Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
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Accession | NC_012721 |
Length | 2,827,333 |
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The map label for this gene is celS [H]
Identifier: 238024573
GI number: 238024573
Start: 1505033
End: 1505800
Strand: Direct
Name: celS [H]
Synonym: bglu_2g11820
Alternate gene names: 238024573
Gene position: 1505033-1505800 (Clockwise)
Preceding gene: 238024568
Following gene: 238024582
Centisome position: 53.23
GC content: 66.15
Gene sequence:
>768_bases ATGCTATCGAATCCGTTGCACCGCGCCCGCTGGCTGCTGCCCCTGTCGATCCTGTTCGGCGGCACCGCCTCGGCGCAAAG CTGCATCTCGACGCAATACGGTTCACTCGCGCAAGGCAGCTACACGATCCAGAACGACGAATGGGGCCTGGCCAATAACC CCGGCGGCTGGCAGCAGGTCTGCACCGGCAGCGCCGCGAACAACAGTTGGTCGTCCACCTGGTGGTGGGCCACCGGCAGC GGCGGGATCAAGTCCTACCCGAGCATCTACCGCGGCTGGCAGATGGGGGCCTGGTCGCCCGACCCGGGCGGCTTCCCGGT GCAGGTGTCGGCCCAGGCGCCGCTGCCCACCCATGTCAGCTACAGCATGAGCGGCAACAACCAGTACGACGCCGCCTACG ACCTGTTCTTCTCGCCCTCGAACAACCCCGGCTCGCCCTCGGGCGAGATGATGGTCTGGCTTGCTTACTCGGGCACCCAG CCGGCCGGCAACCGGGTGGCGTCGGGCGTGAAGCTGGGCGGCATAGACGGCAGCTGGGACGTCTACCAGGGCAGCAACGG CTGGCCGGTATGGAGCTTCGTGCGCACTGCGCAGACCACCAGCTTCAGCGGCAACCTCCAGCCCTTCGTCTATTACCTGG CCTACACCAAGGGCTGGCTGAATCCGAGCTGGTACACGCTGAACACCCAGTTCGGCGTGGAGGTGATTCAGAGCAACGGC GCGAACGGCTCGGTCAACGTCAGCAGCTTCAGTGCCTCGGCACGCTAG
Upstream 100 bases:
>100_bases GTCTCGAATGCGGCCGGGGCCATCGAATATATTTCCAGAGACGTCCGCCTGCCGGCCAGCCGATCGAATCCGCCGCAATC CTTCCTTGTGGAGATCGTCC
Downstream 100 bases:
>100_bases TCGAGGCGACGGCGCGGCCGGCGCCGTGCGCGAGGCGTCATCGGTTCGGCCCGAAGGCCGGCGGCCCGCCCGTGCCGGTG CGGCCTCGGCCGCCGCGCCT
Product: glycoside hydrolase
Products: NA
Alternate protein names: Cellulase S; Endo-1,4-beta-glucanase S [H]
Number of amino acids: Translated: 255; Mature: 255
Protein sequence:
>255_residues MLSNPLHRARWLLPLSILFGGTASAQSCISTQYGSLAQGSYTIQNDEWGLANNPGGWQQVCTGSAANNSWSSTWWWATGS GGIKSYPSIYRGWQMGAWSPDPGGFPVQVSAQAPLPTHVSYSMSGNNQYDAAYDLFFSPSNNPGSPSGEMMVWLAYSGTQ PAGNRVASGVKLGGIDGSWDVYQGSNGWPVWSFVRTAQTTSFSGNLQPFVYYLAYTKGWLNPSWYTLNTQFGVEVIQSNG ANGSVNVSSFSASAR
Sequences:
>Translated_255_residues MLSNPLHRARWLLPLSILFGGTASAQSCISTQYGSLAQGSYTIQNDEWGLANNPGGWQQVCTGSAANNSWSSTWWWATGS GGIKSYPSIYRGWQMGAWSPDPGGFPVQVSAQAPLPTHVSYSMSGNNQYDAAYDLFFSPSNNPGSPSGEMMVWLAYSGTQ PAGNRVASGVKLGGIDGSWDVYQGSNGWPVWSFVRTAQTTSFSGNLQPFVYYLAYTKGWLNPSWYTLNTQFGVEVIQSNG ANGSVNVSSFSASAR >Mature_255_residues MLSNPLHRARWLLPLSILFGGTASAQSCISTQYGSLAQGSYTIQNDEWGLANNPGGWQQVCTGSAANNSWSSTWWWATGS GGIKSYPSIYRGWQMGAWSPDPGGFPVQVSAQAPLPTHVSYSMSGNNQYDAAYDLFFSPSNNPGSPSGEMMVWLAYSGTQ PAGNRVASGVKLGGIDGSWDVYQGSNGWPVWSFVRTAQTTSFSGNLQPFVYYLAYTKGWLNPSWYTLNTQFGVEVIQSNG ANGSVNVSSFSASAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 12 (cellulase H) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008985 - InterPro: IPR013319 - InterPro: IPR002594 [H]
Pfam domain/function: PF01670 Glyco_hydro_12 [H]
EC number: =3.2.1.4 [H]
Molecular weight: Translated: 27439; Mature: 27439
Theoretical pI: Translated: 7.39; Mature: 7.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSNPLHRARWLLPLSILFGGTASAQSCISTQYGSLAQGSYTIQNDEWGLANNPGGWQQV CCCCCCHHHHHHEEEEEEECCCCCHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCHHHH CTGSAANNSWSSTWWWATGSGGIKSYPSIYRGWQMGAWSPDPGGFPVQVSAQAPLPTHVS HCCCCCCCCCCCEEEEEECCCCCCCCHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCEEE YSMSGNNQYDAAYDLFFSPSNNPGSPSGEMMVWLAYSGTQPAGNRVASGVKLGGIDGSWD EEECCCCCCCEEEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCHHHCCEEECCCCCCCE VYQGSNGWPVWSFVRTAQTTSFSGNLQPFVYYLAYTKGWLNPSWYTLNTQFGVEVIQSNG EEECCCCCCHHHHHHHHCCCCCCCCCCCEEEEEEEHHCCCCCCEEEEECCCCEEEEECCC ANGSVNVSSFSASAR CCCEEEEECCCCCCC >Mature Secondary Structure MLSNPLHRARWLLPLSILFGGTASAQSCISTQYGSLAQGSYTIQNDEWGLANNPGGWQQV CCCCCCHHHHHHEEEEEEECCCCCHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCHHHH CTGSAANNSWSSTWWWATGSGGIKSYPSIYRGWQMGAWSPDPGGFPVQVSAQAPLPTHVS HCCCCCCCCCCCEEEEEECCCCCCCCHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCEEE YSMSGNNQYDAAYDLFFSPSNNPGSPSGEMMVWLAYSGTQPAGNRVASGVKLGGIDGSWD EEECCCCCCCEEEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCHHHCCEEECCCCCCCE VYQGSNGWPVWSFVRTAQTTSFSGNLQPFVYYLAYTKGWLNPSWYTLNTQFGVEVIQSNG EEECCCCCCHHHHHHHHCCCCCCCCCCCEEEEEEEHHCCCCCCEEEEECCCCEEEEECCC ANGSVNVSSFSASAR CCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2379837 [H]