Definition Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence.
Accession NC_012721
Length 2,827,333

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The map label for this gene is 238024584

Identifier: 238024584

GI number: 238024584

Start: 1529093

End: 1530802

Strand: Reverse

Name: 238024584

Synonym: bglu_2g11950

Alternate gene names: NA

Gene position: 1530802-1529093 (Counterclockwise)

Preceding gene: 238024586

Following gene: 238024583

Centisome position: 54.14

GC content: 75.96

Gene sequence:

>1710_bases
GTGCCGCCCGCCGTTCCCGCCCCCCACGCCTTCTATTACCTCGACAACTTCGAGCGCGCGCTCGCCTGGATCGCCGAGCG
TTACGACGATCTGCTCGACACGGCCGAGCAGGCCTTCCTGCGCGGGTTCGCCGGCCTGCCGCGCGCCTCGCGCGCGCTGC
TGGTGCGCATGCTGATGCGCAGCGGGCCGTGGTTCCGGCGCAGCAAGCTCGTCTACCACGAGATCGGCGACGCCGCCGCG
GCCGCCGCGCCGCTGGTGGCGCTCGGCTGGGTCGACGCGGCGCCGGCGCTGGCGCTCGACGCCGTATTCGCGCTGGCCAC
CCGCCCGGAGCTGGCGCGGCGCTTCGCGGCGCCGAAGGGCGCGCGCAAGGCCGACTGGCTCGACGCGCTGCGCGCCGAGG
CCGGGCCTGCGCTCGAACAGCCGTTCGAGGCCTGGCTGCCGGCCACCGGCGACAGCGTGTTCGAGGTCCGCATCGGCGCG
CTGTGCGACCGGCTGCGGCTGATGTTCTTCGGCAACCTGCATCAGGACTGGTCGGAGTTCGTGCTGGCCGAGCTGGGCGT
GCTCCAGGACGAGCGCGTGGCCTTCGAGCCGTCCTCGCGCGCGTTCCAGCAGCGTGCCGACCTGGACGCGTACCTGGCGC
TGTTCGCCTGCCGCGAGGCGCTGGCCGCCTGGCCCGGGGACGCGCCGCTCGACGCGCTGACGGCCGAGGTGGCCGCCGTG
GCCTGCGCGCAGGGCTGGCTGGAGACGCGCCGCGCCAAGCTGCTGCACGGCATCGGCACGGCCTGCGAGCGGCGCGCCGA
CTGGCCCGGCGCGCTCGCCGCCTATGCGGCGAGCGGCTGGCCCGGCAGCCGGCACCGCCGCATCCGCGTGCTGGAGCGCG
CCGGGCGCGACGCCGAGGCGCTCGCGCTGGCCGAGGCGGCCGCCGCGCAGCCGGAGAGCGAGGCGGAGCGTCAGCGCGTC
GCGCGCCTGCTGCCGCGCCTGCTCAGGCGCGCCGGCCGGCCCGTCAGGCGGGCCGCGGGCGCCGCGCCGGTGGCGCGCGA
GACGCTGGTGCTGGCGGCGCCGCGCGTGCCGGATTCGGTCGAGACGGCGGTGGCCCTGCACCTGTCGGGCGACGGCGCGA
TCGTCTACTACGTCGAGAACACGCTGATCAATTCGCTGTTCGGCCTGCTGTGCTGGGACGCCGTGTTCGCGGCCGTGCCC
GGCGCGTTCTTCCATCCGTTCCAGCGCGGCCCGGCCGACCTGCATGCGCCCGACTTCCGGGCGCGCCGCGCGGCGCGTTT
CGAGGCCTGCCTCGCGCAGCTCGATTCGGGGGCCTGGCGCGACACGGTGCTGCGCCGCTACGCGCAGAAGGCGGGCATCC
AGTCGCCGTTCGTGTTCTGGGGCGCGCTCGACGATGCGCTGCTCGCGCTGGCGCTCGACTGCATCGATCCCGCGCACCTG
CGGCGCTGCTTCGAGCGCCTGCTCGACGATCCGCGCGACAACCGCTCGGGGCTGCCGGACCTGATCCGCTTCTGGCCGGC
CGAGCGCCGCTACGAGCTGATCGAGGTGAAAGGGCCGGGCGACCGCCTGCAGGACAACCAGATCCGCTGGCTCGACTACT
GCGTCGGGCACGGCATGCCGGTGCGCGTGATCGACGTGGCGTGGGCGCCGCCGGCCGCGCAGGCCGGCACGCCGCGCGAG
GCGGCCGCGATGGCGGAGCCGGGCGCATGA

Upstream 100 bases:

>100_bases
GCCACGCCGGCAGCGGCAGCGGCGGGTTTCGCTTGCGGTCCCCCGCGCTCCATGCGCTATCATTCACCCCTGTACAAACG
TACAGGCTTCGACAATTCCC

Downstream 100 bases:

>100_bases
ACTACACCGTGGCGGTGCGCGCCATGTGCGAGTTCACCGCGAAGCGCGGCGACCTCGACCTGCGCTTCACGCCCGCGCCG
TCGGCGCAGGAGGGCATCGT

Product: VRR-NUC domain-containing protein

Products: NA

Alternate protein names: VRR-NUC Domain Protein; VRR-NUC Domain Family Protein; Vrr-Nuc Domain Protein; DNA Polymerase III Epsilon Subunit; Vrr-Nuc DomaiN-Containing Protein

Number of amino acids: Translated: 569; Mature: 568

Protein sequence:

>569_residues
MPPAVPAPHAFYYLDNFERALAWIAERYDDLLDTAEQAFLRGFAGLPRASRALLVRMLMRSGPWFRRSKLVYHEIGDAAA
AAAPLVALGWVDAAPALALDAVFALATRPELARRFAAPKGARKADWLDALRAEAGPALEQPFEAWLPATGDSVFEVRIGA
LCDRLRLMFFGNLHQDWSEFVLAELGVLQDERVAFEPSSRAFQQRADLDAYLALFACREALAAWPGDAPLDALTAEVAAV
ACAQGWLETRRAKLLHGIGTACERRADWPGALAAYAASGWPGSRHRRIRVLERAGRDAEALALAEAAAAQPESEAERQRV
ARLLPRLLRRAGRPVRRAAGAAPVARETLVLAAPRVPDSVETAVALHLSGDGAIVYYVENTLINSLFGLLCWDAVFAAVP
GAFFHPFQRGPADLHAPDFRARRAARFEACLAQLDSGAWRDTVLRRYAQKAGIQSPFVFWGALDDALLALALDCIDPAHL
RRCFERLLDDPRDNRSGLPDLIRFWPAERRYELIEVKGPGDRLQDNQIRWLDYCVGHGMPVRVIDVAWAPPAAQAGTPRE
AAAMAEPGA

Sequences:

>Translated_569_residues
MPPAVPAPHAFYYLDNFERALAWIAERYDDLLDTAEQAFLRGFAGLPRASRALLVRMLMRSGPWFRRSKLVYHEIGDAAA
AAAPLVALGWVDAAPALALDAVFALATRPELARRFAAPKGARKADWLDALRAEAGPALEQPFEAWLPATGDSVFEVRIGA
LCDRLRLMFFGNLHQDWSEFVLAELGVLQDERVAFEPSSRAFQQRADLDAYLALFACREALAAWPGDAPLDALTAEVAAV
ACAQGWLETRRAKLLHGIGTACERRADWPGALAAYAASGWPGSRHRRIRVLERAGRDAEALALAEAAAAQPESEAERQRV
ARLLPRLLRRAGRPVRRAAGAAPVARETLVLAAPRVPDSVETAVALHLSGDGAIVYYVENTLINSLFGLLCWDAVFAAVP
GAFFHPFQRGPADLHAPDFRARRAARFEACLAQLDSGAWRDTVLRRYAQKAGIQSPFVFWGALDDALLALALDCIDPAHL
RRCFERLLDDPRDNRSGLPDLIRFWPAERRYELIEVKGPGDRLQDNQIRWLDYCVGHGMPVRVIDVAWAPPAAQAGTPRE
AAAMAEPGA
>Mature_568_residues
PPAVPAPHAFYYLDNFERALAWIAERYDDLLDTAEQAFLRGFAGLPRASRALLVRMLMRSGPWFRRSKLVYHEIGDAAAA
AAPLVALGWVDAAPALALDAVFALATRPELARRFAAPKGARKADWLDALRAEAGPALEQPFEAWLPATGDSVFEVRIGAL
CDRLRLMFFGNLHQDWSEFVLAELGVLQDERVAFEPSSRAFQQRADLDAYLALFACREALAAWPGDAPLDALTAEVAAVA
CAQGWLETRRAKLLHGIGTACERRADWPGALAAYAASGWPGSRHRRIRVLERAGRDAEALALAEAAAAQPESEAERQRVA
RLLPRLLRRAGRPVRRAAGAAPVARETLVLAAPRVPDSVETAVALHLSGDGAIVYYVENTLINSLFGLLCWDAVFAAVPG
AFFHPFQRGPADLHAPDFRARRAARFEACLAQLDSGAWRDTVLRRYAQKAGIQSPFVFWGALDDALLALALDCIDPAHLR
RCFERLLDDPRDNRSGLPDLIRFWPAERRYELIEVKGPGDRLQDNQIRWLDYCVGHGMPVRVIDVAWAPPAAQAGTPREA
AAMAEPGA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI226246523, Length=182, Percent_Identity=30.2197802197802, Blast_Score=67, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 62429; Mature: 62298

Theoretical pI: Translated: 6.84; Mature: 6.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPPAVPAPHAFYYLDNFERALAWIAERYDDLLDTAEQAFLRGFAGLPRASRALLVRMLMR
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
SGPWFRRSKLVYHEIGDAAAAAAPLVALGWVDAAPALALDAVFALATRPELARRFAAPKG
CCCCHHHCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCC
ARKADWLDALRAEAGPALEQPFEAWLPATGDSVFEVRIGALCDRLRLMFFGNLHQDWSEF
CCHHHHHHHHHHHCCCCHHCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHH
VLAELGVLQDERVAFEPSSRAFQQRADLDAYLALFACREALAAWPGDAPLDALTAEVAAV
HHHHHCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
ACAQGWLETRRAKLLHGIGTACERRADWPGALAAYAASGWPGSRHRRIRVLERAGRDAEA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHH
LALAEAAAAQPESEAERQRVARLLPRLLRRAGRPVRRAAGAAPVARETLVLAAPRVPDSV
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHEEECCCCCCCC
ETAVALHLSGDGAIVYYVENTLINSLFGLLCWDAVFAAVPGAFFHPFQRGPADLHAPDFR
CCEEEEEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHCCCCCCCCCCHH
ARRAARFEACLAQLDSGAWRDTVLRRYAQKAGIQSPFVFWGALDDALLALALDCIDPAHL
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHCCHHHH
RRCFERLLDDPRDNRSGLPDLIRFWPAERRYELIEVKGPGDRLQDNQIRWLDYCVGHGMP
HHHHHHHHCCCCCCCCCCHHHHHHCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHCCCCC
VRVIDVAWAPPAAQAGTPREAAAMAEPGA
EEEEEEECCCCCCCCCCCHHHHCCCCCCC
>Mature Secondary Structure 
PPAVPAPHAFYYLDNFERALAWIAERYDDLLDTAEQAFLRGFAGLPRASRALLVRMLMR
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
SGPWFRRSKLVYHEIGDAAAAAAPLVALGWVDAAPALALDAVFALATRPELARRFAAPKG
CCCCHHHCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCC
ARKADWLDALRAEAGPALEQPFEAWLPATGDSVFEVRIGALCDRLRLMFFGNLHQDWSEF
CCHHHHHHHHHHHCCCCHHCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHH
VLAELGVLQDERVAFEPSSRAFQQRADLDAYLALFACREALAAWPGDAPLDALTAEVAAV
HHHHHCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
ACAQGWLETRRAKLLHGIGTACERRADWPGALAAYAASGWPGSRHRRIRVLERAGRDAEA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHH
LALAEAAAAQPESEAERQRVARLLPRLLRRAGRPVRRAAGAAPVARETLVLAAPRVPDSV
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHEEECCCCCCCC
ETAVALHLSGDGAIVYYVENTLINSLFGLLCWDAVFAAVPGAFFHPFQRGPADLHAPDFR
CCEEEEEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHCCCCCCCCCCHH
ARRAARFEACLAQLDSGAWRDTVLRRYAQKAGIQSPFVFWGALDDALLALALDCIDPAHL
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHCCHHHH
RRCFERLLDDPRDNRSGLPDLIRFWPAERRYELIEVKGPGDRLQDNQIRWLDYCVGHGMP
HHHHHHHHCCCCCCCCCCHHHHHHCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHCCCCC
VRVIDVAWAPPAAQAGTPREAAAMAEPGA
EEEEEEECCCCCCCCCCCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA