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The map label for this gene is allC [C]

Identifier: 23100741

GI number: 23100741

Start: 3424605

End: 3425837

Strand: Reverse

Name: allC [C]

Synonym: OB3286

Alternate gene names: 23100741

Gene position: 3425837-3424605 (Counterclockwise)

Preceding gene: 23100742

Following gene: 23100740

Centisome position: 94.36

GC content: 39.98

Gene sequence:

>1233_bases
TTGGAAGATTGGCTAGACAAAAAATTATGTGAATTGAATGTAACCGATTCGATGAATAAGCCTGAAGGTTTTTCGCGTCT
AGGCTATACCGACGAAGAAAAGGTTGCGCATCAACGATTTATAACTATAGCGAAAGAACTTGGTTTGTCTACATATCAAG
ATCAAGCTGGTAATCAATGGGCAAAATGGGTTGTAGACGAACATGCTCCGACTATTGGCCTTGGGTCACATTTAGATACC
GTCTATAACGGAGGCGGCTTTGACGGAGTTGCAGGAGTACTTACTGCATTCGGTGCCATAAAGTTATTAAAAGAAAAACA
ATTCATCCCAAAGAAAAATATTGCGATTATTTGTTTTGCATCCGAGGAGTCTGCGAGATTTGGCGTATCCACGATAGGGA
GCAAGGCGATATCAGGAGAATTAGAAAAAGAAAAGATTGCTAACATCAAAGATAGTGAAGGGATTACCATTAAAGAAGCG
GTCGAGCAGTTTGGAGTAGATTGGGAGACAATGGATAGCGCGGAACTACCTGCAGATGAGTTAGAGCAATTCTTGGAGCT
TCATATTGAACAAGGTAAAGTCCTTGAAGATCAAGGATTAGATATCGGTATTGTCAATGGAATAGCTCGACCAGTTCGAC
TTCAGGTAAAGGCAACAGGGATGGCCAATCACACAGGAACAACTCCGATGAACTATAGAAAAGATGCGCTTGTTGCCATC
GCCCCGTTAATTAATTATGTAGAGAATGAAGCGATAAAGATCAATGAAAGAAAAAGCGGAACACTTGTAGCCACTGTCAG
TGTTGCTCGTGTATTACCAAATGCGATGAATATGATTCCTGGAGAAATTGAACTAGGCATAGATATACGTAGTACAAACG
ACCAGTTAAAAAATGAAATGTCAGAATTGATAAATAAATATTGCGGGAAGATTACGGAAGATAAAAAGATAGAAGTCACA
GTCAATAAAATCGTTGATGATGCATCGGTTAACCTGGATAAGCTAATGCAGGGTAAATTGTATAAGTTAAGTGAATCGAT
GGGCCTTAGGACGATATGTATGGATAGTGGTGCCGGCCACGATGTGATGAATATGGCAAGTAAATGGCCATGCGGTCTTA
TTTTTATTCCTTCGAAACACGGCATTAGCCATCATCCAGAGGAATATACGAAAACAGCGGATTTATACAAAGGAACAAGC
CTCATCGCAAGATATTTAGAACAAGAAGCATAA

Upstream 100 bases:

>100_bases
TAGACCGAAGAATGTGTATTGTTTTGTTGAGCATGCATTGGTAAATGCTTCACAAGAATAACGATTGCTAATTATTACAG
CGAGATGTGGGGGGAGTCTT

Downstream 100 bases:

>100_bases
ATTGGAGGGGTATGATGAAGGAGTTTGTTGAAGATTATTTAAGAAAACATCAAGCGTATTTTACAAAGGTCTCAGAATAT
GTCTTTAATCACCCGGAAAC

Product: allantoate amidohydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 410; Mature: 410

Protein sequence:

>410_residues
MEDWLDKKLCELNVTDSMNKPEGFSRLGYTDEEKVAHQRFITIAKELGLSTYQDQAGNQWAKWVVDEHAPTIGLGSHLDT
VYNGGGFDGVAGVLTAFGAIKLLKEKQFIPKKNIAIICFASEESARFGVSTIGSKAISGELEKEKIANIKDSEGITIKEA
VEQFGVDWETMDSAELPADELEQFLELHIEQGKVLEDQGLDIGIVNGIARPVRLQVKATGMANHTGTTPMNYRKDALVAI
APLINYVENEAIKINERKSGTLVATVSVARVLPNAMNMIPGEIELGIDIRSTNDQLKNEMSELINKYCGKITEDKKIEVT
VNKIVDDASVNLDKLMQGKLYKLSESMGLRTICMDSGAGHDVMNMASKWPCGLIFIPSKHGISHHPEEYTKTADLYKGTS
LIARYLEQEA

Sequences:

