGTCATATTGATTTCGGCAATGCTTGGTTGGGCCGGGCGGACGCCCATGCGACGATTTTTCGACTGCGGCG GCATGGTTCGGCATGCCGCC
Product: MerR family transcriptional regulator
Products: NA
Alternate protein names: MerR-Family Transcriptional Regulator; Transcriptional Regulator MerR Family; Regulatory Protein MerR; Transcriptional Regulator MerR Family Protein; Transcriptional Regulator; TRANSCRIPTIONal REGULATOR MerR Family; Merr Family Transcriptional Regulator; Regulatory Protein MerR Family
Number of amino acids: Translated: 287; Mature: 286
Protein sequence:
>287_residues MPTPTPPSSADASPDGAAPNEYTVDELARVTDTTVRNVRAYQDRGLLAPPRKRGRVGIYDDTHVARLKVINHLLARGYTL ANIQDLIKAIDEGHDLRSILGLENAIGGRWSHERPKTYSLADLVGMFGPQTPASLARVTELGLLERRGLSFVAKTPGLIE AAAALVREGIPVRELVDAIMIARPHFDAIARVLVDLVVRRLDRYDEGSLPPVTEVPALVEAIWRVRPLSATFVEGEMNRA LEAASGDYLGGRVATILDKQLSGAARDEAGKAGKAGGEAPGGAREKP
Sequences:
>Translated_287_residues MPTPTPPSSADASPDGAAPNEYTVDELARVTDTTVRNVRAYQDRGLLAPPRKRGRVGIYDDTHVARLKVINHLLARGYTL ANIQDLIKAIDEGHDLRSILGLENAIGGRWSHERPKTYSLADLVGMFGPQTPASLARVTELGLLERRGLSFVAKTPGLIE AAAALVREGIPVRELVDAIMIARPHFDAIARVLVDLVVRRLDRYDEGSLPPVTEVPALVEAIWRVRPLSATFVEGEMNRA LEAASGDYLGGRVATILDKQLSGAARDEAGKAGKAGGEAPGGAREKP >Mature_286_residues PTPTPPSSADASPDGAAPNEYTVDELARVTDTTVRNVRAYQDRGLLAPPRKRGRVGIYDDTHVARLKVINHLLARGYTLA NIQDLIKAIDEGHDLRSILGLENAIGGRWSHERPKTYSLADLVGMFGPQTPASLARVTELGLLERRGLSFVAKTPGLIEA AAALVREGIPVRELVDAIMIARPHFDAIARVLVDLVVRRLDRYDEGSLPPVTEVPALVEAIWRVRPLSATFVEGEMNRAL EAASGDYLGGRVATILDKQLSGAARDEAGKAGKAGGEAPGGAREKP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30814; Mature: 30682
Theoretical pI: Translated: 7.10; Mature: 7.10
Prosite motif: PS50937 HTH_MERR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTPTPPSSADASPDGAAPNEYTVDELARVTDTTVRNVRAYQDRGLLAPPRKRGRVGIYD CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCC DTHVARLKVINHLLARGYTLANIQDLIKAIDEGHDLRSILGLENAIGGRWSHERPKTYSL CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCHHH ADLVGMFGPQTPASLARVTELGLLERRGLSFVAKTPGLIEAAAALVREGIPVRELVDAIM HHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHH IARPHFDAIARVLVDLVVRRLDRYDEGSLPPVTEVPALVEAIWRVRPLSATFVEGEMNRA HCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHH LEAASGDYLGGRVATILDKQLSGAARDEAGKAGKAGGEAPGGAREKP HHHHCCCCCCCHHHHHHHHHHHCHHHHHCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure PTPTPPSSADASPDGAAPNEYTVDELARVTDTTVRNVRAYQDRGLLAPPRKRGRVGIYD CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCC DTHVARLKVINHLLARGYTLANIQDLIKAIDEGHDLRSILGLENAIGGRWSHERPKTYSL CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCHHH ADLVGMFGPQTPASLARVTELGLLERRGLSFVAKTPGLIEAAAALVREGIPVRELVDAIM HHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHH IARPHFDAIARVLVDLVVRRLDRYDEGSLPPVTEVPALVEAIWRVRPLSATFVEGEMNRA HCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHH LEAASGDYLGGRVATILDKQLSGAARDEAGKAGKAGGEAPGGAREKP HHHHCCCCCCCHHHHHHHHHHHCHHHHHCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA