Click here to switch to the map view.

The map label for this gene is opuAC [H]

Identifier: 23100909

GI number: 23100909

Start: 3592006

End: 3592899

Strand: Reverse

Name: opuAC [H]

Synonym: OB3454

Alternate gene names: 23100909

Gene position: 3592899-3592006 (Counterclockwise)

Preceding gene: 23100910

Following gene: 23100908

Centisome position: 98.96

GC content: 40.6

Gene sequence:

>894_bases
ATGGCTACATGGAGCTTAAAACGTGCAGGTCTAATTTCAGGACTAGCATTATCATTATTTGCAGCAGGTTGTGGAAGTGA
CGATGGTGAAAATAGTGGTGAAGGAGATTCTGCTGAAGAAAATAAAGAAATTGAATTAGCATACGTGGAGTGGGATACGG
AAGTAGCATCTACACACGTAATTGGTAAAGTACTAGAAGACTTAGGTTATGAAGTGGAATTAACACCACTAGATAATGCA
ATTATGTGGGAAGCTGTTGCTAATGGTGAAGCTGACGGAATGGTTGCAGCATGGTTACCAAATACTCATGCTGAGCAGTA
TGAATCGTATGGCGATCAAGTAGAAAGTCTAGGTGTAAACTTAGAGGGAGCGAAAATTGGTCTAGTTGTTCCTGAATATA
TGGATGTTAATTCTATTGAAGATCTTTCTGACGAAGCTGGACAAACAATTACTGGTATTGAGCCAGGTGCAGGTGTTGTT
GCCGCATCGGAAGACGCTGTAGAAACATATGATAACCTAGATGGTTGGTCTGTTCAGACTTCTTCTAGTGGTGCGATGGC
TACTGCTTTAGGTAGTGCAATTGACAATGAAGAAGAAATTATTGTAACTGGTTGGTCTCCACACTGGAAATTCCAAGCGT
ATGACTTAAAATATCTTGAAGATCCAGAAGGCGTATTTGGTGACGCTGAAACCATTGAAACTATGGTTCGTGAAGGTCTA
GAAGAAGATATGCCAGAAGCATACACAGTACTTGATAACTTCCAATGGGATACTGCAGCGATGGAAGAAGTAATGCTTAA
TATCAGTGAAGGTGCTGATCCAGAACAAGCAGCTGCTGATTGGGTAGAAGCGAATCAAGATAAAGTAGATGAATGGACAA
AAGATGTAGAGTAA

Upstream 100 bases:

>100_bases
ATATGAACAAAGAAAAAGAATAACCTTGTGGGTCACCTCTTTTCATGTATTTCATGACGAGAGTCTATATAACTAATCTA
TACTAAAAGGAGAGATTTTT

Downstream 100 bases:

>100_bases
GATAAGACTGTCGTAAAGGGTTTCTATTATCAATATGGTAATAGAGGCCCTTTTTTTATGTTACATATACGGTGATCTTC
CGTACATTAACTATATAAAA

Product: glycine betaine ABC transporter glycine betaine-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 297; Mature: 296

Protein sequence:

>297_residues
MATWSLKRAGLISGLALSLFAAGCGSDDGENSGEGDSAEENKEIELAYVEWDTEVASTHVIGKVLEDLGYEVELTPLDNA
IMWEAVANGEADGMVAAWLPNTHAEQYESYGDQVESLGVNLEGAKIGLVVPEYMDVNSIEDLSDEAGQTITGIEPGAGVV
AASEDAVETYDNLDGWSVQTSSSGAMATALGSAIDNEEEIIVTGWSPHWKFQAYDLKYLEDPEGVFGDAETIETMVREGL
EEDMPEAYTVLDNFQWDTAAMEEVMLNISEGADPEQAAADWVEANQDKVDEWTKDVE

Sequences:

>Translated_297_residues
MATWSLKRAGLISGLALSLFAAGCGSDDGENSGEGDSAEENKEIELAYVEWDTEVASTHVIGKVLEDLGYEVELTPLDNA
IMWEAVANGEADGMVAAWLPNTHAEQYESYGDQVESLGVNLEGAKIGLVVPEYMDVNSIEDLSDEAGQTITGIEPGAGVV
AASEDAVETYDNLDGWSVQTSSSGAMATALGSAIDNEEEIIVTGWSPHWKFQAYDLKYLEDPEGVFGDAETIETMVREGL
EEDMPEAYTVLDNFQWDTAAMEEVMLNISEGADPEQAAADWVEANQDKVDEWTKDVE
>Mature_296_residues
ATWSLKRAGLISGLALSLFAAGCGSDDGENSGEGDSAEENKEIELAYVEWDTEVASTHVIGKVLEDLGYEVELTPLDNAI
MWEAVANGEADGMVAAWLPNTHAEQYESYGDQVESLGVNLEGAKIGLVVPEYMDVNSIEDLSDEAGQTITGIEPGAGVVA
ASEDAVETYDNLDGWSVQTSSSGAMATALGSAIDNEEEIIVTGWSPHWKFQAYDLKYLEDPEGVFGDAETIETMVREGLE
EDMPEAYTVLDNFQWDTAAMEEVMLNISEGADPEQAAADWVEANQDKVDEWTKDVE

Specific function: Involved in a multicomponent binding-protein-dependent transport system for glycine betaine [H]

COG id: COG2113

COG function: function code E; ABC-type proline/glycine betaine transport systems, periplasmic components

Gene ontology:

Cell location: Cell membrane; Lipid-anchor [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007210 [H]

Pfam domain/function: PF04069 OpuAC [H]

EC number: NA

Molecular weight: Translated: 32068; Mature: 31937

Theoretical pI: Translated: 3.42; Mature: 3.42

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATWSLKRAGLISGLALSLFAAGCGSDDGENSGEGDSAEENKEIELAYVEWDTEVASTHV
CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCHHHHHHH
IGKVLEDLGYEVELTPLDNAIMWEAVANGEADGMVAAWLPNTHAEQYESYGDQVESLGVN
HHHHHHHCCCEEEEEECCCCEEEHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCC
LEGAKIGLVVPEYMDVNSIEDLSDEAGQTITGIEPGAGVVAASEDAVETYDNLDGWSVQT
CCCCEEEEECCCCCCCCCHHHHHHHHCCEEECCCCCCCEEEECCHHHHHHCCCCCCEEEE
SSSGAMATALGSAIDNEEEIIVTGWSPHWKFQAYDLKYLEDPEGVFGDAETIETMVREGL
CCCCCHHHHHHHHCCCCCCEEEECCCCCCEEEEECCEEECCCCCCCCCHHHHHHHHHHHH
EEDMPEAYTVLDNFQWDTAAMEEVMLNISEGADPEQAAADWVEANQDKVDEWTKDVE
HHCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHCCC
>Mature Secondary Structure 
ATWSLKRAGLISGLALSLFAAGCGSDDGENSGEGDSAEENKEIELAYVEWDTEVASTHV
CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCHHHHHHH
IGKVLEDLGYEVELTPLDNAIMWEAVANGEADGMVAAWLPNTHAEQYESYGDQVESLGVN
HHHHHHHCCCEEEEEECCCCEEEHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCC
LEGAKIGLVVPEYMDVNSIEDLSDEAGQTITGIEPGAGVVAASEDAVETYDNLDGWSVQT
CCCCEEEEECCCCCCCCCHHHHHHHHCCEEECCCCCCCEEEECCHHHHHHCCCCCCEEEE
SSSGAMATALGSAIDNEEEIIVTGWSPHWKFQAYDLKYLEDPEGVFGDAETIETMVREGL
CCCCCHHHHHHHHCCCCCCEEEECCCCCCEEEEECCEEECCCCCCCCCHHHHHHHHHHHH
EEDMPEAYTVLDNFQWDTAAMEEVMLNISEGADPEQAAADWVEANQDKVDEWTKDVE
HHCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7622480; 8969502; 9384377 [H]