Definition Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence.
Accession NC_012721
Length 2,827,333

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The map label for this gene is pvdQ [H]

Identifier: 238024669

GI number: 238024669

Start: 1671841

End: 1674333

Strand: Direct

Name: pvdQ [H]

Synonym: bglu_2g12920

Alternate gene names: 238024669

Gene position: 1671841-1674333 (Clockwise)

Preceding gene: 238024668

Following gene: 238024670

Centisome position: 59.13

GC content: 74.97

Gene sequence:

>2493_bases
ATGCCGCCCTCGCACGCCGCGCCGCCGCCAGCACACCTGCCCGAGCATCCGTCGTTTGCCGCCGTGCCGGCCTACGCGCC
GGTGGAAATCGTGGTGGAGATCGCGCGTAGCGCCGACGGCACGCCGCATATCCGCGCGCACGACTTCGAGTCACTCGGCT
ACGGCCACGGCTACGTGGTGGCCGACGATCACGCGGCCGTGCTGCTCGCGCACCTCGTCACGCTGCTGGGCGAGCGCAGC
CGCCACTATGGCCGCGACGAAGCGCCCGGCGACGACGCCAACCTCGACAGCGACCTCGGCTACCGCGCGCTCGACTACGG
CGGCCAGGCCGCCGGCGCGCTGGCGAGGATGTCACGCCACGCCAACGCGCTGATCGACGGCTTCGCGGCCGGCTTCAACC
GTCGCGTGAGCGAGCTCGTCGAGGCCGGCGAGCCGTTCGCGTCGATGCCTGGCGGCACGCCGCGCGTGCTGCAGCGCAAC
GACGTCGCCGCGCTGCTGCTCGCGCTGGCCGACGAGGCGAGCGGCCGGCGCTTCGTGCAGGCCCTTGCGCTGGCGCGGCC
ACCGGTGCCGACCGCGGCGCCCGACGCGCATGGCGAGGTCGCGGCGGGCGCCGACCACGCGGCTCGCGCCGACGACGCCC
GCCGCGCCGACCCGCCATGGTCGGCCCACGCCGATCTGCCGCTCGGCAGCAACGCCTGGGCAATCGGCGGCGAGGCGGCG
GCCGGCGGTGCGAGCGTGCTGATCGCCAATCCGCACTTCAGCTTCAACGACGGCTTGCGCCTCTACCAAGTGCATCTGAC
GATCCCCGGCGCGTTCGACGTGGCCGGCGTGTCGATCCTCGGCTGCCCGACCGTCAATCTCGGCTTCAACGCGTCGCTGG
CCTGGACCCACACGGTGTCGTCGGCCGAGCGATTCGTGCTGCAGCGGCTGCAGCTCGTGCCGAACGACCCGACCGCCTAC
TTCTGGGACGGCCGGCCCGAGCCGATGCAACGGCGCCGCGTCGCGATCGAGATCCGCGGCGAGGCACGGCCCCACGAGCG
CGACCTCTGGCAGACGCGCCACGGCCCGCCGCTCAGCGTGCCGGGCCTCGCCGAATGGAATCCCGAATGGGTGTTCTGCC
TCGGCAACGCGAACGCCGGCAACGCCGACGTGCTCGACCACTGGCTCGCGATCGGCGCCGCGCGCTCGCTCGACGAGTTG
GAGCAGAGCTTCGCGCGCTGGGCGGGAACGAGCTGGGTGAATCTGCTCGCGATCGACGCCGCCGGGCAGGCCTGCTACGT
CGACGGCAGCAACGTGCCCGAACTTGGCGCGGCGACGCTCGCGGCACTGGCGGACACCGACCATCCGCTCGCGCTCGAAC
GCAGACGCCGCGGCCTCGTCGTGCTGCCCGGCGACGACCCACGCCACGCGCTCGCGCCGCGCCGCCCGCGTGCCGTCGCG
CAGCGCCCGGCGCGCCGCACGCGCGGCGTGCTCGCCAACTTCAACAACCCGTACCAGCACGTCGATCTCGACGCCGCGCT
GCCCGCGCACCATCCGCTGTTCGGCGCGTTCGACGCGCCGCTCACGCCGCGCGCGCGGCACGGCCTGCGGCTCACGCGCG
AACTCGCGCGGCCGATCGGGGCCACCGCGCTCGCGCGCCTGACGCTCGACAACCACGTGCCGATGAGCGACCTGCTGCTC
GACGACCTGCTCGCGCTCGGTGCGGCCTGTCGCGAGCCGGTGGCCGCGCGCGACGGCACACGGGTCGATCTCGCGCCCGC
GCTCGCGATCCTGCGCGCGTGGCGTCGCGAGGACGCGCTCGACGCGCCGGGCGCGCCGCTGTTTCGCGAATTCGCGCAGG
CGTGGCTCGCGGGCGCGCATGGCTACGCGCACGCCTTCGATCCCGCCGCGCCACTCGACACGCCGCGCGGCCTGCCGCAC
TGGCAGGGCAGCGGCCCGGCGCCGGCGCTCGTCGCGCTAGCCACGGCCGTCGAGCAGCTCGCGGCGGCTGGCTTTCCGCC
CAGCGCCACGCTGCGCGACCTCCAGTTCCGGCTGCGCGCCGACGGCACGCGCGCACCGTTGGACGGCGGCCCGAACCTGA
CCGGCGCGCTCAACGTCAGCCAGGTCGGCGCACTCACACCGCCCGAGCGGCTCGCCCAGCTCGTGCGCGGGCGCGTGCCG
CTGCCCACCGGCCTCGCGCCGCACGGCTATGCCGTGAACTTCGGCACCACCTGGCTCGCCAGCATCGTGTTCGACGGTGG
CCGCCCGCTCGTGCATAGCGTGCTGCCGCAGGCGCAGCGCAGCCGGCCCGGCACCGCGTGGAGCGACGGCCGGCCGCCGC
CGCCGCTCGGCACGCCGGCCAGCCACTTCGCGTTCGAGGCTGCGCAGGTGCAGGCCGCCACGGTCACGCGATGCGAATTA
CGCGCAAGTGCCGCATCGGTTACCTTCGCCGCCAGCGCGGCCGACGCCTCCCGTCATACCCCGCTCGCCCACCCCGTCCG
CCCTCGCCCATGA

Upstream 100 bases:

>100_bases
ACGCGATCGCGCAGGAACGCGTGGACGCGTTCGTCGCCAACCACAGCGCGCACGCGCTGAAGCTAGCCTGACGCCGCCGC
CCATGCCGTCGATCCCGTCC

Downstream 100 bases:

>100_bases
ACGATTTCTTCTCGATGTACCGCCACGGCTTCCTGCGGGTGGCCGTCGCCATTCCCCCCGTGGTGGTCGCCGATCCGGCC
GCCAACCTCCAGGCGACGCT

Product: Aculeacin A acylase

Products: NA

Alternate protein names: AHL acylase pvdQ; Acyl-HSL acylase pvdQ; Acyl-HSL acylase pvdQ subunit alpha; Acyl-HSL acylase pvdQ subunit beta [H]

Number of amino acids: Translated: 830; Mature: 829

Protein sequence:

>830_residues
MPPSHAAPPPAHLPEHPSFAAVPAYAPVEIVVEIARSADGTPHIRAHDFESLGYGHGYVVADDHAAVLLAHLVTLLGERS
RHYGRDEAPGDDANLDSDLGYRALDYGGQAAGALARMSRHANALIDGFAAGFNRRVSELVEAGEPFASMPGGTPRVLQRN
DVAALLLALADEASGRRFVQALALARPPVPTAAPDAHGEVAAGADHAARADDARRADPPWSAHADLPLGSNAWAIGGEAA
AGGASVLIANPHFSFNDGLRLYQVHLTIPGAFDVAGVSILGCPTVNLGFNASLAWTHTVSSAERFVLQRLQLVPNDPTAY
FWDGRPEPMQRRRVAIEIRGEARPHERDLWQTRHGPPLSVPGLAEWNPEWVFCLGNANAGNADVLDHWLAIGAARSLDEL
EQSFARWAGTSWVNLLAIDAAGQACYVDGSNVPELGAATLAALADTDHPLALERRRRGLVVLPGDDPRHALAPRRPRAVA
QRPARRTRGVLANFNNPYQHVDLDAALPAHHPLFGAFDAPLTPRARHGLRLTRELARPIGATALARLTLDNHVPMSDLLL
DDLLALGAACREPVAARDGTRVDLAPALAILRAWRREDALDAPGAPLFREFAQAWLAGAHGYAHAFDPAAPLDTPRGLPH
WQGSGPAPALVALATAVEQLAAAGFPPSATLRDLQFRLRADGTRAPLDGGPNLTGALNVSQVGALTPPERLAQLVRGRVP
LPTGLAPHGYAVNFGTTWLASIVFDGGRPLVHSVLPQAQRSRPGTAWSDGRPPPPLGTPASHFAFEAAQVQAATVTRCEL
RASAASVTFAASAADASRHTPLAHPVRPRP

Sequences:

>Translated_830_residues
MPPSHAAPPPAHLPEHPSFAAVPAYAPVEIVVEIARSADGTPHIRAHDFESLGYGHGYVVADDHAAVLLAHLVTLLGERS
RHYGRDEAPGDDANLDSDLGYRALDYGGQAAGALARMSRHANALIDGFAAGFNRRVSELVEAGEPFASMPGGTPRVLQRN
DVAALLLALADEASGRRFVQALALARPPVPTAAPDAHGEVAAGADHAARADDARRADPPWSAHADLPLGSNAWAIGGEAA
AGGASVLIANPHFSFNDGLRLYQVHLTIPGAFDVAGVSILGCPTVNLGFNASLAWTHTVSSAERFVLQRLQLVPNDPTAY
FWDGRPEPMQRRRVAIEIRGEARPHERDLWQTRHGPPLSVPGLAEWNPEWVFCLGNANAGNADVLDHWLAIGAARSLDEL
EQSFARWAGTSWVNLLAIDAAGQACYVDGSNVPELGAATLAALADTDHPLALERRRRGLVVLPGDDPRHALAPRRPRAVA
QRPARRTRGVLANFNNPYQHVDLDAALPAHHPLFGAFDAPLTPRARHGLRLTRELARPIGATALARLTLDNHVPMSDLLL
DDLLALGAACREPVAARDGTRVDLAPALAILRAWRREDALDAPGAPLFREFAQAWLAGAHGYAHAFDPAAPLDTPRGLPH
WQGSGPAPALVALATAVEQLAAAGFPPSATLRDLQFRLRADGTRAPLDGGPNLTGALNVSQVGALTPPERLAQLVRGRVP
LPTGLAPHGYAVNFGTTWLASIVFDGGRPLVHSVLPQAQRSRPGTAWSDGRPPPPLGTPASHFAFEAAQVQAATVTRCEL
RASAASVTFAASAADASRHTPLAHPVRPRP
>Mature_829_residues
PPSHAAPPPAHLPEHPSFAAVPAYAPVEIVVEIARSADGTPHIRAHDFESLGYGHGYVVADDHAAVLLAHLVTLLGERSR
HYGRDEAPGDDANLDSDLGYRALDYGGQAAGALARMSRHANALIDGFAAGFNRRVSELVEAGEPFASMPGGTPRVLQRND
VAALLLALADEASGRRFVQALALARPPVPTAAPDAHGEVAAGADHAARADDARRADPPWSAHADLPLGSNAWAIGGEAAA
GGASVLIANPHFSFNDGLRLYQVHLTIPGAFDVAGVSILGCPTVNLGFNASLAWTHTVSSAERFVLQRLQLVPNDPTAYF
WDGRPEPMQRRRVAIEIRGEARPHERDLWQTRHGPPLSVPGLAEWNPEWVFCLGNANAGNADVLDHWLAIGAARSLDELE
QSFARWAGTSWVNLLAIDAAGQACYVDGSNVPELGAATLAALADTDHPLALERRRRGLVVLPGDDPRHALAPRRPRAVAQ
RPARRTRGVLANFNNPYQHVDLDAALPAHHPLFGAFDAPLTPRARHGLRLTRELARPIGATALARLTLDNHVPMSDLLLD
DLLALGAACREPVAARDGTRVDLAPALAILRAWRREDALDAPGAPLFREFAQAWLAGAHGYAHAFDPAAPLDTPRGLPHW
QGSGPAPALVALATAVEQLAAAGFPPSATLRDLQFRLRADGTRAPLDGGPNLTGALNVSQVGALTPPERLAQLVRGRVPL
PTGLAPHGYAVNFGTTWLASIVFDGGRPLVHSVLPQAQRSRPGTAWSDGRPPPPLGTPASHFAFEAAQVQAATVTRCELR
ASAASVTFAASAADASRHTPLAHPVRPRP

Specific function: Catalyzes the deacylation of acyl-homoserine lactone (AHL or acyl-HSL), releasing homoserine lactone (HSL) and the corresponding fatty acid. Possesses a specificity for the degradation of long-chain acyl-HSLs (side chains of 11 to 14 carbons in length) [H

COG id: COG2366

COG function: function code R; Protein related to penicillin acylase

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S45 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002692 [H]

Pfam domain/function: PF01804 Penicil_amidase [H]

EC number: =3.5.1.97 [H]

Molecular weight: Translated: 87901; Mature: 87770

Theoretical pI: Translated: 6.88; Mature: 6.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPPSHAAPPPAHLPEHPSFAAVPAYAPVEIVVEIARSADGTPHIRAHDFESLGYGHGYVV
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEECCHHHCCCCCCEEE
ADDHAAVLLAHLVTLLGERSRHYGRDEAPGDDANLDSDLGYRALDYGGQAAGALARMSRH
ECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHH
ANALIDGFAAGFNRRVSELVEAGEPFASMPGGTPRVLQRNDVAALLLALADEASGRRFVQ
HHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCHHHEECCHHHHHHHHHHCCCCHHHHHH
ALALARPPVPTAAPDAHGEVAAGADHAARADDARRADPPWSAHADLPLGSNAWAIGGEAA
HHHHCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCC
AGGASVLIANPHFSFNDGLRLYQVHLTIPGAFDVAGVSILGCPTVNLGFNASLAWTHTVS
CCCCEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCEEEECCCCCCCCCCCEEEEEHHHH
SAERFVLQRLQLVPNDPTAYFWDGRPEPMQRRRVAIEIRGEARPHERDLWQTRHGPPLSV
HHHHHHHHHHHHCCCCCCEEEECCCCCHHHCCEEEEEEECCCCCCHHHHHHCCCCCCCCC
PGLAEWNPEWVFCLGNANAGNADVLDHWLAIGAARSLDELEQSFARWAGTSWVNLLAIDA
CCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEC
AGQACYVDGSNVPELGAATLAALADTDHPLALERRRRGLVVLPGDDPRHALAPRRPRAVA
CCCEEEECCCCCCCHHHHHHHHHHCCCCCHHHHHHHCCEEEECCCCCCCCCCCCCCHHHH
QRPARRTRGVLANFNNPYQHVDLDAALPAHHPLFGAFDAPLTPRARHGLRLTRELARPIG
HCHHHHHCCHHCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHC
ATALARLTLDNHVPMSDLLLDDLLALGAACREPVAARDGTRVDLAPALAILRAWRREDAL
HHHHHEEHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHHCCCC
DAPGAPLFREFAQAWLAGAHGYAHAFDPAAPLDTPRGLPHWQGSGPAPALVALATAVEQL
CCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
AAAGFPPSATLRDLQFRLRADGTRAPLDGGPNLTGALNVSQVGALTPPERLAQLVRGRVP
HHCCCCCCCHHHHHHHHEECCCCCCCCCCCCCCEEEECHHHCCCCCCHHHHHHHHHCCCC
LPTGLAPHGYAVNFGTTWLASIVFDGGRPLVHSVLPQAQRSRPGTAWSDGRPPPPLGTPA
CCCCCCCCCEEEECHHHHHHHHHHCCCCHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCH
SHFAFEAAQVQAATVTRCELRASAASVTFAASAADASRHTPLAHPVRPRP
HHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PPSHAAPPPAHLPEHPSFAAVPAYAPVEIVVEIARSADGTPHIRAHDFESLGYGHGYVV
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEECCHHHCCCCCCEEE
ADDHAAVLLAHLVTLLGERSRHYGRDEAPGDDANLDSDLGYRALDYGGQAAGALARMSRH
ECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHH
ANALIDGFAAGFNRRVSELVEAGEPFASMPGGTPRVLQRNDVAALLLALADEASGRRFVQ
HHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCHHHEECCHHHHHHHHHHCCCCHHHHHH
ALALARPPVPTAAPDAHGEVAAGADHAARADDARRADPPWSAHADLPLGSNAWAIGGEAA
HHHHCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCC
AGGASVLIANPHFSFNDGLRLYQVHLTIPGAFDVAGVSILGCPTVNLGFNASLAWTHTVS
CCCCEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCEEEECCCCCCCCCCCEEEEEHHHH
SAERFVLQRLQLVPNDPTAYFWDGRPEPMQRRRVAIEIRGEARPHERDLWQTRHGPPLSV
HHHHHHHHHHHHCCCCCCEEEECCCCCHHHCCEEEEEEECCCCCCHHHHHHCCCCCCCCC
PGLAEWNPEWVFCLGNANAGNADVLDHWLAIGAARSLDELEQSFARWAGTSWVNLLAIDA
CCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEC
AGQACYVDGSNVPELGAATLAALADTDHPLALERRRRGLVVLPGDDPRHALAPRRPRAVA
CCCEEEECCCCCCCHHHHHHHHHHCCCCCHHHHHHHCCEEEECCCCCCCCCCCCCCHHHH
QRPARRTRGVLANFNNPYQHVDLDAALPAHHPLFGAFDAPLTPRARHGLRLTRELARPIG
HCHHHHHCCHHCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHC
ATALARLTLDNHVPMSDLLLDDLLALGAACREPVAARDGTRVDLAPALAILRAWRREDAL
HHHHHEEHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHHCCCC
DAPGAPLFREFAQAWLAGAHGYAHAFDPAAPLDTPRGLPHWQGSGPAPALVALATAVEQL
CCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
AAAGFPPSATLRDLQFRLRADGTRAPLDGGPNLTGALNVSQVGALTPPERLAQLVRGRVP
HHCCCCCCCHHHHHHHHEECCCCCCCCCCCCCCEEEECHHHCCCCCCHHHHHHHHHCCCC
LPTGLAPHGYAVNFGTTWLASIVFDGGRPLVHSVLPQAQRSRPGTAWSDGRPPPPLGTPA
CCCCCCCCCEEEECHHHHHHHHHHCCCCHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCH
SHFAFEAAQVQAATVTRCELRASAASVTFAASAADASRHTPLAHPVRPRP
HHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA