Definition Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence.
Accession NC_012721
Length 2,827,333

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The map label for this gene is 238024683

Identifier: 238024683

GI number: 238024683

Start: 1690288

End: 1690800

Strand: Direct

Name: 238024683

Synonym: bglu_2g13150

Alternate gene names: NA

Gene position: 1690288-1690800 (Clockwise)

Preceding gene: 238024682

Following gene: 238024694

Centisome position: 59.78

GC content: 62.18

Gene sequence:

>513_bases
TTGGGAACGCGCCAGCCTCGATGGAGCCAGCGTCTCCAGCCCCCGGGGGGCCAGGAAACCGGCCCCAACCCGACCGACCG
CGGCAAGCTCGGATCGAAGCGACACATCGTCGTAGATGCACGCGGCATTCCTCTGGCCGTCACGATCACGGGAGCCAACC
GCCACGATTCGATGGCATTCGAGTCCACGCTCGATGCCATTCCTGCGGTACCCGGGCTGAACGGTCCGCCACGCAAGCGC
CCGAGCAAACTGCACGCTGACAAAGGGTATGACTTCGGGCGTTGTCGACGTTATCTGAGACAGCGCGGCATCAAGGCTCG
TATTGCACGCCGCGGTATCGAAAGCAGCGAACGGCTGGGCAGGCATCGTTGGGTCGTCGAGCGTACGCATGCCTGGTTCG
CCGGATTCGGCAAGCTTCGAATTCGCTTCGAACGACGCCTCGATATTCATACCGCTCTGCTTGTCCTGGCTGCCGCCGTC
ATCTGCTCCAGATTCGTGGATGACTTGTGTTAG

Upstream 100 bases:

>100_bases
TGACGTGTTGGCGACGTCTGCGAGACTGGCAAGCGGCCGGTGTATGGCGCCGGCTGCATCTGGCGATGCTGCGTCGGCTG
CGTGAGCACGACCAGATCGA

Downstream 100 bases:

>100_bases
CGACTCTAAGAAGCTCCCACGCTCTCGCAAACTCCTGCGCCAACAGATCGTCATCGCGAGTCTCTTTCACCGCGCGTTCT
AAATACGGACGAGCCTCCGA

Product: transposase, IS4 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 170; Mature: 169

Protein sequence:

>170_residues
MGTRQPRWSQRLQPPGGQETGPNPTDRGKLGSKRHIVVDARGIPLAVTITGANRHDSMAFESTLDAIPAVPGLNGPPRKR
PSKLHADKGYDFGRCRRYLRQRGIKARIARRGIESSERLGRHRWVVERTHAWFAGFGKLRIRFERRLDIHTALLVLAAAV
ICSRFVDDLC

Sequences:

>Translated_170_residues
MGTRQPRWSQRLQPPGGQETGPNPTDRGKLGSKRHIVVDARGIPLAVTITGANRHDSMAFESTLDAIPAVPGLNGPPRKR
PSKLHADKGYDFGRCRRYLRQRGIKARIARRGIESSERLGRHRWVVERTHAWFAGFGKLRIRFERRLDIHTALLVLAAAV
ICSRFVDDLC
>Mature_169_residues
GTRQPRWSQRLQPPGGQETGPNPTDRGKLGSKRHIVVDARGIPLAVTITGANRHDSMAFESTLDAIPAVPGLNGPPRKRP
SKLHADKGYDFGRCRRYLRQRGIKARIARRGIESSERLGRHRWVVERTHAWFAGFGKLRIRFERRLDIHTALLVLAAAVI
CSRFVDDLC

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 11 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002559 [H]

Pfam domain/function: PF01609 Transposase_11 [H]

EC number: NA

Molecular weight: Translated: 19150; Mature: 19019

Theoretical pI: Translated: 11.93; Mature: 11.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGTRQPRWSQRLQPPGGQETGPNPTDRGKLGSKRHIVVDARGIPLAVTITGANRHDSMAF
CCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEEECCCCCCHHHH
ESTLDAIPAVPGLNGPPRKRPSKLHADKGYDFGRCRRYLRQRGIKARIARRGIESSERLG
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHCCCHHHHHH
RHRWVVERTHAWFAGFGKLRIRFERRLDIHTALLVLAAAVICSRFVDDLC
HHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GTRQPRWSQRLQPPGGQETGPNPTDRGKLGSKRHIVVDARGIPLAVTITGANRHDSMAF
CCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEEECCCCCCHHHH
ESTLDAIPAVPGLNGPPRKRPSKLHADKGYDFGRCRRYLRQRGIKARIARRGIESSERLG
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHCCCHHHHHH
RHRWVVERTHAWFAGFGKLRIRFERRLDIHTALLVLAAAVICSRFVDDLC
HHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1650732 [H]