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The map label for this gene is ydeP [H]

Identifier: 238024751

GI number: 238024751

Start: 1777588

End: 1779918

Strand: Direct

Name: ydeP [H]

Synonym: bglu_2g13880

Alternate gene names: 238024751

Gene position: 1777588-1779918 (Clockwise)

Preceding gene: 238024748

Following gene: 238024752

Centisome position: 62.87

GC content: 69.8

Gene sequence:

>2331_bases
ATGAAGAAGAAAGCTCCGATTCCGCGCATCGAACCCTATCATCACGCCGCCGCCGGTTGGGGCGCGGTCAAGCAGGTGGC
CATCAACCTGATCAAGGAACGCGTGGCGGGCGGCAACTACCGCACGCTGTTCAAGCAGAACCAGCCGGACGGCTTCGACT
GCCCGGGCTGCGCCTGGCCGGACCGCCAGCACGCCTCCACCTTCGAGTTCTGCGAGAACGGCGTGAAGGCGGTGGCCGCC
GAGGCCACCTCGAAGCGCGCGACGCCGGCGTTCTTCGCCGCGCACACCGTCACCGCGCTGCTCGACCAGTCCGACTACGA
GCTGGAGCAGCACGGCCGGCTGACCGACCCGATGGTCTACGACGCGGCCAGCGACCGCTACGTGCCGATCGCCTGGGACG
ACGCGTTCACGCTGATCGCGCGCCACCTGAAGGCGCTCGACGATCCGAACCGCGCCGCCTTCTACACCTCGGGCCGCGCC
AGCAACGAGGCCGCGTTCCTCTACCAGCTGATGGTGCGCCGCTTCGGCACCAACAACTTCCCCGACTGCTCGAACATGTG
CCACGAGGCCACCAGCCGCGGGCTGCCGGCCAGCGTCGGGGTCGGCAAGGGCACGGTGACGCTCGACGATTTCGAGCACG
CCGACCTGCTGCTGATCTTCGGCCAGAATCCGGCCACCAACCACCCGCGCATGCTCGGCGAGCTGCGCGAGTGCGCCAAG
CGCGGCGCGAAGATCGTCTCGATCAACCCGCTCAGGGAGCGCGGCCTCGAGCGCTTTTCCGACCCGCAGAGCCCGCTCGA
GATGCTGACCATGGGCAGCACCAGGATCGCCACCAGCTTCGTGCAGCCCACCATCGGCGGCGACTTCGCGCTGATCAAGG
GCATTGCCAAGCGCGTGCTCGAGCTCGACGACGCGGCCGTGCTGGCCGGCGAGCCGCGCGTGCTCGACGTGGCCTTCATC
GACGCGCACGGCGCCGGCTTCGACGCGTTCGCCGCCGATCTGCGTGCCGAAAGCTGGGCCGCGCTGAGCGCCGAGAGCGG
CGTGTCCTACCAGCAGATCGATTCGCTCGCGCGGCTCTACGCCTCGAGCGAGCGCGTGATCGCCACCTGGGGCATGGGCA
TCACGCAGCACAAGCATTCGGTGCAGACCATCCACATGCTGTCGAACCTGATGCTGATGCGCGGCAACATCGGCCGCCGG
GGCGCCGGCCTCTGCCCCGTGCGCGGCCACTCGAACGTGCAGGGCAACCGCACGGTGGGCATCGAGGAAAAGCCGGGCGC
GGCGTTCCTCGACCGGCTCGGCCAGGTCTACGGCTTCGCGCCGCCGCGCCGCCACGGCTACGACGTGGTGGAAACCATCG
AGGCGCTGCTGGACGGCCGCGTCAACGTGTTCATCGGCCTGGGCGGCAACTTCGCGATGGCCACGCCCGACACGCCGCGC
ACCTGGGAGGGCCTGCGCCGCTGCGCGCTGACGGTGCACATCACCACCAAGCTGAACCGCAGCCACCTGATCCACGGCAG
CGACGCGCTGATCCTGCCCACCCTCGGGCGCACCGAGATCGACCTGCAGAACGGCGTCGCGCAGGGCGTGACGGTGGAGG
ATTCGATGAGCATGGTCCACGTCTCGTACGGGATGAACCAGCCGGCCTCGCCGAACCTGCTGTCGGAGACCGCGATCGTC
GCGCGCATGGCGATGGCGCTGTTCGGCCCCGACGATACGGTGGACTGGCGCGGCTACCTGAACGACTATGCGCGCGTGCG
CGACGCGATCGAGGCCACCCTGCCCGGCTTCGAGAACTACAACGCGCGGATCGCGCAGCCGGGTGGCTTCCACCTGCGGG
TCGCCTCGCGCGAGCGCGAATGGCTCACGCCGAACGGCAAGGCCAACTTCATCGCCCACGCGCTGCCGACCGACTCGCCG
ATCCACCGCGCCCGCGCGCGCCACGGCGAGAAGCTGCTGACGCTGATGACGACGCGCTCGCACGACCAGTACAACACCAC
CATCTACGCGCTCGACGACCGCTACCGCGGCGTGTTCGGCCAGCGCCGCGTGGTGTTCGCGAACCGCGACGACCTGGCGA
TGCTCGGCCTGCGGGCCGGCGAACGGGTGGACCTGGAGACGGTCTGGCACGACGGCATCGAGCGCCGCGCCGAGGGCTTC
CTGCTGGTCGAGTACGACATCCCGCGCGGCTGCCTCGGCGCCTATTACCCGGAAACGAATCCGCTGGTGCCGCTCGACAG
CACGGCCGACATCGCCAACACGCCCACCTCGAAGTCGATCCCGGTGCTGCTGCACCGCTCGGCGGCCGGTGCCGCGCGCG
CGGCGGCCTGA

Upstream 100 bases:

>100_bases
ACTCTTTTTGCGATGGATCAGGTGTGTACCCATGAGACATGACGCCGCAAGTACGCTCTGACCATCGCCGCCAGAGGCGG
CCCATGTAACGGCTTGAGCC

Downstream 100 bases:

>100_bases
ACCCGAGGCGGCGGCGCCCGGAAGCGCCGCCGGGCATCGCGGCCGCGCCGCCAGCATGGCCGCGAACGGCCCGATGCAAA
CGGGCCGATGCAAACGGCCC

Product: oxidoreductase alpha (molybdopterin) subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 776; Mature: 776

Protein sequence:

>776_residues
MKKKAPIPRIEPYHHAAAGWGAVKQVAINLIKERVAGGNYRTLFKQNQPDGFDCPGCAWPDRQHASTFEFCENGVKAVAA
EATSKRATPAFFAAHTVTALLDQSDYELEQHGRLTDPMVYDAASDRYVPIAWDDAFTLIARHLKALDDPNRAAFYTSGRA
SNEAAFLYQLMVRRFGTNNFPDCSNMCHEATSRGLPASVGVGKGTVTLDDFEHADLLLIFGQNPATNHPRMLGELRECAK
RGAKIVSINPLRERGLERFSDPQSPLEMLTMGSTRIATSFVQPTIGGDFALIKGIAKRVLELDDAAVLAGEPRVLDVAFI
DAHGAGFDAFAADLRAESWAALSAESGVSYQQIDSLARLYASSERVIATWGMGITQHKHSVQTIHMLSNLMLMRGNIGRR
GAGLCPVRGHSNVQGNRTVGIEEKPGAAFLDRLGQVYGFAPPRRHGYDVVETIEALLDGRVNVFIGLGGNFAMATPDTPR
TWEGLRRCALTVHITTKLNRSHLIHGSDALILPTLGRTEIDLQNGVAQGVTVEDSMSMVHVSYGMNQPASPNLLSETAIV
ARMAMALFGPDDTVDWRGYLNDYARVRDAIEATLPGFENYNARIAQPGGFHLRVASREREWLTPNGKANFIAHALPTDSP
IHRARARHGEKLLTLMTTRSHDQYNTTIYALDDRYRGVFGQRRVVFANRDDLAMLGLRAGERVDLETVWHDGIERRAEGF
LLVEYDIPRGCLGAYYPETNPLVPLDSTADIANTPTSKSIPVLLHRSAAGAARAAA

Sequences:

>Translated_776_residues
MKKKAPIPRIEPYHHAAAGWGAVKQVAINLIKERVAGGNYRTLFKQNQPDGFDCPGCAWPDRQHASTFEFCENGVKAVAA
EATSKRATPAFFAAHTVTALLDQSDYELEQHGRLTDPMVYDAASDRYVPIAWDDAFTLIARHLKALDDPNRAAFYTSGRA
SNEAAFLYQLMVRRFGTNNFPDCSNMCHEATSRGLPASVGVGKGTVTLDDFEHADLLLIFGQNPATNHPRMLGELRECAK
RGAKIVSINPLRERGLERFSDPQSPLEMLTMGSTRIATSFVQPTIGGDFALIKGIAKRVLELDDAAVLAGEPRVLDVAFI
DAHGAGFDAFAADLRAESWAALSAESGVSYQQIDSLARLYASSERVIATWGMGITQHKHSVQTIHMLSNLMLMRGNIGRR
GAGLCPVRGHSNVQGNRTVGIEEKPGAAFLDRLGQVYGFAPPRRHGYDVVETIEALLDGRVNVFIGLGGNFAMATPDTPR
TWEGLRRCALTVHITTKLNRSHLIHGSDALILPTLGRTEIDLQNGVAQGVTVEDSMSMVHVSYGMNQPASPNLLSETAIV
ARMAMALFGPDDTVDWRGYLNDYARVRDAIEATLPGFENYNARIAQPGGFHLRVASREREWLTPNGKANFIAHALPTDSP
IHRARARHGEKLLTLMTTRSHDQYNTTIYALDDRYRGVFGQRRVVFANRDDLAMLGLRAGERVDLETVWHDGIERRAEGF
LLVEYDIPRGCLGAYYPETNPLVPLDSTADIANTPTSKSIPVLLHRSAAGAARAAA
>Mature_776_residues
MKKKAPIPRIEPYHHAAAGWGAVKQVAINLIKERVAGGNYRTLFKQNQPDGFDCPGCAWPDRQHASTFEFCENGVKAVAA
EATSKRATPAFFAAHTVTALLDQSDYELEQHGRLTDPMVYDAASDRYVPIAWDDAFTLIARHLKALDDPNRAAFYTSGRA
SNEAAFLYQLMVRRFGTNNFPDCSNMCHEATSRGLPASVGVGKGTVTLDDFEHADLLLIFGQNPATNHPRMLGELRECAK
RGAKIVSINPLRERGLERFSDPQSPLEMLTMGSTRIATSFVQPTIGGDFALIKGIAKRVLELDDAAVLAGEPRVLDVAFI
DAHGAGFDAFAADLRAESWAALSAESGVSYQQIDSLARLYASSERVIATWGMGITQHKHSVQTIHMLSNLMLMRGNIGRR
GAGLCPVRGHSNVQGNRTVGIEEKPGAAFLDRLGQVYGFAPPRRHGYDVVETIEALLDGRVNVFIGLGGNFAMATPDTPR
TWEGLRRCALTVHITTKLNRSHLIHGSDALILPTLGRTEIDLQNGVAQGVTVEDSMSMVHVSYGMNQPASPNLLSETAIV
ARMAMALFGPDDTVDWRGYLNDYARVRDAIEATLPGFENYNARIAQPGGFHLRVASREREWLTPNGKANFIAHALPTDSP
IHRARARHGEKLLTLMTTRSHDQYNTTIYALDDRYRGVFGQRRVVFANRDDLAMLGLRAGERVDLETVWHDGIERRAEGF
LLVEYDIPRGCLGAYYPETNPLVPLDSTADIANTPTSKSIPVLLHRSAAGAARAAA

Specific function: Probably involved in acid resistance [H]

COG id: COG0243

COG function: function code C; Anaerobic dehydrogenases, typically selenocysteine-containing

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prokaryotic molybdopterin-containing oxidoreductase family [H]

Homologues:

Organism=Escherichia coli, GI1787778, Length=769, Percent_Identity=51.4954486345904, Blast_Score=783, Evalue=0.0,
Organism=Escherichia coli, GI3868721, Length=353, Percent_Identity=27.4787535410765, Blast_Score=145, Evalue=1e-35,
Organism=Escherichia coli, GI1788534, Length=407, Percent_Identity=25.5528255528256, Blast_Score=94, Evalue=3e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009010
- InterPro:   IPR006657
- InterPro:   IPR006656
- InterPro:   IPR010046 [H]

Pfam domain/function: PF00384 Molybdopterin; PF01568 Molydop_binding [H]

EC number: NA

Molecular weight: Translated: 85016; Mature: 85016

Theoretical pI: Translated: 7.19; Mature: 7.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKAPIPRIEPYHHAAAGWGAVKQVAINLIKERVAGGNYRTLFKQNQPDGFDCPGCAWP
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCC
DRQHASTFEFCENGVKAVAAEATSKRATPAFFAAHTVTALLDQSDYELEQHGRLTDPMVY
CCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHCCCCCCCEEE
DAASDRYVPIAWDDAFTLIARHLKALDDPNRAAFYTSGRASNEAAFLYQLMVRRFGTNNF
ECCCCCEEEEEECHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCC
PDCSNMCHEATSRGLPASVGVGKGTVTLDDFEHADLLLIFGQNPATNHPRMLGELRECAK
CCHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCEEEEECCCCCCCCHHHHHHHHHHHH
RGAKIVSINPLRERGLERFSDPQSPLEMLTMGSTRIATSFVQPTIGGDFALIKGIAKRVL
CCCEEEEECHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHH
ELDDAAVLAGEPRVLDVAFIDAHGAGFDAFAADLRAESWAALSAESGVSYQQIDSLARLY
HCCCCEEECCCCCEEEEEEEECCCCCHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHH
ASSERVIATWGMGITQHKHSVQTIHMLSNLMLMRGNIGRRGAGLCPVRGHSNVQGNRTVG
CCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEC
IEEKPGAAFLDRLGQVYGFAPPRRHGYDVVETIEALLDGRVNVFIGLGGNFAMATPDTPR
CCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCEEEEEEECCCEEECCCCCCH
TWEGLRRCALTVHITTKLNRSHLIHGSDALILPTLGRTEIDLQNGVAQGVTVEDSMSMVH
HHHHHHHEEEEEEEEEECCCCEEEECCCEEEEECCCCCEEEHHCCCCCCCEEECCCCEEE
VSYGMNQPASPNLLSETAIVARMAMALFGPDDTVDWRGYLNDYARVRDAIEATLPGFENY
EECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC
NARIAQPGGFHLRVASREREWLTPNGKANFIAHALPTDSPIHRARARHGEKLLTLMTTRS
CCEEECCCCEEEEEECCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHCCCEEEEEEECCC
HDQYNTTIYALDDRYRGVFGQRRVVFANRDDLAMLGLRAGERVDLETVWHDGIERRAEGF
CCCCCCEEEEECCCCCCCCCCCEEEEECCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCE
LLVEYDIPRGCLGAYYPETNPLVPLDSTADIANTPTSKSIPVLLHRSAAGAARAAA
EEEEECCCCCHHHCCCCCCCCEECCCCCCCCCCCCCCCCCCEEEECCCCCCHHCCC
>Mature Secondary Structure
MKKKAPIPRIEPYHHAAAGWGAVKQVAINLIKERVAGGNYRTLFKQNQPDGFDCPGCAWP
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCC
DRQHASTFEFCENGVKAVAAEATSKRATPAFFAAHTVTALLDQSDYELEQHGRLTDPMVY
CCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHCCCCCCCEEE
DAASDRYVPIAWDDAFTLIARHLKALDDPNRAAFYTSGRASNEAAFLYQLMVRRFGTNNF
ECCCCCEEEEEECHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCC
PDCSNMCHEATSRGLPASVGVGKGTVTLDDFEHADLLLIFGQNPATNHPRMLGELRECAK
CCHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCEEEEECCCCCCCCHHHHHHHHHHHH
RGAKIVSINPLRERGLERFSDPQSPLEMLTMGSTRIATSFVQPTIGGDFALIKGIAKRVL
CCCEEEEECHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHH
ELDDAAVLAGEPRVLDVAFIDAHGAGFDAFAADLRAESWAALSAESGVSYQQIDSLARLY
HCCCCEEECCCCCEEEEEEEECCCCCHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHH
ASSERVIATWGMGITQHKHSVQTIHMLSNLMLMRGNIGRRGAGLCPVRGHSNVQGNRTVG
CCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEC
IEEKPGAAFLDRLGQVYGFAPPRRHGYDVVETIEALLDGRVNVFIGLGGNFAMATPDTPR
CCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCEEEEEEECCCEEECCCCCCH
TWEGLRRCALTVHITTKLNRSHLIHGSDALILPTLGRTEIDLQNGVAQGVTVEDSMSMVH
HHHHHHHEEEEEEEEEECCCCEEEECCCEEEEECCCCCEEEHHCCCCCCCEEECCCCEEE
VSYGMNQPASPNLLSETAIVARMAMALFGPDDTVDWRGYLNDYARVRDAIEATLPGFENY
EECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC
NARIAQPGGFHLRVASREREWLTPNGKANFIAHALPTDSPIHRARARHGEKLLTLMTTRS
CCEEECCCCEEEEEECCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHCCCEEEEEEECCC
HDQYNTTIYALDDRYRGVFGQRRVVFANRDDLAMLGLRAGERVDLETVWHDGIERRAEGF
CCCCCCEEEEECCCCCCCCCCCEEEEECCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCE
LLVEYDIPRGCLGAYYPETNPLVPLDSTADIANTPTSKSIPVLLHRSAAGAARAAA
EEEEECCCCCHHHCCCCCCCCEECCCCCCCCCCCCCCCCCCEEEECCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]