Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
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Accession | NC_012721 |
Length | 2,827,333 |
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The map label for this gene is nadE [H]
Identifier: 238024670
GI number: 238024670
Start: 1674330
End: 1676444
Strand: Direct
Name: nadE [H]
Synonym: bglu_2g12930
Alternate gene names: 238024670
Gene position: 1674330-1676444 (Clockwise)
Preceding gene: 238024669
Following gene: 238024671
Centisome position: 59.22
GC content: 68.42
Gene sequence:
>2115_bases ATGAACGATTTCTTCTCGATGTACCGCCACGGCTTCCTGCGGGTGGCCGTCGCCATTCCCCCCGTGGTGGTCGCCGATCC GGCCGCCAACCTCCAGGCGACGCTGCGCCTCGCGCGCGACGCAGCCGGGCGCGGCGCCCTCGTGACGATCCTGCCCGAAC TCGGCCTGTCGGCCTACACCAACGACGAGCTGTTCTTCCAGCGCGCGCTGCTCGACGGCGTGAAGCGGGCGATCGGCAAG CTGCGCGCCGCCTCGGCCGAGCTGCCCGGACTGATCGTGGCGGGCGCGCCGCTCGAATGGAGTGGCCGCCTCTACAACGC CGCGGTGGTGCTGCACCGCGGCCGGATCCTGGGCGTGGTACCGAAAAGCTACCTGCCGAACTATGGGGAGTTTTATGAGA AGCGCTACTTCGCTTCCGGGCTCGGCGTGACGGGCGGCACGCTGCGCCTGGACGGCGCCGAGGTGCCGTTCGGCACCGAC CTGCTGTTTCGCGCCGACGACTATCCGGAGCTCGTGCTCGGCGTGGAGATCTGCGAGGACCTCTGGGCGCCGGTGCCGCC GTCCACCTATGCGGCACATGCGGGCGCGACCGTGATCGCGAACCTGTCGGCCAGCAACATCACCGTCGGCAAGTCCGAGT ATCGCCGGCTTCACGTGCGCTCCCACAGCGCGCGCTGCCAGGCCGCCTATCTCTATTCGGCGGCCGGTTGCGGCGAATCC ACCACCGACCTGGCCTGGGACGGCCACGCACTCGTCTGCGAAAGCGGCGAGATACTGGCCGAAACCGAGCGCTTTGCCGA CACCGCCCAACTGCTGGTGGCCGATCTCGACCTGCAGCGCATCATGCAGGAGCGCCTGCGCGTGCAGACCTTCGACGATT GCGCGCGCGCGCTCGGCGGCAGCGCGTTCCGCAACGTCGGCTTCGCGCTCGCTCCGCCGCGCGGCCCGAGCGGGCCGCTG CAACGCCGCCTCGACCGCTTTCCGTTCGTGCCGGCGGACGTGGCGATGCTCGATGCGAACTGCGAGGAAACCTTCATGAT CCAGAGTCACGGGCTCGCCAAGCGGCTGCGCGCGACCGGGCTCGAGCAGGTCGTGATCGGCGTGTCGGGCGGGCTCGACT CCACCTATGCGCTGCTGGTCTGCGCGCTGACCATGGACCGGCTCGGCCTGGACCGCCGCAACATCCTCGCCTACACGCTG CCCGGCTACGCCACCAGCCGGCACACGCTCGACAATGCCTGGGCGCTGATGCATGTGCTAGGCGTGAGCGCGCGCGAGAT CGACATCAAGCCGGTATCGGACCGCACGTTGGCAGACATCGGCCATCCGGCCGCACAGGGTGAGGCACGCTATGACGTGA CCTACGAGAACGTCCAGGCCGGCGCACGCAGCGCCTACCTGTTTCGGCTCGCGAACGCGAATCGCGCCATCGTGATAGGC ACCGGCGACCTGTCCGAGCTGGCGCTCGGCTGGTGTACCTATGGCGTCGGCGATCAGATGTCGCATTACAACGTGAACGG CTCGGTGCCGAAAACGCTGATCCAGCAGATGGTTCGCTGGCTGGCGGACCGGCAGCGCTTTGGCGCCGATGCTGCGGGTA TCCTGCGGCGTATCGTCGAGACCGAGATCTCGCCTGAGCTGGTGCCAGGCAACGCGAGCCAGTCGACCGAGCAGGCGATC GGCCCCTACGCGTTGCAGGATTTCAACCTCTACCACGTGACGCGCTATGGCTTCGGCCCGGCGAAGATCGCATTCCTCGC ATGGCATGCGTGGCACGACGCCGAGGCCGGCGACTGGCCACCGCTGATGGACTCGCGTCCTGCCTACGATCTGGCCGCCA TCAAACGCTGGCTCGTCGTGTTCGTGAAGCGTTTCTTTGAGGGTAGTCAGTTCAAGCGCTCCGCGCTGCCCAACGGCCCG AAGGTGGCCGCCGGCAGCTCGCTGTCGCCGCGTGGCGACTGGCGCGCGCCGAGCGACTCGGTAGCGCAGGCGTGGCTCGA CGAACTGACGCGCGCGGTGTCCGATCAGCCTGCCGGCGATGAAGACCGGCGCGAACGTGCTCTGCTTGCTGGCCGACCGC TCGACGGCGAGCCTGCCGACGGAAACGCGCGATGA
