Click here to switch to the map view.

The map label for this gene is abgB [H]

Identifier: 23100740

GI number: 23100740

Start: 3423154

End: 3424590

Strand: Reverse

Name: abgB [H]

Synonym: OB3285

Alternate gene names: 23100740

Gene position: 3424590-3423154 (Counterclockwise)

Preceding gene: 23100741

Following gene: 23100739

Centisome position: 94.33

GC content: 41.96

Gene sequence:

>1437_bases
ATGAAGGAGTTTGTTGAAGATTATTTAAGAAAACATCAAGCGTATTTTACAAAGGTCTCAGAATATGTCTTTAATCACCC
GGAAACTCGATTTGAAGAATATGAATCGTCTTCTTATTTAGCTAATGAATGTGAAAAGCAAGGATTTACCGTCACTAGAA
ATGTCGCGGGTATTGATACTGCATTTGTCGCTACTTACGGATCTGGAAAACCGGTAATTGGATTCTTAGGAGAATTTGAT
GCGCTATCTGGATTAAGCCAACAGGCGGGAGAGACGCAGTACCAACCTTTAGAGAATGATGTTGGTCATGGATGCGGTCA
TAACTTATTAGGTACAGGCTCTTTTGCTGCTGCCTGTGCAGTGAAGTGTTATTTAGAAGAACATCAATTACCTGGTACAG
TTACATTCTTTGGTTGTCCCGGAGAGGAAGGCGGTTCTGGTAAAACGTTTATGGTGCGAGAAGGTGTGTTTGATGAGGTG
GATATTGCTCTGACTTGGCACCCGTCTCCATCGAATTCCATCATGAATCGCCCGACACTGGCAAACTATCAAGTGTTATT
TAAGTTTAAAGGTACCGCAGCACATGCGGCTAATTCTCCTCATTTAGGGAGAAGTGCATTAGATGCAGTCGAGCTGATGA
ATGTAGGTGTGAATTATTTACGGGAGCACGTAGTAGATGATGCGCGTATTCACTATGCAGTAACAAATACAGGCGGGATT
TCACCAAACGTCGTACAGTCTCATGCAGAAGTATTGTATCTTGTTCGGGCTGCAAAAGTAGAACAAGCAGAAAATATTTA
CCAGCGCGTACACAGAATTGCTCAGGGTGCTGCACTAATGACGGATACAAAGCTCACGGTTGAATTTGATAAGGCTTGTT
CGAACTATATTCCCAATCGAAATCTAGAGGAAATCATGCATAATTACTTGCGCGATATAAAGATAGAACCGCTTACGGAA
GAAGAAGAAGTTTTTGCTAAAGCAATTTCAGATACGTTAACGGATGAAGAAAGAGATTTTACGGTGGACTTAATGAAGGG
CTTTGGTTATGAAGGGGACGGAAGTGAGTTGGAAGGTAAATACGTATCCGATAGTGTGTCAGATTACCACGCAACAGAAG
AGTTGTTGCATGGTTCTACGGATGTTGCCGATGTCAGCTGGGTTGTCCCCACTGCACAATTAACAACAGCTACATCCGTA
TTGGGTACACCTCTGCACACTTGGCAAATGACAACTCAAGGGCTAAGCAGTATCGCCAACAAAGGGATGCTACGTGCAGC
CAGTACGATGGCGTTGACTGGTTTAGATATGTTGATTCATGAGGAAAGATTTCAAAAGGTACAAAAAGAATTTACCGCAT
TTAAGGAAAAAAATCCATATACCTGTCCGATTCCAACGGATGTAAAACCATCTACACTAAGCGGAAAAGCAATTTAA

Upstream 100 bases:

>100_bases
GCCATCATCCAGAGGAATATACGAAAACAGCGGATTTATACAAAGGAACAAGCCTCATCGCAAGATATTTAGAACAAGAA
GCATAAATTGGAGGGGTATG

Downstream 100 bases:

>100_bases
GGAGAGTGATGAAATGAAGAAAAAAGGAGTATTTCAGAGATTTCTTGATGTTGTAGAAAAAGTAGGGAATAAATTACCTG
ATCCATTCATGCTATTTCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 478; Mature: 478

Protein sequence:

>478_residues
MKEFVEDYLRKHQAYFTKVSEYVFNHPETRFEEYESSSYLANECEKQGFTVTRNVAGIDTAFVATYGSGKPVIGFLGEFD
ALSGLSQQAGETQYQPLENDVGHGCGHNLLGTGSFAAACAVKCYLEEHQLPGTVTFFGCPGEEGGSGKTFMVREGVFDEV
DIALTWHPSPSNSIMNRPTLANYQVLFKFKGTAAHAANSPHLGRSALDAVELMNVGVNYLREHVVDDARIHYAVTNTGGI
SPNVVQSHAEVLYLVRAAKVEQAENIYQRVHRIAQGAALMTDTKLTVEFDKACSNYIPNRNLEEIMHNYLRDIKIEPLTE
EEEVFAKAISDTLTDEERDFTVDLMKGFGYEGDGSELEGKYVSDSVSDYHATEELLHGSTDVADVSWVVPTAQLTTATSV
LGTPLHTWQMTTQGLSSIANKGMLRAASTMALTGLDMLIHEERFQKVQKEFTAFKEKNPYTCPIPTDVKPSTLSGKAI

Sequences:

>Translated_478_residues
MKEFVEDYLRKHQAYFTKVSEYVFNHPETRFEEYESSSYLANECEKQGFTVTRNVAGIDTAFVATYGSGKPVIGFLGEFD
ALSGLSQQAGETQYQPLENDVGHGCGHNLLGTGSFAAACAVKCYLEEHQLPGTVTFFGCPGEEGGSGKTFMVREGVFDEV
DIALTWHPSPSNSIMNRPTLANYQVLFKFKGTAAHAANSPHLGRSALDAVELMNVGVNYLREHVVDDARIHYAVTNTGGI
SPNVVQSHAEVLYLVRAAKVEQAENIYQRVHRIAQGAALMTDTKLTVEFDKACSNYIPNRNLEEIMHNYLRDIKIEPLTE
EEEVFAKAISDTLTDEERDFTVDLMKGFGYEGDGSELEGKYVSDSVSDYHATEELLHGSTDVADVSWVVPTAQLTTATSV
LGTPLHTWQMTTQGLSSIANKGMLRAASTMALTGLDMLIHEERFQKVQKEFTAFKEKNPYTCPIPTDVKPSTLSGKAI
>Mature_478_residues
MKEFVEDYLRKHQAYFTKVSEYVFNHPETRFEEYESSSYLANECEKQGFTVTRNVAGIDTAFVATYGSGKPVIGFLGEFD
ALSGLSQQAGETQYQPLENDVGHGCGHNLLGTGSFAAACAVKCYLEEHQLPGTVTFFGCPGEEGGSGKTFMVREGVFDEV
DIALTWHPSPSNSIMNRPTLANYQVLFKFKGTAAHAANSPHLGRSALDAVELMNVGVNYLREHVVDDARIHYAVTNTGGI
SPNVVQSHAEVLYLVRAAKVEQAENIYQRVHRIAQGAALMTDTKLTVEFDKACSNYIPNRNLEEIMHNYLRDIKIEPLTE
EEEVFAKAISDTLTDEERDFTVDLMKGFGYEGDGSELEGKYVSDSVSDYHATEELLHGSTDVADVSWVVPTAQLTTATSV
LGTPLHTWQMTTQGLSSIANKGMLRAASTMALTGLDMLIHEERFQKVQKEFTAFKEKNPYTCPIPTDVKPSTLSGKAI

