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The map label for this gene is nocM [H]

Identifier: 23501835

GI number: 23501835

Start: 924995

End: 925828

Strand: Reverse

Name: nocM [H]

Synonym: BR0952

Alternate gene names: 23501835

Gene position: 925828-924995 (Counterclockwise)

Preceding gene: 23501836

Following gene: 23501834

Centisome position: 43.92

GC content: 56.35

Gene sequence:

>834_bases
ATGAACCAAGTCGCCTCCAATCCGTCCGCCGAGATAATGGCTCCTCCGCCAGTCGTGAAAACATGGACGCGAACGCGGAT
AGCCGGCCATATCATTGTCGGCGTGTGGTTCCTGCTTTTTGCAGGGCTTGCAATCTATCTCTATAATGGCTGGCGTATCG
ACCTTATCGAAACCTATGGGCCGCGATACTGGTCCGGCCTGCTCATCACGCTAAAACTGGTCGCCATTTCCATTGTCATC
GGAGCGCTGTTATCGCTGCCCATCACGGCAGCGCGCATGTCGAACAGCCGGTGGTTGCGTTCCCTTGCTTTCGGCTATGT
CTATTTTTTCCGCGGGACGCCGCTGCTCGCCCAGACCTTCCTGATCTATTACGGCTTCGGCACGTTCCGTCCGTTTCTGG
AAAGCGTCGGGCTTTGGGTGTTCTTCCGCGATGCGTGGAATTGCGCCATTCTGGCCTTTTCGCTCAACACGGCCGCTTAT
CAGGCTGAAATCCTGCGCGGCGCCATCGAAAGCGTAGCGGTCGGCCAATGGGAAGGCGCTGCCGCATTGGGCATCTCGAA
GCGCGTCACCTTCTGGAAGGTCATTCTTCCACAGGCCCTCATCGTCGCGCTGCGCCCTTATGGCAATGAAATTATCCTGA
TGATCAAGGGATCGGCCATTGTCGCGATCATCACAGTGCTTGATCTGATGGGCGAAACACGCCGCGCCTATTCGCGTACG
TTCGATTTTCAGACCTATCTATGGGCAGCCGTGATCTATCTTCTGATGGTCGAAATTCTGCGCCACATATGGGATGCGCT
TGAGCGGCGCCTGACCCGGCATCTCAAACGCTAG

Upstream 100 bases:

>100_bases
GCCTGCTCTATCTGGCGCTTGCGATCATTTCGTCCTATTTCATCAACCGTATCGCCCGCTGGGCCGATTCCGGCGCCAAT
CGCCCGCGGGGAGCGTAACC

Downstream 100 bases:

>100_bases
AGTTTTCAGCAAAACCGTTCCACACCTTTGGCTCGAAAATGCTCTAAATAGAAAATCAATTTTACATGTTCAGGCCCCGG
ACAGCTTGCAGCTACCGGGG

Product: amino acid ABC transporter permease

Products: ADP; phosphate; L-arginine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 277; Mature: 277

Protein sequence:

>277_residues
MNQVASNPSAEIMAPPPVVKTWTRTRIAGHIIVGVWFLLFAGLAIYLYNGWRIDLIETYGPRYWSGLLITLKLVAISIVI
GALLSLPITAARMSNSRWLRSLAFGYVYFFRGTPLLAQTFLIYYGFGTFRPFLESVGLWVFFRDAWNCAILAFSLNTAAY
QAEILRGAIESVAVGQWEGAAALGISKRVTFWKVILPQALIVALRPYGNEIILMIKGSAIVAIITVLDLMGETRRAYSRT
FDFQTYLWAAVIYLLMVEILRHIWDALERRLTRHLKR

Sequences:

>Translated_277_residues
MNQVASNPSAEIMAPPPVVKTWTRTRIAGHIIVGVWFLLFAGLAIYLYNGWRIDLIETYGPRYWSGLLITLKLVAISIVI
GALLSLPITAARMSNSRWLRSLAFGYVYFFRGTPLLAQTFLIYYGFGTFRPFLESVGLWVFFRDAWNCAILAFSLNTAAY
QAEILRGAIESVAVGQWEGAAALGISKRVTFWKVILPQALIVALRPYGNEIILMIKGSAIVAIITVLDLMGETRRAYSRT
FDFQTYLWAAVIYLLMVEILRHIWDALERRLTRHLKR
>Mature_277_residues
MNQVASNPSAEIMAPPPVVKTWTRTRIAGHIIVGVWFLLFAGLAIYLYNGWRIDLIETYGPRYWSGLLITLKLVAISIVI
GALLSLPITAARMSNSRWLRSLAFGYVYFFRGTPLLAQTFLIYYGFGTFRPFLESVGLWVFFRDAWNCAILAFSLNTAAY
QAEILRGAIESVAVGQWEGAAALGISKRVTFWKVILPQALIVALRPYGNEIILMIKGSAIVAIITVLDLMGETRRAYSRT
FDFQTYLWAAVIYLLMVEILRHIWDALERRLTRHLKR

Specific function: Component of the nopaline active transport system probably consisting of four subunits:Q, M, P and T. This system is also capable of transporting octopine provided that catabolic functions are induced with nopaline [H]

COG id: COG4160

COG function: function code E; ABC-type arginine/histidine transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787086, Length=212, Percent_Identity=36.7924528301887, Blast_Score=142, Evalue=2e-35,
Organism=Escherichia coli, GI1788645, Length=231, Percent_Identity=37.6623376623377, Blast_Score=134, Evalue=9e-33,
Organism=Escherichia coli, GI1788226, Length=226, Percent_Identity=37.6106194690265, Blast_Score=124, Evalue=6e-30,
Organism=Escherichia coli, GI1787087, Length=131, Percent_Identity=39.6946564885496, Blast_Score=97, Evalue=2e-21,
Organism=Escherichia coli, GI1788646, Length=216, Percent_Identity=29.1666666666667, Blast_Score=81, Evalue=9e-17,
Organism=Escherichia coli, GI1787030, Length=216, Percent_Identity=29.6296296296296, Blast_Score=75, Evalue=3e-15,
Organism=Escherichia coli, GI1786874, Length=218, Percent_Identity=27.0642201834862, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI87082239, Length=242, Percent_Identity=26.8595041322314, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1786873, Length=170, Percent_Identity=31.1764705882353, Blast_Score=62, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31402; Mature: 31402

Theoretical pI: Translated: 10.35; Mature: 10.35

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQVASNPSAEIMAPPPVVKTWTRTRIAGHIIVGVWFLLFAGLAIYLYNGWRIDLIETYG
CCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCC
PRYWSGLLITLKLVAISIVIGALLSLPITAARMSNSRWLRSLAFGYVYFFRGTPLLAQTF
CHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCHHHHHHHHHHHHHHHHCCCHHHHHHH
LIYYGFGTFRPFLESVGLWVFFRDAWNCAILAFSLNTAAYQAEILRGAIESVAVGQWEGA
HHHHHHHHHHHHHHHCCEEEEEECCCCEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCC
AALGISKRVTFWKVILPQALIVALRPYGNEIILMIKGSAIVAIITVLDLMGETRRAYSRT
HHHCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHH
FDFQTYLWAAVIYLLMVEILRHIWDALERRLTRHLKR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNQVASNPSAEIMAPPPVVKTWTRTRIAGHIIVGVWFLLFAGLAIYLYNGWRIDLIETYG
CCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCC
PRYWSGLLITLKLVAISIVIGALLSLPITAARMSNSRWLRSLAFGYVYFFRGTPLLAQTF
CHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCHHHHHHHHHHHHHHHHCCCHHHHHHH
LIYYGFGTFRPFLESVGLWVFFRDAWNCAILAFSLNTAAYQAEILRGAIESVAVGQWEGA
HHHHHHHHHHHHHHHCCEEEEEECCCCEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCC
AALGISKRVTFWKVILPQALIVALRPYGNEIILMIKGSAIVAIITVLDLMGETRRAYSRT
HHHCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHH
FDFQTYLWAAVIYLLMVEILRHIWDALERRLTRHLKR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; L-arginine [Periplasm]; H2O [C]

Specific reaction: ATP + L-arginine [Periplasm] + H2O = ADP + phosphate + L-arginine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1732218; 11743193; 11743194 [H]