Upstream 100 bases:
>100_bases GATGCGAATTACGCGCAAGTGCCGCATCGGTTACCTTCGCCGCCAGCGCGGCCGACGCCTCCCGTCATACCCCGCTCGCC CACCCCGTCCGCCCTCGCCC
Downstream 100 bases:
>100_bases TTGTAGTCTTCGGCGATCGGCACGCCGATAGCGCCGCTGAAGGCCGCGACGCGATATACCGTCAGCGTGAAGGAACGCTG CGGCTCGAACCCGTTCGATC
Product: NAD synthetase
Products: NA
Alternate protein names: NAD(+) synthase [glutamine-hydrolyzing] [H]
Number of amino acids: Translated: 704; Mature: 704
Protein sequence:
>704_residues MNDFFSMYRHGFLRVAVAIPPVVVADPAANLQATLRLARDAAGRGALVTILPELGLSAYTNDELFFQRALLDGVKRAIGK LRAASAELPGLIVAGAPLEWSGRLYNAAVVLHRGRILGVVPKSYLPNYGEFYEKRYFASGLGVTGGTLRLDGAEVPFGTD LLFRADDYPELVLGVEICEDLWAPVPPSTYAAHAGATVIANLSASNITVGKSEYRRLHVRSHSARCQAAYLYSAAGCGES TTDLAWDGHALVCESGEILAETERFADTAQLLVADLDLQRIMQERLRVQTFDDCARALGGSAFRNVGFALAPPRGPSGPL QRRLDRFPFVPADVAMLDANCEETFMIQSHGLAKRLRATGLEQVVIGVSGGLDSTYALLVCALTMDRLGLDRRNILAYTL PGYATSRHTLDNAWALMHVLGVSAREIDIKPVSDRTLADIGHPAAQGEARYDVTYENVQAGARSAYLFRLANANRAIVIG TGDLSELALGWCTYGVGDQMSHYNVNGSVPKTLIQQMVRWLADRQRFGADAAGILRRIVETEISPELVPGNASQSTEQAI GPYALQDFNLYHVTRYGFGPAKIAFLAWHAWHDAEAGDWPPLMDSRPAYDLAAIKRWLVVFVKRFFEGSQFKRSALPNGP KVAAGSSLSPRGDWRAPSDSVAQAWLDELTRAVSDQPAGDEDRRERALLAGRPLDGEPADGNAR
Sequences:
>Translated_704_residues MNDFFSMYRHGFLRVAVAIPPVVVADPAANLQATLRLARDAAGRGALVTILPELGLSAYTNDELFFQRALLDGVKRAIGK LRAASAELPGLIVAGAPLEWSGRLYNAAVVLHRGRILGVVPKSYLPNYGEFYEKRYFASGLGVTGGTLRLDGAEVPFGTD LLFRADDYPELVLGVEICEDLWAPVPPSTYAAHAGATVIANLSASNITVGKSEYRRLHVRSHSARCQAAYLYSAAGCGES TTDLAWDGHALVCESGEILAETERFADTAQLLVADLDLQRIMQERLRVQTFDDCARALGGSAFRNVGFALAPPRGPSGPL QRRLDRFPFVPADVAMLDANCEETFMIQSHGLAKRLRATGLEQVVIGVSGGLDSTYALLVCALTMDRLGLDRRNILAYTL PGYATSRHTLDNAWALMHVLGVSAREIDIKPVSDRTLADIGHPAAQGEARYDVTYENVQAGARSAYLFRLANANRAIVIG TGDLSELALGWCTYGVGDQMSHYNVNGSVPKTLIQQMVRWLADRQRFGADAAGILRRIVETEISPELVPGNASQSTEQAI GPYALQDFNLYHVTRYGFGPAKIAFLAWHAWHDAEAGDWPPLMDSRPAYDLAAIKRWLVVFVKRFFEGSQFKRSALPNGP KVAAGSSLSPRGDWRAPSDSVAQAWLDELTRAVSDQPAGDEDRRERALLAGRPLDGEPADGNAR >Mature_704_residues MNDFFSMYRHGFLRVAVAIPPVVVADPAANLQATLRLARDAAGRGALVTILPELGLSAYTNDELFFQRALLDGVKRAIGK LRAASAELPGLIVAGAPLEWSGRLYNAAVVLHRGRILGVVPKSYLPNYGEFYEKRYFASGLGVTGGTLRLDGAEVPFGTD