Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
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Accession | NC_012721 |
Length | 2,827,333 |
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The map label for this gene is 238024683
Identifier: 238024683
GI number: 238024683
Start: 1690288
End: 1690800
Strand: Direct
Name: 238024683
Synonym: bglu_2g13150
Alternate gene names: NA
Gene position: 1690288-1690800 (Clockwise)
Preceding gene: 238024682
Following gene: 238024694
Centisome position: 59.78
GC content: 62.18
Gene sequence:
>513_bases TTGGGAACGCGCCAGCCTCGATGGAGCCAGCGTCTCCAGCCCCCGGGGGGCCAGGAAACCGGCCCCAACCCGACCGACCG CGGCAAGCTCGGATCGAAGCGACACATCGTCGTAGATGCACGCGGCATTCCTCTGGCCGTCACGATCACGGGAGCCAACC GCCACGATTCGATGGCATTCGAGTCCACGCTCGATGCCATTCCTGCGGTACCCGGGCTGAACGGTCCGCCACGCAAGCGC CCGAGCAAACTGCACGCTGACAAAGGGTATGACTTCGGGCGTTGTCGACGTTATCTGAGACAGCGCGGCATCAAGGCTCG TATTGCACGCCGCGGTATCGAAAGCAGCGAACGGCTGGGCAGGCATCGTTGGGTCGTCGAGCGTACGCATGCCTGGTTCG CCGGATTCGGCAAGCTTCGAATTCGCTTCGAACGACGCCTCGATATTCATACCGCTCTGCTTGTCCTGGCTGCCGCCGTC ATCTGCTCCAGATTCGTGGATGACTTGTGTTAG
Upstream 100 bases:
>100_bases TGACGTGTTGGCGACGTCTGCGAGACTGGCAAGCGGCCGGTGTATGGCGCCGGCTGCATCTGGCGATGCTGCGTCGGCTG CGTGAGCACGACCAGATCGA
Downstream 100 bases:
>100_bases CGACTCTAAGAAGCTCCCACGCTCTCGCAAACTCCTGCGCCAACAGATCGTCATCGCGAGTCTCTTTCACCGCGCGTTCT AAATACGGACGAGCCTCCGA
Product: transposase, IS4 family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 170; Mature: 169
Protein sequence:
>170_residues MGTRQPRWSQRLQPPGGQETGPNPTDRGKLGSKRHIVVDARGIPLAVTITGANRHDSMAFESTLDAIPAVPGLNGPPRKR PSKLHADKGYDFGRCRRYLRQRGIKARIARRGIESSERLGRHRWVVERTHAWFAGFGKLRIRFERRLDIHTALLVLAAAV ICSRFVDDLC
Sequences:
>Translated_170_residues MGTRQPRWSQRLQPPGGQETGPNPTDRGKLGSKRHIVVDARGIPLAVTITGANRHDSMAFESTLDAIPAVPGLNGPPRKR PSKLHADKGYDFGRCRRYLRQRGIKARIARRGIESSERLGRHRWVVERTHAWFAGFGKLRIRFERRLDIHTALLVLAAAV ICSRFVDDLC >Mature_169_residues GTRQPRWSQRLQPPGGQETGPNPTDRGKLGSKRHIVVDARGIPLAVTITGANRHDSMAFESTLDAIPAVPGLNGPPRKRP SKLHADKGYDFGRCRRYLRQRGIKARIARRGIESSERLGRHRWVVERTHAWFAGFGKLRIRFERRLDIHTALLVLAAAVI CSRFVDDLC
Specific function: Involved in the transposition of the insertion sequence [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase 11 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002559 [H]
Pfam domain/function: PF01609 Transposase_11 [H]
EC number: NA
Molecular weight: Translated: 19150; Mature: 19019
Theoretical pI: Translated: 11.93; Mature: 11.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTRQPRWSQRLQPPGGQETGPNPTDRGKLGSKRHIVVDARGIPLAVTITGANRHDSMAF CCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEEECCCCCCHHHH ESTLDAIPAVPGLNGPPRKRPSKLHADKGYDFGRCRRYLRQRGIKARIARRGIESSERLG HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHCCCHHHHHH RHRWVVERTHAWFAGFGKLRIRFERRLDIHTALLVLAAAVICSRFVDDLC HHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure GTRQPRWSQRLQPPGGQETGPNPTDRGKLGSKRHIVVDARGIPLAVTITGANRHDSMAF CCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEEECCCCCCHHHH ESTLDAIPAVPGLNGPPRKRPSKLHADKGYDFGRCRRYLRQRGIKARIARRGIESSERLG HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHCCCHHHHHH RHRWVVERTHAWFAGFGKLRIRFERRLDIHTALLVLAAAVICSRFVDDLC HHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1650732 [H]