Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
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Accession | NC_012721 |
Length | 2,827,333 |
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The map label for this gene is 238024682
Identifier: 238024682
GI number: 238024682
Start: 1687655
End: 1689004
Strand: Direct
Name: 238024682
Synonym: bglu_2g13110
Alternate gene names: NA
Gene position: 1687655-1689004 (Clockwise)
Preceding gene: 238024681
Following gene: 238024683
Centisome position: 59.69
GC content: 64.0
Gene sequence:
>1350_bases ATGGCCAACCTGGCTCAGGCCCGCACCGACGAGGATCTCGACCTGTCGACACTCGCCATTCCCGATCACGCACGCATGCC GCCCTTCGCGCTGACGATGGCGTGGTGGGCCGTCTGCAGCGCGGTGTTCTACATCGTCGTCGGCGCTACGCTGGCGCTCA CCTACGGCGCGCGCAACGCGCTGATCGGGATGGCGCTGTCGGTTGTCTCGTACGGCATCGTCAATTCGATCATCAGCCGC TACGCGATCCGTACCGGTCTGTCGGTCGCGCTGTTCTCGCGCGTGCTGTTCGGCAGCGCGGGCGCGGCGCTCGCGACGCT GATCTTCTTCGCGACCGCGATCTACTACGCGGTGTTCGAGGGCTCCGTGATCGCGGTCGCCGCGCATCACCAGTTTCCGG CGCTCGACTACAAGTGGGCCGCGCTGATCGTCGTCTGCTACAGCGTGCCACTCGTGTTCGGCAGCGTGCAGCACTGGCTC GACAAGTTCAACGGCGTACTGCTGCCGTTCTACCTGTTCGGGTTGCTCGCGTCGGTCGGGCTGGCGACGGCCGAGTACGG CTATCACGCCGCGTGGCTCGACTTCGGGCCGGCTGGCGGCGCCCCGGCCGGCGGCTGGTGGCAATGCTTCGTCTACTACA TGGGCGTGTGGGTCCTGATGATGTTTACGTTCGACTACGCGCGCTTCGGCCGCAAGGCCGACGCCCGCTATCACGGCAGC TTCAACTTCGGGATGCCGTTCTACCTCATCACATTCCTCGTCAACGGCGCGGCCGGCATCTATCTCGTCAGCACGATTCC CGGGCTCGGCACGCTGTCGGAAGTATCAGTCGTGCTCGCGCTGCTGAAGCTGATGGGCGTATGGGGGCTGCTGTTCGTGT GGGTCACGCAGTCGCGCATCAATACCGCGAACTACTACCTCGCAACCGTCAACATGCAGGCGTTCTTCCAGAGGGTCACC GGGCTGCGCGCACCGAAGTTCGTGTGGGCCGTCGTGGTCGGCGCGGTGGTCTATGCACTGATGATGGCCGACATCTTCTC GCGGATCCTGCAAGCGCTCGCGTACCAGGGCATCTTCGTCGTAGCCTGGGTCGGCGTCGCGCTCGCGCACATCCTGTCGG CGCGCTACGGGCAGCCCGTCGGCGACGACGTCGAATGCCTCGACGCGCATGTGCCGGTGTTCAATCCAAATGGTTTGATC GCGTGGTTCGCGGGCGCTTTCGCGGGACTCGCGCTGAATCAGGCAACTGGATTTGCCGCGTCGCTGTCAGCACCGATGAC GTTCGTCCTATCCTGCATGATTTACATTGGCTTGCTAGCTCGTGTGAAGATGTTTGCTCGGGGCATATAA
Upstream 100 bases:
>100_bases GCCGAACCGGTTGCCCGCCCCGACGTCGGGGCAACCCCGCGGCCCGCATGGGCCGCGGCCGAGACGTCGTCCGCTGTTCT GCTCATCGAGGAGCACGCTC
Downstream 100 bases:
>100_bases ATAGATCCGTTGTCTGAGGGGACACGAAACTGGAATGCCGATTCGAGGGCCACGGCGATCAAACCTGAGAGCGTGTTATG CACTTTCAAATGTACTGAGC
Product: cytosine/purines uracil, thiamine, allantoin permease
Products: NA
Alternate protein names: Permease; Permease For Cytosine/Purines
Number of amino acids: Translated: 449; Mature: 448
Protein sequence:
>449_residues MANLAQARTDEDLDLSTLAIPDHARMPPFALTMAWWAVCSAVFYIVVGATLALTYGARNALIGMALSVVSYGIVNSIISR YAIRTGLSVALFSRVLFGSAGAALATLIFFATAIYYAVFEGSVIAVAAHHQFPALDYKWAALIVVCYSVPLVFGSVQHWL DKFNGVLLPFYLFGLLASVGLATAEYGYHAAWLDFGPAGGAPAGGWWQCFVYYMGVWVLMMFTFDYARFGRKADARYHGS FNFGMPFYLITFLVNGAAGIYLVSTIPGLGTLSEVSVVLALLKLMGVWGLLFVWVTQSRINTANYYLATVNMQAFFQRVT GLRAPKFVWAVVVGAVVYALMMADIFSRILQALAYQGIFVVAWVGVALAHILSARYGQPVGDDVECLDAHVPVFNPNGLI AWFAGAFAGLALNQATGFAASLSAPMTFVLSCMIYIGLLARVKMFARGI
Sequences:
>Translated_449_residues MANLAQARTDEDLDLSTLAIPDHARMPPFALTMAWWAVCSAVFYIVVGATLALTYGARNALIGMALSVVSYGIVNSIISR YAIRTGLSVALFSRVLFGSAGAALATLIFFATAIYYAVFEGSVIAVAAHHQFPALDYKWAALIVVCYSVPLVFGSVQHWL DKFNGVLLPFYLFGLLASVGLATAEYGYHAAWLDFGPAGGAPAGGWWQCFVYYMGVWVLMMFTFDYARFGRKADARYHGS FNFGMPFYLITFLVNGAAGIYLVSTIPGLGTLSEVSVVLALLKLMGVWGLLFVWVTQSRINTANYYLATVNMQAFFQRVT GLRAPKFVWAVVVGAVVYALMMADIFSRILQALAYQGIFVVAWVGVALAHILSARYGQPVGDDVECLDAHVPVFNPNGLI AWFAGAFAGLALNQATGFAASLSAPMTFVLSCMIYIGLLARVKMFARGI >Mature_448_residues ANLAQARTDEDLDLSTLAIPDHARMPPFALTMAWWAVCSAVFYIVVGATLALTYGARNALIGMALSVVSYGIVNSIISRY AIRTGLSVALFSRVLFGSAGAALATLIFFATAIYYAVFEGSVIAVAAHHQFPALDYKWAALIVVCYSVPLVFGSVQHWLD KFNGVLLPFYLFGLLASVGLATAEYGYHAAWLDFGPAGGAPAGGWWQCFVYYMGVWVLMMFTFDYARFGRKADARYHGSF NFGMPFYLITFLVNGAAGIYLVSTIPGLGTLSEVSVVLALLKLMGVWGLLFVWVTQSRINTANYYLATVNMQAFFQRVTG LRAPKFVWAVVVGAVVYALMMADIFSRILQALAYQGIFVVAWVGVALAHILSARYGQPVGDDVECLDAHVPVFNPNGLIA WFAGAFAGLALNQATGFAASLSAPMTFVLSCMIYIGLLARVKMFARGI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48631; Mature: 48499
Theoretical pI: Translated: 8.61; Mature: 8.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANLAQARTDEDLDLSTLAIPDHARMPPFALTMAWWAVCSAVFYIVVGATLALTYGARNA CCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH LIGMALSVVSYGIVNSIISRYAIRTGLSVALFSRVLFGSAGAALATLIFFATAIYYAVFE HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHC GSVIAVAAHHQFPALDYKWAALIVVCYSVPLVFGSVQHWLDKFNGVLLPFYLFGLLASVG CCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH LATAEYGYHAAWLDFGPAGGAPAGGWWQCFVYYMGVWVLMMFTFDYARFGRKADARYHGS HHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCC FNFGMPFYLITFLVNGAAGIYLVSTIPGLGTLSEVSVVLALLKLMGVWGLLFVWVTQSRI CCCCHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC NTANYYLATVNMQAFFQRVTGLRAPKFVWAVVVGAVVYALMMADIFSRILQALAYQGIFV CCCEEEEEEECHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH VAWVGVALAHILSARYGQPVGDDVECLDAHVPVFNPNGLIAWFAGAFAGLALNQATGFAA HHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCEECCCCHHHHHHHHHHHHHHHHHCCCHH SLSAPMTFVLSCMIYIGLLARVKMFARGI HHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure ANLAQARTDEDLDLSTLAIPDHARMPPFALTMAWWAVCSAVFYIVVGATLALTYGARNA CCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH LIGMALSVVSYGIVNSIISRYAIRTGLSVALFSRVLFGSAGAALATLIFFATAIYYAVFE HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHC GSVIAVAAHHQFPALDYKWAALIVVCYSVPLVFGSVQHWLDKFNGVLLPFYLFGLLASVG CCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH LATAEYGYHAAWLDFGPAGGAPAGGWWQCFVYYMGVWVLMMFTFDYARFGRKADARYHGS HHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCC FNFGMPFYLITFLVNGAAGIYLVSTIPGLGTLSEVSVVLALLKLMGVWGLLFVWVTQSRI CCCCHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC NTANYYLATVNMQAFFQRVTGLRAPKFVWAVVVGAVVYALMMADIFSRILQALAYQGIFV CCCEEEEEEECHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH VAWVGVALAHILSARYGQPVGDDVECLDAHVPVFNPNGLIAWFAGAFAGLALNQATGFAA HHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCEECCCCHHHHHHHHHHHHHHHHHCCCHH SLSAPMTFVLSCMIYIGLLARVKMFARGI HHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA