Definition Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence.
Accession NC_012721
Length 2,827,333

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The map label for this gene is plcN [H]

Identifier: 238024639

GI number: 238024639

Start: 1607698

End: 1609425

Strand: Direct

Name: plcN [H]

Synonym: bglu_2g12540

Alternate gene names: 238024639

Gene position: 1607698-1609425 (Clockwise)

Preceding gene: 238024634

Following gene: 238024640

Centisome position: 56.86

GC content: 66.38

Gene sequence:

>1728_bases
ATGCTGCTTCGTCGAACCTTGATTGCCACTGCCTGCGTCGCGTCTGCGATCACGCTGTACGCCTGCGGCGGCAATGATGA
TAGTTCCGCGTCCAACTCGACCACGCCTTCGTCCTCGCCGAGCTCGACGGTCTCGGCTCAGGACGCTCTGCAGACCAAGA
CGCCGATCAAGCATCTGGTCGTGATCTACGGCGAGAACGTCTCGTTCGACCACTATTTCGGTACGTATCCCAACGCCGCC
AATCTGGCCGGCGAACCGGCCTTCACGCCGGCCGCGAACACGCAGACCGACATCGACAACCTCGGCCCGGCCACCAGCGC
GCTGCGCACCGCGAACGGCAACCAGACGAACCCGGCCAACGGCTCGGACGCCTCGGGCCCGTTCCGCCTGGACCGCACGC
AGGCCGCATCGGCCGATCAGAACCACGCCTACACTGCCGAACAGCAGGCCTACGACAACGGCGCGGCCGACCTGTTCCCG
CTCTACACCGGCAGGGCCACGCCGGGCGGCGTGGGCGGCTTCGGCACGAAGGGCCAGGTGATGGGCTATTACGACGGCAA
CACCGTCACGGCCCTGTGGAACTACGCATCGCATTACGCGATGAGCGACAACGCGTTCTCCGACACCTATGGCCCGTCGA
CGCCGGGCGCGCTCGAGCTGGTGTCGGGCAACACCAACGGCATGCAGATCGTGAAGACCTCGAAGGCCTCCTCGACCAAG
CTGGCCACCTCGTACTACGTCAACGACGGCCAGAGCGGCTACACGATGATCAACGACGTGGACCCGGGCTATGACGTCTG
CTCGAGCACGACGGACCAGGCGATGATGCAGGGCAAGAACATCGGCGACCTGCTGAACGCGCAGAAGATCACCTGGGGCG
GCTTCATGGGCGGCTTCAACCTGTCGACCAAGAATGCCGACGGCTCGACGGGCTGCGCGCGCAAGACGATGGCCACGGCC
GTCGGCGCCGCGACCAACGACTACATCCCCCACCACAACTGGTTCCAGTACTTCGCTTCGACGGCGAACCCGAACCACAC
GCGTCCGAGCTCGATCGCGGCGATCGGCTCGAGCCTGGAAACCGACGGCAAGACGGCCGAGCCGGCCAACCACCAGTACG
ATTCGGACGACTTCTTCGCGGCGGTCCAGGCCGGCAACTTCCCGTCGGTATCGTTCCTGAAGGCCCCGGCCGCCCAGGAC
GCGCACGCCGGCTACTCGGACCCGCTCGACGAGCAGCTGTTCGTCACGAAGGTCGTGAACTTCCTGATGCAGCAGCCGGA
CTGGAAGAACACCGCCGTGGTCGTCACCTATGACGACTCGGACGGCTGGTACGACCACAAGTACGTCACGCCGACGCACG
CTTCGTTCGACGCGGTCGATCAGCTGAACGGCGACGGCGTCTGCGGCACGGGCTCGGCCTCGGTGCCGCTCGGCGTCACG
GGCAAGCCGGTGAACGGCCGCTGCGGTCCGGGCACGCGCATTCCGTTCCTGCTGATCTCGCCGTGGGCCAAGACGAACTA
CGTCAGCCACGTGCCGATCACGCAGGCGTCGGTGGCGCGCTTCATCGAAGACAACTGGCTCGGCGGCACGCGCCTGGGCG
GCGGTTCGTTCGATGCGACGGCCGGCGACATGAGCGACCTGCTGAACCTGACCGGCTCGGCCAACACGACGGCGCTGTTC
CTCGATCCGTCGGTGGGTACGCCGCTGAGCGCGGCACCGGCCAACTGA

Upstream 100 bases:

>100_bases
GGTATCCCGCTTCGAAGGCCCCGCCCGCTACCAAAAATGGTCCGCGCCGTCCCGCACGGGGAATGAAACAACAGACGGCC
TTCCAATGGAGTCTCACACA

Downstream 100 bases:

>100_bases
TCCGCCACGATGTAACGAAACCGGCCGGCGCGCGAGCGCCGGCCTTTTGCCTGTGCGGCCGCCGTCTCGGGCGGCCACCC
CGACTCGACCACACCAGCAT

Product: phosphoesterase family protein

Products: NA

Alternate protein names: PLC-N; Phosphatidylcholine cholinephosphohydrolase; Phosphatidylcholine-hydrolyzing phospholipase C; PC-PLC [H]

Number of amino acids: Translated: 575; Mature: 575

Protein sequence:

>575_residues
MLLRRTLIATACVASAITLYACGGNDDSSASNSTTPSSSPSSTVSAQDALQTKTPIKHLVVIYGENVSFDHYFGTYPNAA
NLAGEPAFTPAANTQTDIDNLGPATSALRTANGNQTNPANGSDASGPFRLDRTQAASADQNHAYTAEQQAYDNGAADLFP
LYTGRATPGGVGGFGTKGQVMGYYDGNTVTALWNYASHYAMSDNAFSDTYGPSTPGALELVSGNTNGMQIVKTSKASSTK
LATSYYVNDGQSGYTMINDVDPGYDVCSSTTDQAMMQGKNIGDLLNAQKITWGGFMGGFNLSTKNADGSTGCARKTMATA
VGAATNDYIPHHNWFQYFASTANPNHTRPSSIAAIGSSLETDGKTAEPANHQYDSDDFFAAVQAGNFPSVSFLKAPAAQD
AHAGYSDPLDEQLFVTKVVNFLMQQPDWKNTAVVVTYDDSDGWYDHKYVTPTHASFDAVDQLNGDGVCGTGSASVPLGVT
GKPVNGRCGPGTRIPFLLISPWAKTNYVSHVPITQASVARFIEDNWLGGTRLGGGSFDATAGDMSDLLNLTGSANTTALF
LDPSVGTPLSAAPAN

Sequences:

>Translated_575_residues
MLLRRTLIATACVASAITLYACGGNDDSSASNSTTPSSSPSSTVSAQDALQTKTPIKHLVVIYGENVSFDHYFGTYPNAA
NLAGEPAFTPAANTQTDIDNLGPATSALRTANGNQTNPANGSDASGPFRLDRTQAASADQNHAYTAEQQAYDNGAADLFP
LYTGRATPGGVGGFGTKGQVMGYYDGNTVTALWNYASHYAMSDNAFSDTYGPSTPGALELVSGNTNGMQIVKTSKASSTK
LATSYYVNDGQSGYTMINDVDPGYDVCSSTTDQAMMQGKNIGDLLNAQKITWGGFMGGFNLSTKNADGSTGCARKTMATA
VGAATNDYIPHHNWFQYFASTANPNHTRPSSIAAIGSSLETDGKTAEPANHQYDSDDFFAAVQAGNFPSVSFLKAPAAQD
AHAGYSDPLDEQLFVTKVVNFLMQQPDWKNTAVVVTYDDSDGWYDHKYVTPTHASFDAVDQLNGDGVCGTGSASVPLGVT
GKPVNGRCGPGTRIPFLLISPWAKTNYVSHVPITQASVARFIEDNWLGGTRLGGGSFDATAGDMSDLLNLTGSANTTALF
LDPSVGTPLSAAPAN
>Mature_575_residues
MLLRRTLIATACVASAITLYACGGNDDSSASNSTTPSSSPSSTVSAQDALQTKTPIKHLVVIYGENVSFDHYFGTYPNAA
NLAGEPAFTPAANTQTDIDNLGPATSALRTANGNQTNPANGSDASGPFRLDRTQAASADQNHAYTAEQQAYDNGAADLFP
LYTGRATPGGVGGFGTKGQVMGYYDGNTVTALWNYASHYAMSDNAFSDTYGPSTPGALELVSGNTNGMQIVKTSKASSTK
LATSYYVNDGQSGYTMINDVDPGYDVCSSTTDQAMMQGKNIGDLLNAQKITWGGFMGGFNLSTKNADGSTGCARKTMATA
VGAATNDYIPHHNWFQYFASTANPNHTRPSSIAAIGSSLETDGKTAEPANHQYDSDDFFAAVQAGNFPSVSFLKAPAAQD
AHAGYSDPLDEQLFVTKVVNFLMQQPDWKNTAVVVTYDDSDGWYDHKYVTPTHASFDAVDQLNGDGVCGTGSASVPLGVT
GKPVNGRCGPGTRIPFLLISPWAKTNYVSHVPITQASVARFIEDNWLGGTRLGGGSFDATAGDMSDLLNLTGSANTTALF
LDPSVGTPLSAAPAN

Specific function: Hydrolyzes phosphatidylserine as well as phosphatidylcholine [H]

COG id: COG3511

COG function: function code M; Phospholipase C

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial phospholipase C family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007312
- InterPro:   IPR008475
- InterPro:   IPR017767
- InterPro:   IPR006311 [H]

Pfam domain/function: PF05506 DUF756; PF04185 Phosphoesterase [H]

EC number: =3.1.4.3 [H]

Molecular weight: Translated: 60167; Mature: 60167

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLRRTLIATACVASAITLYACGGNDDSSASNSTTPSSSPSSTVSAQDALQTKTPIKHLV
CCHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEE
VIYGENVSFDHYFGTYPNAANLAGEPAFTPAANTQTDIDNLGPATSALRTANGNQTNPAN
EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHCCCCCCCCCCCC
GSDASGPFRLDRTQAASADQNHAYTAEQQAYDNGAADLFPLYTGRATPGGVGGFGTKGQV
CCCCCCCEEECCHHHCCCCCCCCCCCHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCE
MGYYDGNTVTALWNYASHYAMSDNAFSDTYGPSTPGALELVSGNTNGMQIVKTSKASSTK
EEEECCCEEEEEEHHHHHEEECCCCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCE
LATSYYVNDGQSGYTMINDVDPGYDVCSSTTDQAMMQGKNIGDLLNAQKITWGGFMGGFN
EEEEEEEECCCCCCEEEECCCCCHHHHCCCHHHHHHCCCCHHHHHCCCEEEECCEECCCC
LSTKNADGSTGCARKTMATAVGAATNDYIPHHNWFQYFASTANPNHTRPSSIAAIGSSLE
CCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHCCCCC
TDGKTAEPANHQYDSDDFFAAVQAGNFPSVSFLKAPAAQDAHAGYSDPLDEQLFVTKVVN
CCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHH
FLMQQPDWKNTAVVVTYDDSDGWYDHKYVTPTHASFDAVDQLNGDGVCGTGSASVPLGVT
HHHCCCCCCCCEEEEEEECCCCCCCCEEECCCCCCHHHHHHCCCCCEECCCCCCCCCCCC
GKPVNGRCGPGTRIPFLLISPWAKTNYVSHVPITQASVARFIEDNWLGGTRLGGGSFDAT
CCCCCCCCCCCCCCCEEEECCCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCC
AGDMSDLLNLTGSANTTALFLDPSVGTPLSAAPAN
CHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCC
>Mature Secondary Structure
MLLRRTLIATACVASAITLYACGGNDDSSASNSTTPSSSPSSTVSAQDALQTKTPIKHLV
CCHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEE
VIYGENVSFDHYFGTYPNAANLAGEPAFTPAANTQTDIDNLGPATSALRTANGNQTNPAN
EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHCCCCCCCCCCCC
GSDASGPFRLDRTQAASADQNHAYTAEQQAYDNGAADLFPLYTGRATPGGVGGFGTKGQV
CCCCCCCEEECCHHHCCCCCCCCCCCHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCE
MGYYDGNTVTALWNYASHYAMSDNAFSDTYGPSTPGALELVSGNTNGMQIVKTSKASSTK
EEEECCCEEEEEEHHHHHEEECCCCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCE
LATSYYVNDGQSGYTMINDVDPGYDVCSSTTDQAMMQGKNIGDLLNAQKITWGGFMGGFN
EEEEEEEECCCCCCEEEECCCCCHHHHCCCHHHHHHCCCCHHHHHCCCEEEECCEECCCC
LSTKNADGSTGCARKTMATAVGAATNDYIPHHNWFQYFASTANPNHTRPSSIAAIGSSLE
CCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHCCCCC
TDGKTAEPANHQYDSDDFFAAVQAGNFPSVSFLKAPAAQDAHAGYSDPLDEQLFVTKVVN
CCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHH
FLMQQPDWKNTAVVVTYDDSDGWYDHKYVTPTHASFDAVDQLNGDGVCGTGSASVPLGVT
HHHCCCCCCCCEEEEEEECCCCCCCCEEECCCCCCHHHHHHCCCCCEECCCCCCCCCCCC
GKPVNGRCGPGTRIPFLLISPWAKTNYVSHVPITQASVARFIEDNWLGGTRLGGGSFDAT
CCCCCCCCCCCCCCCEEEECCCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCC
AGDMSDLLNLTGSANTTALFLDPSVGTPLSAAPAN
CHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2120196; 10984043 [H]