>Translated_410_residues
MEDWLDKKLCELNVTDSMNKPEGFSRLGYTDEEKVAHQRFITIAKELGLSTYQDQAGNQWAKWVVDEHAPTIGLGSHLDT
VYNGGGFDGVAGVLTAFGAIKLLKEKQFIPKKNIAIICFASEESARFGVSTIGSKAISGELEKEKIANIKDSEGITIKEA
VEQFGVDWETMDSAELPADELEQFLELHIEQGKVLEDQGLDIGIVNGIARPVRLQVKATGMANHTGTTPMNYRKDALVAI
APLINYVENEAIKINERKSGTLVATVSVARVLPNAMNMIPGEIELGIDIRSTNDQLKNEMSELINKYCGKITEDKKIEVT
VNKIVDDASVNLDKLMQGKLYKLSESMGLRTICMDSGAGHDVMNMASKWPCGLIFIPSKHGISHHPEEYTKTADLYKGTS
LIARYLEQEA
>Mature_410_residues
MEDWLDKKLCELNVTDSMNKPEGFSRLGYTDEEKVAHQRFITIAKELGLSTYQDQAGNQWAKWVVDEHAPTIGLGSHLDT
VYNGGGFDGVAGVLTAFGAIKLLKEKQFIPKKNIAIICFASEESARFGVSTIGSKAISGELEKEKIANIKDSEGITIKEA
VEQFGVDWETMDSAELPADELEQFLELHIEQGKVLEDQGLDIGIVNGIARPVRLQVKATGMANHTGTTPMNYRKDALVAI
APLINYVENEAIKINERKSGTLVATVSVARVLPNAMNMIPGEIELGIDIRSTNDQLKNEMSELINKYCGKITEDKKIEVT
VNKIVDDASVNLDKLMQGKLYKLSESMGLRTICMDSGAGHDVMNMASKWPCGLIFIPSKHGISHHPEEYTKTADLYKGTS
LIARYLEQEA

Specific function: Involved In The Anaerobic Utilization Of Allantoin. Converts Allantoate To (S)-Ureidoglycolate And Ammonia. [C]

COG id: COG0624

COG function: function code E; Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M20 family [H]

Homologues:

Organism=Escherichia coli, GI1786726, Length=390, Percent_Identity=34.6153846153846, Blast_Score=218, Evalue=8e-58,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010158
- InterPro:   IPR001261
- InterPro:   IPR002933
- InterPro:   IPR011650 [H]

Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]

EC number: 3.5.3.- [C]

Molecular weight: Translated: 45179; Mature: 45179

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: PS00758 ARGE_DAPE_CPG2_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEDWLDKKLCELNVTDSMNKPEGFSRLGYTDEEKVAHQRFITIAKELGLSTYQDQAGNQW
CCHHHHHHHHEEECCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHCCCHH
AKWVVDEHAPTIGLGSHLDTVYNGGGFDGVAGVLTAFGAIKLLKEKQFIPKKNIAIICFA
HHHHHHCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEE
SEESARFGVSTIGSKAISGELEKEKIANIKDSEGITIKEAVEQFGVDWETMDSAELPADE
CCCCCCCCHHHHCCHHHCCCCCHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHH
LEQFLELHIEQGKVLEDQGLDIGIVNGIARPVRLQVKATGMANHTGTTPMNYRKDALVAI
HHHHHHHHHHCCCEECCCCCCEEEHHCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHH
APLINYVENEAIKINERKSGTLVATVSVARVLPNAMNMIPGEIELGIDIRSTNDQLKNEM
HHHHHHHCCCCEEEECCCCCCEEEEHHHHHHHHHHHHCCCCCEEEEEEEECCHHHHHHHH
SELINKYCGKITEDKKIEVTVNKIVDDASVNLDKLMQGKLYKLSESMGLRTICMDSGAGH
HHHHHHHHCCCCCCCEEEEEHHHHHCCCCCCHHHHHCCHHHHHHHHCCCEEEEECCCCCH
DVMNMASKWPCGLIFIPSKHGISHHPEEYTKTADLYKGTSLIARYLEQEA
HHHHHHHCCCCCEEEECCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHCC
>Mature Secondary Structure
MEDWLDKKLCELNVTDSMNKPEGFSRLGYTDEEKVAHQRFITIAKELGLSTYQDQAGNQW
CCHHHHHHHHEEECCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHCCCHH
AKWVVDEHAPTIGLGSHLDTVYNGGGFDGVAGVLTAFGAIKLLKEKQFIPKKNIAIICFA
HHHHHHCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEE
SEESARFGVSTIGSKAISGELEKEKIANIKDSEGITIKEAVEQFGVDWETMDSAELPADE
CCCCCCCCHHHHCCHHHCCCCCHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHH
LEQFLELHIEQGKVLEDQGLDIGIVNGIARPVRLQVKATGMANHTGTTPMNYRKDALVAI
HHHHHHHHHHCCCEECCCCCCEEEHHCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHH
APLINYVENEAIKINERKSGTLVATVSVARVLPNAMNMIPGEIELGIDIRSTNDQLKNEM
HHHHHHHCCCCEEEECCCCCCEEEEHHHHHHHHHHHHCCCCCEEEEEEEECCHHHHHHHH
SELINKYCGKITEDKKIEVTVNKIVDDASVNLDKLMQGKLYKLSESMGLRTICMDSGAGH
HHHHHHHHCCCCCCCEEEEEHHHHHCCCCCCHHHHHCCHHHHHHHHCCCEEEEECCCCCH
DVMNMASKWPCGLIFIPSKHGISHHPEEYTKTADLYKGTSLIARYLEQEA
HHHHHHHCCCCCEEEECCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]