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The map label for this gene is nocQ [H]

Identifier: 23501836

GI number: 23501836

Start: 925831

End: 926553

Strand: Reverse

Name: nocQ [H]

Synonym: BR0953

Alternate gene names: 23501836

Gene position: 926553-925831 (Counterclockwise)

Preceding gene: 23501837

Following gene: 23501835

Centisome position: 43.96

GC content: 57.26

Gene sequence:

>723_bases
ATGGAACACTACGCCACCTTGTTGAGTTTCGGTCCCGATGGCTGGGGTATCAGCATTGCCAAAGGACTTCTTGTTACCGT
CAGTCTGGCACTCGCCACACTTCCCGTTGGTCTCATCCTTGGTTTTCTGGTCGCTCTGGGCAAGCAGTCCAGCGAACCTT
CGATGCGGCTTGCGGCTAATATCTACACCACCATCTTTCGCGGTCTGCCGGAACTCCTGACGCTCTTCCTGGTCTATTTC
GGGGCCTCGCTTGGGCTTCAGCGTTTGCTCCATCTGTTCGGCATCGACGCGAATATCGAGATCAATGCCTTCGTAGCGGG
CATGGTGGCTCTCGGTTTCGTCTTCTCATCCTATTCCAGCGAGGTATTCCTTTCCGCTTTCCGCGCCATCCCGCACGGGC
AATATGAAGGCGGATACGCGGTGGGCCTGTCACGCCGGCAGACGATGCGCATGGTCATTTTCCCGCAATTGATCCGCATT
GCACTTCCGGGCCTTGCCAATCTGTGGCTGGTGCTGCTCAAGGATACGTCGCTTGTTTCGGTCATCACCCTGTCCGACAT
TCTTCGCCAGACCTCGATTGCTGCGCGCGTAACCAAGGAACCCTTCCTGTTCTTCGGCATCGCCTGCCTGCTCTATCTGG
CGCTTGCGATCATTTCGTCCTATTTCATCAACCGTATCGCCCGCTGGGCCGATTCCGGCGCCAATCGCCCGCGGGGAGCG
TAA

Upstream 100 bases:

>100_bases
GAAACCGGCTTTGCATTCGGAAATGTATCAAGACAAAGAAAATAGGGCGGCTTTACCGATTCCATTCAAACTGGAACCGC
TCTAGGAAAAGAACAGGCGC

Downstream 100 bases:

>100_bases
CCATGAACCAAGTCGCCTCCAATCCGTCCGCCGAGATAATGGCTCCTCCGCCAGTCGTGAAAACATGGACGCGAACGCGG
ATAGCCGGCCATATCATTGT

Product: amino acid ABC transporter permease

Products: ADP; phosphate; L-arginine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 240; Mature: 240

Protein sequence:

>240_residues
MEHYATLLSFGPDGWGISIAKGLLVTVSLALATLPVGLILGFLVALGKQSSEPSMRLAANIYTTIFRGLPELLTLFLVYF
GASLGLQRLLHLFGIDANIEINAFVAGMVALGFVFSSYSSEVFLSAFRAIPHGQYEGGYAVGLSRRQTMRMVIFPQLIRI
ALPGLANLWLVLLKDTSLVSVITLSDILRQTSIAARVTKEPFLFFGIACLLYLALAIISSYFINRIARWADSGANRPRGA

Sequences:

>Translated_240_residues
MEHYATLLSFGPDGWGISIAKGLLVTVSLALATLPVGLILGFLVALGKQSSEPSMRLAANIYTTIFRGLPELLTLFLVYF
GASLGLQRLLHLFGIDANIEINAFVAGMVALGFVFSSYSSEVFLSAFRAIPHGQYEGGYAVGLSRRQTMRMVIFPQLIRI
ALPGLANLWLVLLKDTSLVSVITLSDILRQTSIAARVTKEPFLFFGIACLLYLALAIISSYFINRIARWADSGANRPRGA
>Mature_240_residues
MEHYATLLSFGPDGWGISIAKGLLVTVSLALATLPVGLILGFLVALGKQSSEPSMRLAANIYTTIFRGLPELLTLFLVYF
GASLGLQRLLHLFGIDANIEINAFVAGMVALGFVFSSYSSEVFLSAFRAIPHGQYEGGYAVGLSRRQTMRMVIFPQLIRI
ALPGLANLWLVLLKDTSLVSVITLSDILRQTSIAARVTKEPFLFFGIACLLYLALAIISSYFINRIARWADSGANRPRGA

Specific function: Component of the nopaline active transport system probably consisting of four subunits:Q, M, P and T. This system is also capable of transporting octopine provided that catabolic functions are induced with nopaline [H]

COG id: COG4215

COG function: function code E; ABC-type arginine transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787087, Length=225, Percent_Identity=37.3333333333333, Blast_Score=150, Evalue=1e-37,
Organism=Escherichia coli, GI1788646, Length=219, Percent_Identity=36.5296803652968, Blast_Score=149, Evalue=2e-37,
Organism=Escherichia coli, GI1788226, Length=218, Percent_Identity=32.5688073394495, Blast_Score=116, Evalue=2e-27,
Organism=Escherichia coli, GI1788645, Length=235, Percent_Identity=30.2127659574468, Blast_Score=97, Evalue=8e-22,
Organism=Escherichia coli, GI87082239, Length=215, Percent_Identity=29.7674418604651, Blast_Score=86, Evalue=3e-18,
Organism=Escherichia coli, GI1786873, Length=211, Percent_Identity=29.3838862559242, Blast_Score=84, Evalue=8e-18,
Organism=Escherichia coli, GI1787030, Length=208, Percent_Identity=25.9615384615385, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1787086, Length=219, Percent_Identity=26.4840182648402, Blast_Score=77, Evalue=9e-16,
Organism=Escherichia coli, GI1786874, Length=178, Percent_Identity=23.5955056179775, Blast_Score=62, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 26090; Mature: 26090

Theoretical pI: Translated: 9.99; Mature: 9.99

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEHYATLLSFGPDGWGISIAKGLLVTVSLALATLPVGLILGFLVALGKQSSEPSMRLAAN
CCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
IYTTIFRGLPELLTLFLVYFGASLGLQRLLHLFGIDANIEINAFVAGMVALGFVFSSYSS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCH
EVFLSAFRAIPHGQYEGGYAVGLSRRQTMRMVIFPQLIRIALPGLANLWLVLLKDTSLVS
HHHHHHHHHCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHH
VITLSDILRQTSIAARVTKEPFLFFGIACLLYLALAIISSYFINRIARWADSGANRPRGA
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MEHYATLLSFGPDGWGISIAKGLLVTVSLALATLPVGLILGFLVALGKQSSEPSMRLAAN
CCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
IYTTIFRGLPELLTLFLVYFGASLGLQRLLHLFGIDANIEINAFVAGMVALGFVFSSYSS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCH
EVFLSAFRAIPHGQYEGGYAVGLSRRQTMRMVIFPQLIRIALPGLANLWLVLLKDTSLVS
HHHHHHHHHCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHH
VITLSDILRQTSIAARVTKEPFLFFGIACLLYLALAIISSYFINRIARWADSGANRPRGA
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; L-arginine [Periplasm]; H2O [C]

Specific reaction: ATP + L-arginine [Periplasm] + H2O = ADP + phosphate + L-arginine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1732218; 11743193; 11743194 [H]