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The map label for this gene is yciC [H]

Identifier: 23100885

GI number: 23100885

Start: 3569001

End: 3570176

Strand: Reverse

Name: yciC [H]

Synonym: OB3430

Alternate gene names: 23100885

Gene position: 3570176-3569001 (Counterclockwise)

Preceding gene: 23100886

Following gene: 23100884

Centisome position: 98.34

GC content: 37.16

Gene sequence:

>1176_bases
TTGTCTAAGAGAGTACCAGTCACGGTGTTGAGCGGATATTTAGGCGCTGGGAAAACAACACTGCTGAATTATATATTAAA
TAATAAACAATACCTAAAAATAGCTGTCATCGTAAATGATATGAGTGAAGTAAATATCGATGCAAGTATGGTGAAGATGG
GCGGATTCAGTAGAACGGAAGAAAAGCTAGTAGCGTTACAGAATGGTTGTATCTGCTGTACGTTAAGAGAAGATTTGATA
CAGGAAGTAGATAATCTTGCTAAACTGGATATCGATTATATCGTTATAGAATCTTCTGGTATTTCAGAACCAATTCCAGT
TGCACAAAGTTTTATTTATGAGGACGAAGAATTGAAAATTAACCTTAGTGATCATTGTTGCTTGGTTACGATGGCAACGG
TCGTGGACGCAAATCGCTTTTGGGATGATTATGGCTCTGGAGACAGTTTGCTAGATCGTAACCAAGAAGTAAATGAAAAT
GATGAAAGAGAAGTAATTGATTTACTCATCGATCAAATCGAATTTGCAAATGTAATCATAGTAAATAAAGTAGATTTAAT
TGATACGATACACATGGAAGAATTAATGGCAGTACTTCACCAGTTAAATCCTGAGGCACAAATAATTCAATCGGAGTACG
GTGTCGTACCATTGGAATCTATACTTCATACGAGGTTGTTTGATTTTGAAAAAGCTAGCCAAGGGGCTGGTTGGATAAAA
GAGTTAAATGAGGAACATATTCCAGAAACAGAGGAATATGGGATAAGTTCGTTTGTGTATCGCCGTAATAGACCTTTCCA
TCCACAAAGATGGAATGAATGGTTGAATAATTGGCCGAATACGATTATTCGAGCAAAGGGATTTTTCTGGTTAGCTTCAA
GGAATAATGTTACCGGATTACTCTCACAAGCTGGCTCTTCACTCTCTATTCAAGGAGCGGGAAATTGGGTTGCCACATAT
CCAAAAGAAGAGCAAAAGTCATTAATTAAGGAAGATCCTAACCTTTTAGAGTACTGGGATAGTAAGCACGGGGACAGAAT
GAATGACCTAGTTTTTATTGGGATAAAGATGGATAAACAAGCAATTATGAAAGAGCTAGATTCATGCTTATTAACCGATT
CGGAAATGGAATCCGATTGGAATAAATTGATCGATCCATTGCCGGCTTTTAGTTAG

Upstream 100 bases:

>100_bases
AGCTTTAGCAGAGCTTGAGATAGGGCCAGTTTCACGTAATATTGCCGGAGCGAGAAAAGCTACCGAAAGAATCGTACAAA
CTGCATAGGAGGTAAACCAA

Downstream 100 bases:

>100_bases
AAAAAATTTATAAAGTGAAGTATTTTTTTAGTGTTTTAATCGTAATGATTACGTTTTTTAGAGAGACGCAAATCCATCTA
ATGGGCTATTAAAATTTGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 391; Mature: 390

Protein sequence:

>391_residues
MSKRVPVTVLSGYLGAGKTTLLNYILNNKQYLKIAVIVNDMSEVNIDASMVKMGGFSRTEEKLVALQNGCICCTLREDLI
QEVDNLAKLDIDYIVIESSGISEPIPVAQSFIYEDEELKINLSDHCCLVTMATVVDANRFWDDYGSGDSLLDRNQEVNEN
DEREVIDLLIDQIEFANVIIVNKVDLIDTIHMEELMAVLHQLNPEAQIIQSEYGVVPLESILHTRLFDFEKASQGAGWIK
ELNEEHIPETEEYGISSFVYRRNRPFHPQRWNEWLNNWPNTIIRAKGFFWLASRNNVTGLLSQAGSSLSIQGAGNWVATY
PKEEQKSLIKEDPNLLEYWDSKHGDRMNDLVFIGIKMDKQAIMKELDSCLLTDSEMESDWNKLIDPLPAFS

Sequences:

>Translated_391_residues
MSKRVPVTVLSGYLGAGKTTLLNYILNNKQYLKIAVIVNDMSEVNIDASMVKMGGFSRTEEKLVALQNGCICCTLREDLI
QEVDNLAKLDIDYIVIESSGISEPIPVAQSFIYEDEELKINLSDHCCLVTMATVVDANRFWDDYGSGDSLLDRNQEVNEN
DEREVIDLLIDQIEFANVIIVNKVDLIDTIHMEELMAVLHQLNPEAQIIQSEYGVVPLESILHTRLFDFEKASQGAGWIK
ELNEEHIPETEEYGISSFVYRRNRPFHPQRWNEWLNNWPNTIIRAKGFFWLASRNNVTGLLSQAGSSLSIQGAGNWVATY
PKEEQKSLIKEDPNLLEYWDSKHGDRMNDLVFIGIKMDKQAIMKELDSCLLTDSEMESDWNKLIDPLPAFS
>Mature_390_residues
SKRVPVTVLSGYLGAGKTTLLNYILNNKQYLKIAVIVNDMSEVNIDASMVKMGGFSRTEEKLVALQNGCICCTLREDLIQ
EVDNLAKLDIDYIVIESSGISEPIPVAQSFIYEDEELKINLSDHCCLVTMATVVDANRFWDDYGSGDSLLDRNQEVNEND
EREVIDLLIDQIEFANVIIVNKVDLIDTIHMEELMAVLHQLNPEAQIIQSEYGVVPLESILHTRLFDFEKASQGAGWIKE
LNEEHIPETEEYGISSFVYRRNRPFHPQRWNEWLNNWPNTIIRAKGFFWLASRNNVTGLLSQAGSSLSIQGAGNWVATYP
KEEQKSLIKEDPNLLEYWDSKHGDRMNDLVFIGIKMDKQAIMKELDSCLLTDSEMESDWNKLIDPLPAFS

Specific function: May bind GTP. Might act as metal chaperone (Potential). Contributes to optimal growth under starvation for zinc [H]

COG id: COG0523

COG function: function code R; Putative GTPases (G3E family)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 cobW C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI33469141, Length=398, Percent_Identity=26.1306532663317, Blast_Score=120, Evalue=3e-27,
Organism=Homo sapiens, GI126722884, Length=398, Percent_Identity=25.8793969849246, Blast_Score=118, Evalue=9e-27,
Organism=Homo sapiens, GI148727351, Length=398, Percent_Identity=25.8793969849246, Blast_Score=115, Evalue=6e-26,
Organism=Homo sapiens, GI146231952, Length=399, Percent_Identity=27.3182957393484, Blast_Score=114, Evalue=2e-25,
Organism=Homo sapiens, GI223941779, Length=214, Percent_Identity=29.4392523364486, Blast_Score=106, Evalue=4e-23,
Organism=Homo sapiens, GI223941776, Length=384, Percent_Identity=25.78125, Blast_Score=100, Evalue=3e-21,
Organism=Homo sapiens, GI119120938, Length=113, Percent_Identity=35.3982300884956, Blast_Score=87, Evalue=3e-17,
Organism=Escherichia coli, GI87082430, Length=370, Percent_Identity=25.4054054054054, Blast_Score=89, Evalue=6e-19,
Organism=Escherichia coli, GI1788499, Length=377, Percent_Identity=22.8116710875332, Blast_Score=62, Evalue=5e-11,
Organism=Saccharomyces cerevisiae, GI6324356, Length=248, Percent_Identity=29.0322580645161, Blast_Score=92, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003495
- InterPro:   IPR011629 [H]