LLFRADDYPELVLGVEICEDLWAPVPPSTYAAHAGATVIANLSASNITVGKSEYRRLHVRSHSARCQAAYLYSAAGCGES TTDLAWDGHALVCESGEILAETERFADTAQLLVADLDLQRIMQERLRVQTFDDCARALGGSAFRNVGFALAPPRGPSGPL QRRLDRFPFVPADVAMLDANCEETFMIQSHGLAKRLRATGLEQVVIGVSGGLDSTYALLVCALTMDRLGLDRRNILAYTL PGYATSRHTLDNAWALMHVLGVSAREIDIKPVSDRTLADIGHPAAQGEARYDVTYENVQAGARSAYLFRLANANRAIVIG TGDLSELALGWCTYGVGDQMSHYNVNGSVPKTLIQQMVRWLADRQRFGADAAGILRRIVETEISPELVPGNASQSTEQAI GPYALQDFNLYHVTRYGFGPAKIAFLAWHAWHDAEAGDWPPLMDSRPAYDLAAIKRWLVVFVKRFFEGSQFKRSALPNGP KVAAGSSLSPRGDWRAPSDSVAQAWLDELTRAVSDQPAGDEDRRERALLAGRPLDGEPADGNAR
Specific function: Can use both glutamine or ammonia as a nitrogen source [H]
COG id: COG0171
COG function: function code H; NAD synthase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 CN hydrolase domain [H]
Homologues:
Organism=Homo sapiens, GI41393551, Length=687, Percent_Identity=23.4352256186317, Blast_Score=97, Evalue=4e-20, Organism=Caenorhabditis elegans, GI17538756, Length=614, Percent_Identity=24.2671009771987, Blast_Score=100, Evalue=2e-21, Organism=Saccharomyces cerevisiae, GI6321865, Length=277, Percent_Identity=26.7148014440433, Blast_Score=82, Evalue=3e-16, Organism=Drosophila melanogaster, GI24641841, Length=293, Percent_Identity=24.9146757679181, Blast_Score=69, Evalue=1e-11, Organism=Drosophila melanogaster, GI24641843, Length=293, Percent_Identity=24.9146757679181, Blast_Score=69, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014445 - InterPro: IPR022310 - InterPro: IPR003694 - InterPro: IPR003010 - InterPro: IPR014729 [H]
Pfam domain/function: PF00795 CN_hydrolase; PF02540 NAD_synthase [H]
EC number: =6.3.5.1 [H]
Molecular weight: Translated: 76495; Mature: 76495
Theoretical pI: Translated: 6.40; Mature: 6.40
Prosite motif: PS50263 CN_HYDROLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDFFSMYRHGFLRVAVAIPPVVVADPAANLQATLRLARDAAGRGALVTILPELGLSAYT CCHHHHHHHHHHEEEEEECCCEEEECCCCCHHHHHHHHHHCCCCCEEEEEEHHCCCCCCC NDELFFQRALLDGVKRAIGKLRAASAELPGLIVAGAPLEWSGRLYNAAVVLHRGRILGVV CHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCEEEEEEEEECCCEEEEC PKSYLPNYGEFYEKRYFASGLGVTGGTLRLDGAEVPFGTDLLFRADDYPELVLGVEICED CHHHCCCHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCEEEECCCCCHHHHHHHHHHH LWAPVPPSTYAAHAGATVIANLSASNITVGKSEYRRLHVRSHSARCQAAYLYSAAGCGES HCCCCCCCCHHHHCCCEEEEECCCCCEEECHHHHHEEEECCCCCCCEEEEEEECCCCCCC TTDLAWDGHALVCESGEILAETERFADTAQLLVADLDLQRIMQERLRVQTFDDCARALGG CCCEEECCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCC SAFRNVGFALAPPRGPSGPLQRRLDRFPFVPADVAMLDANCEETFMIQSHGLAKRLRATG HHHHHCCEEECCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCEEEECCCCHHHHHHHCC LEQVVIGVSGGLDSTYALLVCALTMDRLGLDRRNILAYTLPGYATSRHTLDNAWALMHVL HHEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHH GVSAREIDIKPVSDRTLADIGHPAAQGEARYDVTYENVQAGARSAYLFRLANANRAIVIG CCCCCEEEEECCCCCHHHHCCCCCCCCCCEEEEEHHHHHCCCCCEEEEEEECCCEEEEEE TGDLSELALGWCTYGVGDQMSHYNVNGSVPKTLIQQMVRWLADRQRFGADAAGILRRIVE CCCHHHHHHHHHHCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH TEISPELVPGNASQSTEQAIGPYALQDFNLYHVTRYGFGPAKIAFLAWHAWHDAEAGDWP HCCCCCCCCCCCCCCHHHHCCCEEEECCCEEEEEECCCCHHHEEEEEEECCCCCCCCCCC PLMDSRPAYDLAAIKRWLVVFVKRFFEGSQFKRSALPNGPKVAAGSSLSPRGDWRAPSDS CCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHH VAQAWLDELTRAVSDQPAGDEDRRERALLAGRPLDGEPADGNAR HHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MNDFFSMYRHGFLRVAVAIPPVVVADPAANLQATLRLARDAAGRGALVTILPELGLSAYT CCHHHHHHHHHHEEEEEECCCEEEECCCCCHHHHHHHHHHCCCCCEEEEEEHHCCCCCCC NDELFFQRALLDGVKRAIGKLRAASAELPGLIVAGAPLEWSGRLYNAAVVLHRGRILGVV CHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCEEEEEEEEECCCEEEEC PKSYLPNYGEFYEKRYFASGLGVTGGTLRLDGAEVPFGTDLLFRADDYPELVLGVEICED CHHHCCCHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCEEEECCCCCHHHHHHHHHHH LWAPVPPSTYAAHAGATVIANLSASNITVGKSEYRRLHVRSHSARCQAAYLYSAAGCGES HCCCCCCCCHHHHCCCEEEEECCCCCEEECHHHHHEEEECCCCCCCEEEEEEECCCCCCC TTDLAWDGHALVCESGEILAETERFADTAQLLVADLDLQRIMQERLRVQTFDDCARALGG CCCEEECCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCC SAFRNVGFALAPPRGPSGPLQRRLDRFPFVPADVAMLDANCEETFMIQSHGLAKRLRATG HHHHHCCEEECCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCEEEECCCCHHHHHHHCC LEQVVIGVSGGLDSTYALLVCALTMDRLGLDRRNILAYTLPGYATSRHTLDNAWALMHVL HHEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHH GVSAREIDIKPVSDRTLADIGHPAAQGEARYDVTYENVQAGARSAYLFRLANANRAIVIG CCCCCEEEEECCCCCHHHHCCCCCCCCCCEEEEEHHHHHCCCCCEEEEEEECCCEEEEEE TGDLSELALGWCTYGVGDQMSHYNVNGSVPKTLIQQMVRWLADRQRFGADAAGILRRIVE CCCHHHHHHHHHHCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH TEISPELVPGNASQSTEQAIGPYALQDFNLYHVTRYGFGPAKIAFLAWHAWHDAEAGDWP HCCCCCCCCCCCCCCHHHHCCCEEEECCCEEEEEECCCCHHHEEEEEEECCCCCCCCCCC PLMDSRPAYDLAAIKRWLVVFVKRFFEGSQFKRSALPNGPKVAAGSSLSPRGDWRAPSDS CCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHH VAQAWLDELTRAVSDQPAGDEDRRERALLAGRPLDGEPADGNAR HHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]