Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
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Accession | NC_012721 |
Length | 2,827,333 |
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The map label for this gene is 238024728
Identifier: 238024728
GI number: 238024728
Start: 1751431
End: 1751925
Strand: Direct
Name: 238024728
Synonym: bglu_2g13650
Alternate gene names: NA
Gene position: 1751431-1751925 (Clockwise)
Preceding gene: 238024719
Following gene: 238024730
Centisome position: 61.95
GC content: 71.92
Gene sequence:
>495_bases ATGGACGACACGCGACTCGCCGCACACCATGCTTCGCCGATCGACGACCCGCTCGCGGGCGATCCCGATACCGCCGAACG CATCATCCTGACCGCCGTGCGGATCTGGCTGCATCCCGATGCCGCCTGCGCCAACCCCGCGAGCGCGCGGCGGCCCCCTA CCTGGCGCGACGTGCTGGCCGAGGCCGGCGTCCATGCCGACGGCCTGGACCACTTCGACATGATGATGTGCGCGCTCGCC GGTTCGGCGGCACGCCCGCTCGACATGCGCTGCCGCTGCGCGCGCGAGCTCGCCCACGACGAAGCCTCGCTGCTGCAGGC CATCGCGCATCTGCAGGCCACGCGCGGCGAGGCGGCGATGCGCGTGCTGAACGACTGGCTGCCCGCGTTCTCGGTGAGCG GCGTGCTCAAGCTCACGCGCTGGTTCGCGATCTCGCTGCTCGACGCCGGGCTCGAGATCCGCACGCGCGAGCGCCGCGTC ACCTACCTGCACTGA
Upstream 100 bases:
>100_bases CCCGTCGTCAGCCGTCGTGCTGGCGCGCGGCCCGCATCCTTTCCGCGGAGCGGCACGCGCCGGCCCCGCCCCTACCCATC ATCGAATTCCTGGAGGTGCC
Downstream 100 bases:
>100_bases GCCGCAGGCGGGGGACCGCACGCCCCCTCAGGCCTGCGCGTCGTCCGTGCCGTGGCACTTCTTGAACTTCTTGCCGCTGC CGCACGGGCAGGAATCGTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 164; Mature: 164
Protein sequence:
>164_residues MDDTRLAAHHASPIDDPLAGDPDTAERIILTAVRIWLHPDAACANPASARRPPTWRDVLAEAGVHADGLDHFDMMMCALA GSAARPLDMRCRCARELAHDEASLLQAIAHLQATRGEAAMRVLNDWLPAFSVSGVLKLTRWFAISLLDAGLEIRTRERRV TYLH
Sequences:
>Translated_164_residues MDDTRLAAHHASPIDDPLAGDPDTAERIILTAVRIWLHPDAACANPASARRPPTWRDVLAEAGVHADGLDHFDMMMCALA GSAARPLDMRCRCARELAHDEASLLQAIAHLQATRGEAAMRVLNDWLPAFSVSGVLKLTRWFAISLLDAGLEIRTRERRV TYLH >Mature_164_residues MDDTRLAAHHASPIDDPLAGDPDTAERIILTAVRIWLHPDAACANPASARRPPTWRDVLAEAGVHADGLDHFDMMMCALA GSAARPLDMRCRCARELAHDEASLLQAIAHLQATRGEAAMRVLNDWLPAFSVSGVLKLTRWFAISLLDAGLEIRTRERRV TYLH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18065; Mature: 18065
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDDTRLAAHHASPIDDPLAGDPDTAERIILTAVRIWLHPDAACANPASARRPPTWRDVLA CCCCCCCHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHH EAGVHADGLDHFDMMMCALAGSAARPLDMRCRCARELAHDEASLLQAIAHLQATRGEAAM HCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCHHHHH RVLNDWLPAFSVSGVLKLTRWFAISLLDAGLEIRTRERRVTYLH HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCC >Mature Secondary Structure MDDTRLAAHHASPIDDPLAGDPDTAERIILTAVRIWLHPDAACANPASARRPPTWRDVLA CCCCCCCHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHH EAGVHADGLDHFDMMMCALAGSAARPLDMRCRCARELAHDEASLLQAIAHLQATRGEAAM HCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCHHHHH RVLNDWLPAFSVSGVLKLTRWFAISLLDAGLEIRTRERRVTYLH HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA