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The map label for this gene is dedA [C]

Identifier: 238024632

GI number: 238024632

Start: 1598514

End: 1599536

Strand: Reverse

Name: dedA [C]

Synonym: bglu_2g12470

Alternate gene names: 238024632

Gene position: 1599536-1598514 (Counterclockwise)

Preceding gene: 238024635

Following gene: 238024631

Centisome position: 56.57

GC content: 68.91

Gene sequence:

>1023_bases
GTGTGGCACTTTCCCGTTGCAATCCCTTCGTCGCTCGGCCCGTGGGCCGTCTTTCTCAGCGTGCTGGTCACGCAGCTCGG
CCTGCCCGTGCCCGCCGCGCCGATGCTGATCCTGGGCGGCACGATGGCGGCGATGGGGCAGGCCTCGTACACCAGCATGT
TCGTCGCGGCGATCAGCGCGACGCTGCTCGCCGATTCGCTCTGGTTCAGCGCCGGGCGCCTGCGCGGGCGCCGGCTGCTC
AACGGGCTGGTGCGCTATTCGCTGTCGCTCGACACCACGCTGCGCATCGCGCGCAACGTGTTCGAGCGCTACGGCGCGCC
GATCCTGATCGTTGCGAAGTTCGTGCCGGGCCTCGGCCTGATGTCGGCGCCGCTGCTCGGCACCACCTCGATCGCGGTTC
CCGTGTTCCTGCTCTGGGATGTCGCCGGCGCGTCGCTGTGGGCCAGCGCCTGGCTGCTCGGCGGCGCCGCGCTCGACCAT
GAGATCGTGCGCATCGTGCTGTGGGTGCGCAGCAGCGGCGGCACGATCTTCGACGCGTTCGCGGCGATCTTCGTCACCTT
CCTGCTCTATCGCTGGCTACGGCGCATCCAGTTCCGCCGCTGGCTCGCCAAGGTGCGCATCGAGCCGGCCCAGCTCGACG
CGATGATGAAATCGGCCGAACCGCCGCTGATCTTCGATGCGCGGCCGCGCGCGATCCGCCAGCAGGACGCGTACCGGATC
GCCGGCGCCTATCCGCTCGATCTCGACTCGTCCGAGCAACTCGATCCGGCGCTGCTGAACCGGCCGCTCGTGGTGTACTG
CGTGTGCCCGAACGAGGCGACGGCCAAGCGGATCATCCAGCAGTTGCAGCGCAAGAACATCCACCACGTGCGGGCGCTGA
AGGGCGGGCTCGATGCCTGGGAGAAGCACGGCTATCCGGTCGAGCCGCTGCCGGCCGATTTCGACGCGTCGCGGTACACG
GTGAAGCCGGAGCGCGAGATGGACGGGGAATACACGGTGCGGGCGCGCTTGTCCGATACGTGA

Upstream 100 bases:

>100_bases
GGCCATCCCGGTCGTGCGGTCGGGCGTCGCAGCCGGCACGCCGCCGCCGGGCGGCTTAGACCTGCGCAGCCCGGCTCGGT
CGTGATCCAGGAGCGGCGCC

Downstream 100 bases:

>100_bases
CGACGGGTTGCGGCGGGCTCCGGCCCGGCCGTGCCAGCCGGTGTCCGCGGCGGGCCGGCGCGGGCCGCCGTCGCGCCGGT
CTGCGCCCCGGCGTCGTCCC

Product: DedA family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 340; Mature: 340

Protein sequence:

>340_residues
MWHFPVAIPSSLGPWAVFLSVLVTQLGLPVPAAPMLILGGTMAAMGQASYTSMFVAAISATLLADSLWFSAGRLRGRRLL
NGLVRYSLSLDTTLRIARNVFERYGAPILIVAKFVPGLGLMSAPLLGTTSIAVPVFLLWDVAGASLWASAWLLGGAALDH
EIVRIVLWVRSSGGTIFDAFAAIFVTFLLYRWLRRIQFRRWLAKVRIEPAQLDAMMKSAEPPLIFDARPRAIRQQDAYRI
AGAYPLDLDSSEQLDPALLNRPLVVYCVCPNEATAKRIIQQLQRKNIHHVRALKGGLDAWEKHGYPVEPLPADFDASRYT
VKPEREMDGEYTVRARLSDT

Sequences:

>Translated_340_residues
MWHFPVAIPSSLGPWAVFLSVLVTQLGLPVPAAPMLILGGTMAAMGQASYTSMFVAAISATLLADSLWFSAGRLRGRRLL
NGLVRYSLSLDTTLRIARNVFERYGAPILIVAKFVPGLGLMSAPLLGTTSIAVPVFLLWDVAGASLWASAWLLGGAALDH
EIVRIVLWVRSSGGTIFDAFAAIFVTFLLYRWLRRIQFRRWLAKVRIEPAQLDAMMKSAEPPLIFDARPRAIRQQDAYRI
AGAYPLDLDSSEQLDPALLNRPLVVYCVCPNEATAKRIIQQLQRKNIHHVRALKGGLDAWEKHGYPVEPLPADFDASRYT
VKPEREMDGEYTVRARLSDT
>Mature_340_residues
MWHFPVAIPSSLGPWAVFLSVLVTQLGLPVPAAPMLILGGTMAAMGQASYTSMFVAAISATLLADSLWFSAGRLRGRRLL
NGLVRYSLSLDTTLRIARNVFERYGAPILIVAKFVPGLGLMSAPLLGTTSIAVPVFLLWDVAGASLWASAWLLGGAALDH
EIVRIVLWVRSSGGTIFDAFAAIFVTFLLYRWLRRIQFRRWLAKVRIEPAQLDAMMKSAEPPLIFDARPRAIRQQDAYRI
AGAYPLDLDSSEQLDPALLNRPLVVYCVCPNEATAKRIIQQLQRKNIHHVRALKGGLDAWEKHGYPVEPLPADFDASRYT
VKPEREMDGEYTVRARLSDT

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 37684; Mature: 37684

Theoretical pI: Translated: 10.06; Mature: 10.06

Prosite motif: PS50206 RHODANESE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWHFPVAIPSSLGPWAVFLSVLVTQLGLPVPAAPMLILGGTMAAMGQASYTSMFVAAISA
CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHCCCHHHHHCCHHHHHHHHHHHHH
TLLADSLWFSAGRLRGRRLLNGLVRYSLSLDTTLRIARNVFERYGAPILIVAKFVPGLGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCEEEEEHHCCCCCH
MSAPLLGTTSIAVPVFLLWDVAGASLWASAWLLGGAALDHEIVRIVLWVRSSGGTIFDAF
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHEEECCCCHHHHHH
AAIFVTFLLYRWLRRIQFRRWLAKVRIEPAQLDAMMKSAEPPLIFDARPRAIRQQDAYRI
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEECCCCHHHHHCCCEEE
AGAYPLDLDSSEQLDPALLNRPLVVYCVCPNEATAKRIIQQLQRKNIHHVRALKGGLDAW
CCCCCCCCCCCCCCCHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCHHHHHHHHCCHHHH
EKHGYPVEPLPADFDASRYTVKPEREMDGEYTVRARLSDT
HHCCCCCCCCCCCCCCCCEEECCHHHCCCCEEEEEEECCC
>Mature Secondary Structure
MWHFPVAIPSSLGPWAVFLSVLVTQLGLPVPAAPMLILGGTMAAMGQASYTSMFVAAISA
CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHCCCHHHHHCCHHHHHHHHHHHHH
TLLADSLWFSAGRLRGRRLLNGLVRYSLSLDTTLRIARNVFERYGAPILIVAKFVPGLGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCEEEEEHHCCCCCH
MSAPLLGTTSIAVPVFLLWDVAGASLWASAWLLGGAALDHEIVRIVLWVRSSGGTIFDAF
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHEEECCCCHHHHHH
AAIFVTFLLYRWLRRIQFRRWLAKVRIEPAQLDAMMKSAEPPLIFDARPRAIRQQDAYRI
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEECCCCHHHHHCCCEEE
AGAYPLDLDSSEQLDPALLNRPLVVYCVCPNEATAKRIIQQLQRKNIHHVRALKGGLDAW
CCCCCCCCCCCCCCCHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCHHHHHHHHCCHHHH
EKHGYPVEPLPADFDASRYTVKPEREMDGEYTVRARLSDT
HHCCCCCCCCCCCCCCCCEEECCHHHCCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]