Click here to switch to the map view.

The map label for this gene is 23100868

Identifier: 23100868

GI number: 23100868

Start: 3551630

End: 3552370

Strand: Reverse

Name: 23100868

Synonym: OB3413

Alternate gene names: NA

Gene position: 3552370-3551630 (Counterclockwise)

Preceding gene: 23100869

Following gene: 23100865

Centisome position: 97.85

GC content: 39.81

Gene sequence:

>741_bases
ATGACATATATGAAAGAGTACTACACAAAGATTATCGAGGCACTGAACACCATTTCCGAAAAAGAAGATAAAGAGATTGC
TAGTGCTGCAAAAAGCATGGCTACTGCTGTAATGAATGGTAACTCGATTTATTTATTTGGAGCATCGCATGCGGGTATCA
TTGCTGAGGATGCGTTTTATCGAGCGGGAGGATTTGCATTATTCAATCCGATCTTCAGCCCTAGCTTGATGTTGAATGTA
GAGCCTGTTACACAGACAAGTAAGCTCGAACGTTTAGAAGGTTACGGAGACATATTGTTAGATTCCAAACCTGTGAAAAA
AGGAGATATCCTCTTTATCCACTCTGTTTCTGGTAGAAATGCCGTAGCTATTGATATGGCATTAACGGCGAAGGAAAGAG
GGATGGGAGTCATCTGCTTAACGAATCTAGAGTATTCGAAGCAAGTTACCTCTCGACACTCGTCAGGATATCGACTGTTT
GAGTTAAGCGATACCGTTATTGATAATGGTGGAGAGCCAGGAGATGCAGTCGTGTCGATTGATTTACTTACGCAAAAAGT
AGCGCCAATTTCTACGATTGTAGGCAGTTATACAATTCATTCGATTGTGCTAAAGATGATAGAAATATTTGAGGAAGCTG
GAACAGATATTCCTATATTCCGAAGCGCGAATATCGATGGTGGAGATGACTATAATTCTCAGCTATTTGAAAAATACAAA
GATCAGATTCATTATATGTGA

Upstream 100 bases:

>100_bases
CATTGCCGATTGGATTGTGATCTTTGGAGGAAATGACTTTTCTCTATGGGCATTTATGACGGATTGGATTGCCAAGTTAT
TCTGATAGGGAGGTGAACGC

Downstream 100 bases:

>100_bases
TAGGGGGGAAGCCAGGGCAGATAGGTGCTCTGGCTTTGTTATATTCGAGAATATAACAATAATATTTTGAATGTGATTGA
ATTTGTATGTCCATCTCTAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 246; Mature: 245

Protein sequence:

>246_residues
MTYMKEYYTKIIEALNTISEKEDKEIASAAKSMATAVMNGNSIYLFGASHAGIIAEDAFYRAGGFALFNPIFSPSLMLNV
EPVTQTSKLERLEGYGDILLDSKPVKKGDILFIHSVSGRNAVAIDMALTAKERGMGVICLTNLEYSKQVTSRHSSGYRLF
ELSDTVIDNGGEPGDAVVSIDLLTQKVAPISTIVGSYTIHSIVLKMIEIFEEAGTDIPIFRSANIDGGDDYNSQLFEKYK
DQIHYM

Sequences:

>Translated_246_residues
MTYMKEYYTKIIEALNTISEKEDKEIASAAKSMATAVMNGNSIYLFGASHAGIIAEDAFYRAGGFALFNPIFSPSLMLNV
EPVTQTSKLERLEGYGDILLDSKPVKKGDILFIHSVSGRNAVAIDMALTAKERGMGVICLTNLEYSKQVTSRHSSGYRLF
ELSDTVIDNGGEPGDAVVSIDLLTQKVAPISTIVGSYTIHSIVLKMIEIFEEAGTDIPIFRSANIDGGDDYNSQLFEKYK
DQIHYM
>Mature_245_residues
TYMKEYYTKIIEALNTISEKEDKEIASAAKSMATAVMNGNSIYLFGASHAGIIAEDAFYRAGGFALFNPIFSPSLMLNVE
PVTQTSKLERLEGYGDILLDSKPVKKGDILFIHSVSGRNAVAIDMALTAKERGMGVICLTNLEYSKQVTSRHSSGYRLFE
LSDTVIDNGGEPGDAVVSIDLLTQKVAPISTIVGSYTIHSIVLKMIEIFEEAGTDIPIFRSANIDGGDDYNSQLFEKYKD
QIHYM

Specific function: Unknown

COG id: COG4821

COG function: function code R; Uncharacterized protein containing SIS (Sugar ISomerase) phosphosugar binding domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SIS domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y3413_OCEIH (Q8EL19)

Other databases:

- EMBL:   BA000028
- RefSeq:   NP_694335.1
- ProteinModelPortal:   Q8EL19
- SMR:   Q8EL19
- GeneID:   1016218
- GenomeReviews:   BA000028_GR
- KEGG:   oih:OB3413
- NMPDR:   fig|221109.1.peg.3417
- HOGENOM:   HBG669261
- OMA:   MLHEGAV
- ProtClustDB:   PRK02947
- BioCyc:   OIHE221109:OB3413-MONOMER
- HAMAP:   MF_01240
- InterPro:   IPR022951

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27020; Mature: 26889

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: PS51464 SIS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTYMKEYYTKIIEALNTISEKEDKEIASAAKSMATAVMNGNSIYLFGASHAGIIAEDAFY
CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHEECCCEEEEEECCCCCEEECCCHH
RAGGFALFNPIFSPSLMLNVEPVTQTSKLERLEGYGDILLDSKPVKKGDILFIHSVSGRN
HCCCHHEEHHCCCCEEEEEECCCCHHHHHHHHCCCCCEEECCCCCCCCCEEEEEECCCCC
AVAIDMALTAKERGMGVICLTNLEYSKQVTSRHSSGYRLFELSDTVIDNGGEPGDAVVSI
EEEEEEEEEHHHCCCEEEEEECCHHHHHHHHCCCCCEEEEEECHHHHCCCCCCCCCEEEE
DLLTQKVAPISTIVGSYTIHSIVLKMIEIFEEAGTDIPIFRSANIDGGDDYNSQLFEKYK
EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHH
DQIHYM
HHHCCC
>Mature Secondary Structure 
TYMKEYYTKIIEALNTISEKEDKEIASAAKSMATAVMNGNSIYLFGASHAGIIAEDAFY
CHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHEECCCEEEEEECCCCCEEECCCHH
RAGGFALFNPIFSPSLMLNVEPVTQTSKLERLEGYGDILLDSKPVKKGDILFIHSVSGRN
HCCCHHEEHHCCCCEEEEEECCCCHHHHHHHHCCCCCEEECCCCCCCCCEEEEEECCCCC
AVAIDMALTAKERGMGVICLTNLEYSKQVTSRHSSGYRLFELSDTVIDNGGEPGDAVVSI
EEEEEEEEEHHHCCCEEEEEECCHHHHHHHHCCCCCEEEEEECHHHHCCCCCCCCCEEEE
DLLTQKVAPISTIVGSYTIHSIVLKMIEIFEEAGTDIPIFRSANIDGGDDYNSQLFEKYK
EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHH
DQIHYM
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12235376