Specific function: Required but not essential for aminobenzoyl-glutamate utilization. May participate in hydrolysis of aminobenzoyl- glutamate to aminobenzoate, either alone or in combination with AbgA [H]

COG id: COG1473

COG function: function code R; Metal-dependent amidase/aminoacylase/carboxypeptidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI58082085, Length=454, Percent_Identity=26.6519823788546, Blast_Score=132, Evalue=8e-31,
Organism=Escherichia coli, GI1787598, Length=478, Percent_Identity=52.928870292887, Blast_Score=503, Evalue=1e-143,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017145
- InterPro:   IPR010168
- InterPro:   IPR002933
- InterPro:   IPR011650 [H]

Pfam domain/function: PF01546 Peptidase_M20 [H]

EC number: NA

Molecular weight: Translated: 52709; Mature: 52709

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEFVEDYLRKHQAYFTKVSEYVFNHPETRFEEYESSSYLANECEKQGFTVTRNVAGIDT
CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHCCCEEEECCCCCCE
AFVATYGSGKPVIGFLGEFDALSGLSQQAGETQYQPLENDVGHGCGHNLLGTGSFAAACA
EEEEEECCCCCEEECCCCHHHHHCCHHHCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHH
VKCYLEEHQLPGTVTFFGCPGEEGGSGKTFMVREGVFDEVDIALTWHPSPSNSIMNRPTL
HHHHHHHCCCCCEEEEEECCCCCCCCCCEEEEECCCCCCEEEEEEECCCCCCCCCCCCCC
ANYQVLFKFKGTAAHAANSPHLGRSALDAVELMNVGVNYLREHVVDDARIHYAVTNTGGI
CCEEEEEEECCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCC
SPNVVQSHAEVLYLVRAAKVEQAENIYQRVHRIAQGAALMTDTKLTVEFDKACSNYIPNR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCEEEEEEHHHHHHCCCCC
NLEEIMHNYLRDIKIEPLTEEEEVFAKAISDTLTDEERDFTVDLMKGFGYEGDGSELEGK
CHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEHHHHHCCCCCCCCCCCCCC
YVSDSVSDYHATEELLHGSTDVADVSWVVPTAQLTTATSVLGTPLHTWQMTTQGLSSIAN
CCCCCHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
KGMLRAASTMALTGLDMLIHEERFQKVQKEFTAFKEKNPYTCPIPTDVKPSTLSGKAI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKEFVEDYLRKHQAYFTKVSEYVFNHPETRFEEYESSSYLANECEKQGFTVTRNVAGIDT
CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHCCCEEEECCCCCCE
AFVATYGSGKPVIGFLGEFDALSGLSQQAGETQYQPLENDVGHGCGHNLLGTGSFAAACA
EEEEEECCCCCEEECCCCHHHHHCCHHHCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHH
VKCYLEEHQLPGTVTFFGCPGEEGGSGKTFMVREGVFDEVDIALTWHPSPSNSIMNRPTL
HHHHHHHCCCCCEEEEEECCCCCCCCCCEEEEECCCCCCEEEEEEECCCCCCCCCCCCCC
ANYQVLFKFKGTAAHAANSPHLGRSALDAVELMNVGVNYLREHVVDDARIHYAVTNTGGI
CCEEEEEEECCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCC
SPNVVQSHAEVLYLVRAAKVEQAENIYQRVHRIAQGAALMTDTKLTVEFDKACSNYIPNR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCEEEEEEHHHHHHCCCCC
NLEEIMHNYLRDIKIEPLTEEEEVFAKAISDTLTDEERDFTVDLMKGFGYEGDGSELEGK
CHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEHHHHHCCCCCCCCCCCCCC
YVSDSVSDYHATEELLHGSTDVADVSWVVPTAQLTTATSVLGTPLHTWQMTTQGLSSIAN
CCCCCHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
KGMLRAASTMALTGLDMLIHEERFQKVQKEFTAFKEKNPYTCPIPTDVKPSTLSGKAI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503; 9829935 [H]