Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
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Accession | NC_012695 |
Length | 4,098,576 |
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The map label for this gene is pgsA [H]
Identifier: 237813183
GI number: 237813183
Start: 2872026
End: 2872649
Strand: Reverse
Name: pgsA [H]
Synonym: GBP346_A2948
Alternate gene names: 237813183
Gene position: 2872649-2872026 (Counterclockwise)
Preceding gene: 237813184
Following gene: 237813180
Centisome position: 70.09
GC content: 63.46
Gene sequence:
>624_bases ATGGCAAATCCTTCAACCGTGTCGCGTGCCATGCCGTTCAATTTCCCGATTTTCCTGACGTGGGTGCGAATCGTGCTGAT TCCGCTCGTCGTCGGTGTGTTTTATCTGCCGGACACGATGCTGAGCGCCGACCATCGCAATCTGGCGGCGGCCGTGATTT TCATTCTCGCCGCGCTGACCGACTGGTTCGACGGTTATCTCGCGCGGAAGTGGAACCAGACGTCGGCGTTCGGCGCGTTT CTCGACCCGGTCGCCGACAAGCTGATGGTGACGGCCGCGCTGCTGATGCTCGTGCAGCTCGCGCGCATCGACGCGGCGAT CGCGCTCGTGATCGTCGGCCGCGAAATCGCGATCTCGGCGCTGCGCGAATGGATGGCGCAGATCGGCGCATCGAAGAGCG TCGCGGTGAATTCGCTGGGCAAGTTCAAGACCGCGTGCCAGATGGTCGCGATTCCGATGCTGCTCTTCTACGGCCGGCTG CCGTTCGGCGGCGGCGTCGCGATCGACACGCGCGGATGGGGCGAATGGCTGATCTATCTCGCGGCCGTGTTGACCATCTG GTCGATGCTTTACTACATGAAGCTCGCGTGGCCGCAGATTCGCGAGCGCGGCGGCGCGGCCTGA
Upstream 100 bases:
>100_bases TGAGCGCGGGCGCGCCGCCGGGCGGCCTTGCGCGGCTCGCGCCGGGCGGCGCGGCCCGTGCCGGGCGCCTTGCTTGTGGC GGCGCGGGCGACGCGGCACA
Downstream 100 bases:
>100_bases GCGCGCCGCGGACCCGCACGGCGAGGCGCGAGGCGAACACACGCTGAACTGCAGGCCGGATGGCGCGTCGGCAAGGGCAT CGAGGTCGTCGAAGAAAAAG
Product: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
Products: NA
Alternate protein names: Phosphatidylglycerophosphate synthase; PGP synthase [H]
Number of amino acids: Translated: 207; Mature: 206
Protein sequence:
>207_residues MANPSTVSRAMPFNFPIFLTWVRIVLIPLVVGVFYLPDTMLSADHRNLAAAVIFILAALTDWFDGYLARKWNQTSAFGAF LDPVADKLMVTAALLMLVQLARIDAAIALVIVGREIAISALREWMAQIGASKSVAVNSLGKFKTACQMVAIPMLLFYGRL PFGGGVAIDTRGWGEWLIYLAAVLTIWSMLYYMKLAWPQIRERGGAA
Sequences:
>Translated_207_residues MANPSTVSRAMPFNFPIFLTWVRIVLIPLVVGVFYLPDTMLSADHRNLAAAVIFILAALTDWFDGYLARKWNQTSAFGAF LDPVADKLMVTAALLMLVQLARIDAAIALVIVGREIAISALREWMAQIGASKSVAVNSLGKFKTACQMVAIPMLLFYGRL PFGGGVAIDTRGWGEWLIYLAAVLTIWSMLYYMKLAWPQIRERGGAA >Mature_206_residues ANPSTVSRAMPFNFPIFLTWVRIVLIPLVVGVFYLPDTMLSADHRNLAAAVIFILAALTDWFDGYLARKWNQTSAFGAFL DPVADKLMVTAALLMLVQLARIDAAIALVIVGREIAISALREWMAQIGASKSVAVNSLGKFKTACQMVAIPMLLFYGRLP FGGGVAIDTRGWGEWLIYLAAVLTIWSMLYYMKLAWPQIRERGGAA
Specific function: This protein catalyzes the committed step to the synthesis of the acidic phospholipids [H]
COG id: COG0558
COG function: function code I; Phosphatidylglycerophosphate synthase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDP-alcohol phosphatidyltransferase class-I family [H]
Homologues:
Organism=Escherichia coli, GI1788220, Length=192, Percent_Identity=47.9166666666667, Blast_Score=152, Evalue=2e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000462 - InterPro: IPR004570 [H]
Pfam domain/function: PF01066 CDP-OH_P_transf [H]
EC number: =2.7.8.5 [H]
Molecular weight: Translated: 22801; Mature: 22670
Theoretical pI: Translated: 9.91; Mature: 9.91
Prosite motif: PS00379 CDP_ALCOHOL_P_TRANSF
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANPSTVSRAMPFNFPIFLTWVRIVLIPLVVGVFYLPDTMLSADHRNLAAAVIFILAALT CCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHCCHHHHHHHHHHHHHHHH DWFDGYLARKWNQTSAFGAFLDPVADKLMVTAALLMLVQLARIDAAIALVIVGREIAISA HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LREWMAQIGASKSVAVNSLGKFKTACQMVAIPMLLFYGRLPFGGGVAIDTRGWGEWLIYL HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHH AAVLTIWSMLYYMKLAWPQIRERGGAA HHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure ANPSTVSRAMPFNFPIFLTWVRIVLIPLVVGVFYLPDTMLSADHRNLAAAVIFILAALT CCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHCCHHHHHHHHHHHHHHHH DWFDGYLARKWNQTSAFGAFLDPVADKLMVTAALLMLVQLARIDAAIALVIVGREIAISA HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LREWMAQIGASKSVAVNSLGKFKTACQMVAIPMLLFYGRLPFGGGVAIDTRGWGEWLIYL HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHH AAVLTIWSMLYYMKLAWPQIRERGGAA HHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 14528314 [H]