Pfam domain/function: PF02492 cobW; PF07683 CobW_C [H]

EC number: NA

Molecular weight: Translated: 44515; Mature: 44384

Theoretical pI: Translated: 4.29; Mature: 4.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKRVPVTVLSGYLGAGKTTLLNYILNNKQYLKIAVIVNDMSEVNIDASMVKMGGFSRTE
CCCCCCHHHHHCCCCCCHHHHHHHHHCCCCEEEEEEEEECHHHCCCCHHHHHHCCCCCHH
EKLVALQNGCICCTLREDLIQEVDNLAKLDIDYIVIESSGISEPIPVAQSFIYEDEELKI
HHHHHHCCCCEEEEEHHHHHHHHHHHHHCCEEEEEEECCCCCCCHHHHHHHHCCCCCEEE
NLSDHCCLVTMATVVDANRFWDDYGSGDSLLDRNQEVNENDEREVIDLLIDQIEFANVII
ECCCCCHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHCCEEE
VNKVDLIDTIHMEELMAVLHQLNPEAQIIQSEYGVVPLESILHTRLFDFEKASQGAGWIK
EECHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHH
ELNEEHIPETEEYGISSFVYRRNRPFHPQRWNEWLNNWPNTIIRAKGFFWLASRNNVTGL
HHCHHCCCCCHHCCCHHHHHHCCCCCCHHHHHHHHHHCCCCEEEECCEEEEECCCCHHHH
LSQAGSSLSIQGAGNWVATYPKEEQKSLIKEDPNLLEYWDSKHGDRMNDLVFIGIKMDKQ
HHHCCCEEEEEECCCEEEECCCHHHHHHHHCCCCHHHHHCCCCCCCCCCEEEEEEECCHH
AIMKELDSCLLTDSEMESDWNKLIDPLPAFS
HHHHHHHHHHCCCHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SKRVPVTVLSGYLGAGKTTLLNYILNNKQYLKIAVIVNDMSEVNIDASMVKMGGFSRTE
CCCCCHHHHHCCCCCCHHHHHHHHHCCCCEEEEEEEEECHHHCCCCHHHHHHCCCCCHH
EKLVALQNGCICCTLREDLIQEVDNLAKLDIDYIVIESSGISEPIPVAQSFIYEDEELKI
HHHHHHCCCCEEEEEHHHHHHHHHHHHHCCEEEEEEECCCCCCCHHHHHHHHCCCCCEEE
NLSDHCCLVTMATVVDANRFWDDYGSGDSLLDRNQEVNENDEREVIDLLIDQIEFANVII
ECCCCCHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHCCEEE
VNKVDLIDTIHMEELMAVLHQLNPEAQIIQSEYGVVPLESILHTRLFDFEKASQGAGWIK
EECHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHH
ELNEEHIPETEEYGISSFVYRRNRPFHPQRWNEWLNNWPNTIIRAKGFFWLASRNNVTGL
HHCHHCCCCCHHCCCHHHHHHCCCCCCHHHHHHHHHHCCCCEEEECCEEEEECCCCHHHH
LSQAGSSLSIQGAGNWVATYPKEEQKSLIKEDPNLLEYWDSKHGDRMNDLVFIGIKMDKQ
HHHCCCEEEEEECCCEEEECCCHHHHHHHHCCCCHHHHHCCCCCCCCCCEEEEEEECCHH
AIMKELDSCLLTDSEMESDWNKLIDPLPAFS
HHHHHHHHHHCCCHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377; 9811636 [H]