| Definition | Oceanobacillus iheyensis HTE831, complete genome. |
|---|---|
| Accession | NC_004193 |
| Length | 3,630,528 |
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The map label for this gene is yeiH [C]
Identifier: 23100861
GI number: 23100861
Start: 3542164
End: 3543186
Strand: Reverse
Name: yeiH [C]
Synonym: OB3406
Alternate gene names: 23100861
Gene position: 3543186-3542164 (Counterclockwise)
Preceding gene: 23100865
Following gene: 23100851
Centisome position: 97.59
GC content: 41.74
Gene sequence:
>1023_bases ATGCAGCATGTACATCCAGACGATAAGACACGATCCTTTTATACAGGAATAGGGATTACCCTAGCAATTGCCCTAGTGGC GGGGGTACTTTGCAAGATTCCCTATCTTGATATTATGGGACAACTTGTTCTAGCGATTATGATCGGAATGATATGGGGAC ATACGATTGGGTTGAAGAATTCACATCGATCTGGCGTCCAGTTTTCCAGTAAAAAGCTGTTAAGGGCAGGAATTATATTA TTAGGATTGCGACTCAATCTATCAGCCATGTATGATGCGGGCTTACATGCGTTTTTATATGCAGGATTGCTGTTAACGGT TGCTTTGGTGACTGTCTATAGCTTGGCTAGATTGTTTCGTGTAAATAAGACATTAAGTATCTTGACGGCTTGTGGAACAG CAATATGTGGAGCTGCTGCGATTGTTGCGATTGCCCCTTTAGTAAAAGCGAAAGAAAGCACGACAGCAGTCAGTGTCGCT GTTATTGCAGTGCTTGGAACGATGTTTACACTAATCTATACAATGATGTATCCTTTTTTACCGTTTACCGATTATCAGTA CGGGATTTTTGCGGGAGGAACATTGCATGAAATTGCCCATGCAGTCGCTGCTTCCACTGCCGGTGGAGAAGAAGCGGAGA ATATTGCTATTGTGGTAAAGCTGACGAGAGTTGCCTTACTTGTTCCGGTGGCTATTTTGATCGGTATCTATATGAAGAAA AGAGAACCTCAAAACAATAAGCAGCGTTTTTCGTTAAAAACACTCCCGATTCCCTGGTTTATATTTGGTTTTCTTGCCAT GAGCGCGGTGAATACAATCGGATTCTTACCTGAAAGTGTCGTGAATTTGCTTATTTCGCTAGCGTATCTGCTGTTAAGTA TGGCAATGGCTGGTTTGGGGTTAAATGTAGAGTTTCAAGCCTTTAAGAAGTTCGGATTCCATGTATTTTTTGCAGGATTA TTAGGAACATTGATTTTAATCGGATGCGGATTCGGTTTGATCTATGTGATGGGTTTAGGATAG
Upstream 100 bases:
>100_bases TTTTATTAACTTTTTTAATAAGTATTATTATATATATTTATTTCAAAAATAAAAGCGCTCAGCCTATACTAATTATAGAT AGAGAAGGAGGCACAACAAC
Downstream 100 bases:
>100_bases GCATGAGGGAGAGTTTGTTTAATAGAAAGCGGAGTTTACTTGAGATGTGTATCCAAATTAATAACCGAGCTATGTTTAGT TCATAGCTCAGTTATTCTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 340; Mature: 340
Protein sequence:
>340_residues MQHVHPDDKTRSFYTGIGITLAIALVAGVLCKIPYLDIMGQLVLAIMIGMIWGHTIGLKNSHRSGVQFSSKKLLRAGIIL LGLRLNLSAMYDAGLHAFLYAGLLLTVALVTVYSLARLFRVNKTLSILTACGTAICGAAAIVAIAPLVKAKESTTAVSVA VIAVLGTMFTLIYTMMYPFLPFTDYQYGIFAGGTLHEIAHAVAASTAGGEEAENIAIVVKLTRVALLVPVAILIGIYMKK REPQNNKQRFSLKTLPIPWFIFGFLAMSAVNTIGFLPESVVNLLISLAYLLLSMAMAGLGLNVEFQAFKKFGFHVFFAGL LGTLILIGCGFGLIYVMGLG
Sequences:
>Translated_340_residues MQHVHPDDKTRSFYTGIGITLAIALVAGVLCKIPYLDIMGQLVLAIMIGMIWGHTIGLKNSHRSGVQFSSKKLLRAGIIL LGLRLNLSAMYDAGLHAFLYAGLLLTVALVTVYSLARLFRVNKTLSILTACGTAICGAAAIVAIAPLVKAKESTTAVSVA VIAVLGTMFTLIYTMMYPFLPFTDYQYGIFAGGTLHEIAHAVAASTAGGEEAENIAIVVKLTRVALLVPVAILIGIYMKK REPQNNKQRFSLKTLPIPWFIFGFLAMSAVNTIGFLPESVVNLLISLAYLLLSMAMAGLGLNVEFQAFKKFGFHVFFAGL LGTLILIGCGFGLIYVMGLG >Mature_340_residues MQHVHPDDKTRSFYTGIGITLAIALVAGVLCKIPYLDIMGQLVLAIMIGMIWGHTIGLKNSHRSGVQFSSKKLLRAGIIL LGLRLNLSAMYDAGLHAFLYAGLLLTVALVTVYSLARLFRVNKTLSILTACGTAICGAAAIVAIAPLVKAKESTTAVSVA VIAVLGTMFTLIYTMMYPFLPFTDYQYGIFAGGTLHEIAHAVAASTAGGEEAENIAIVVKLTRVALLVPVAILIGIYMKK REPQNNKQRFSLKTLPIPWFIFGFLAMSAVNTIGFLPESVVNLLISLAYLLLSMAMAGLGLNVEFQAFKKFGFHVFFAGL LGTLILIGCGFGLIYVMGLG
Specific function: Unknown
COG id: COG2855
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0324 family
Homologues:
Organism=Escherichia coli, GI1788482, Length=276, Percent_Identity=38.4057971014493, Blast_Score=169, Evalue=2e-43,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y3406_OCEIH (Q8EL25)
Other databases:
- EMBL: BA000028 - RefSeq: NP_694328.1 - GeneID: 1018536 - GenomeReviews: BA000028_GR - KEGG: oih:OB3406 - NMPDR: fig|221109.1.peg.3410 - HOGENOM: HBG669767 - OMA: AFEDEMA - BioCyc: OIHE221109:OB3406-MONOMER - InterPro: IPR018383
Pfam domain/function: PF03601 Cons_hypoth698
EC number: NA
Molecular weight: Translated: 36466; Mature: 36466
Theoretical pI: Translated: 9.89; Mature: 9.89
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x118aae7c)-; HASH(0x124dec60)-; HASH(0x11b20618)-; HASH(0xd734770)-; HASH(0x1214d6e4)-; HASH(0x11dff0a0)-; HASH(0x1204e538)-; HASH(0x119aeec4)-; HASH(0x12060738)-;
Cys/Met content:
1.2 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQHVHPDDKTRSFYTGIGITLAIALVAGVLCKIPYLDIMGQLVLAIMIGMIWGHTIGLKN CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCC SHRSGVQFSSKKLLRAGIILLGLRLNLSAMYDAGLHAFLYAGLLLTVALVTVYSLARLFR CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VNKTLSILTACGTAICGAAAIVAIAPLVKAKESTTAVSVAVIAVLGTMFTLIYTMMYPFL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC PFTDYQYGIFAGGTLHEIAHAVAASTAGGEEAENIAIVVKLTRVALLVPVAILIGIYMKK CCCCCCCCEECCCHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHC REPQNNKQRFSLKTLPIPWFIFGFLAMSAVNTIGFLPESVVNLLISLAYLLLSMAMAGLG CCCCCCHHHEEEECCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCC LNVEFQAFKKFGFHVFFAGLLGTLILIGCGFGLIYVMGLG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH >Mature Secondary Structure MQHVHPDDKTRSFYTGIGITLAIALVAGVLCKIPYLDIMGQLVLAIMIGMIWGHTIGLKN CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCC SHRSGVQFSSKKLLRAGIILLGLRLNLSAMYDAGLHAFLYAGLLLTVALVTVYSLARLFR CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VNKTLSILTACGTAICGAAAIVAIAPLVKAKESTTAVSVAVIAVLGTMFTLIYTMMYPFL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC PFTDYQYGIFAGGTLHEIAHAVAASTAGGEEAENIAIVVKLTRVALLVPVAILIGIYMKK CCCCCCCCEECCCHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHC REPQNNKQRFSLKTLPIPWFIFGFLAMSAVNTIGFLPESVVNLLISLAYLLLSMAMAGLG CCCCCCHHHEEEECCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCC LNVEFQAFKKFGFHVFFAGLLGTLILIGCGFGLIYVMGLG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12235376