| Definition | Oceanobacillus iheyensis HTE831, complete genome. |
|---|---|
| Accession | NC_004193 |
| Length | 3,630,528 |
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The map label for this gene is yurO [H]
Identifier: 23100025
GI number: 23100025
Start: 2628218
End: 2629516
Strand: Reverse
Name: yurO [H]
Synonym: OB2570
Alternate gene names: 23100025
Gene position: 2629516-2628218 (Counterclockwise)
Preceding gene: 23100026
Following gene: 23100024
Centisome position: 72.43
GC content: 36.1
Gene sequence:
>1299_bases ATGAAAAGAAACAAATTGTTTCTTACAAAAGGGTTTATTGCAATTATGTTAGTTGCTGTACTTATTATTGCTGGTTGTTC TTCTGGTGATGAAAATGAAGAATCAGCAGATGGAAAAACGGTAGTAGATATTTTCCAGTTTAAAGTAGAATTTAAAGAAC AATTTGAAGAAATTGTTAAACAATATGAAGAAGAAAACCCAGACGTGAAAATTGATGTACAAACAGTAGGTGGAGGTAAT GATTATGCTGCTTCACTTAAATCTTCATTTGCTGCGGGTAACGAACCTGCCATTTTCAATGTTGGGGGACCAACGGAAGT AGAAGAATATCGTGACTATTTAACAGATCTTTCTGATACAAAAGCGGCCGAAGCAGCATTAGAAGGCACATTAACAGGTG TAATGGAAGATGATAAAGTATTAGGATTACCATATAGCCAAGAAGGTTATGGATATATTTATAATAAAGAAATTTTTGAA CAAGCTGGTATTAATCCAGAAGAACTTACTACTTATGAAGCTTTAGAGGAAGCATTTGCTACAATTGATAGCCAAAAAGA AGATCTAGGACTTGAAGCAGTAATGGCATTACCTGCCAAAGAGTTGTGGGTAATGGGGAATCACTTAGCAAATACGTATA TTGCTCCAGATTTTAATAATGACATCATGGAAGCATATGAAGCTTCAACAATTCCTTTCTCTAAAGCGGATGAATTACAA CGTATGCTAGATTTACAGAATGAATATTCAGTACAACCTGTACTGAGCTTAGATTATTCTCAACAAGTAGAACAATTATT CTCTACAGGTAAAGTAGCTGTTATTCAACAAGGTAATTGGATTTATCCAACTGTCGAGCAAATGGATGCAGAATTTGCCG AAAACAATATCGGAATGATTCCAATTCCTGTTGATGGCATGGAAGGCCAATTACCAGTAGGTGTTCCTCAGTATTGGGTA GTAAATAGTCAAAAAGGTGAAGAAGTACAACAAGCTGCAAAAGATTTTCTGGACTGGTTATATACATCTGACGCTGGTAA AGACTTCGTACTAGATGAATTTAAATTTATCCCAGCATATGAAGGTTATGATACAGAACGTATTGCAGATCCTCTTTCTC AAGAAGTTTATCGTTATTCTCAAGAAGGTGACACTATTGGGTGGGTCTTTATGGCATCGCCTGTAGGTTGGCAAGAAGAT ACGATGGCAGTAAATATGCAACGTTATTTAAGTGGCGACATTTCATGGGAAGAAGTAATTGAGCAATCAGCTGCAGATTG GGAAAACGCTAGACAGTAA
Upstream 100 bases:
>100_bases ATGCTAGGACATAAATTATATGTCCTATATTAATAGAAAACTATGAAAGCGCTATAGATTTTTCATAGTCTTCTAAAAAA TATTAATAGGGGTGGGGTTC
Downstream 100 bases:
>100_bases CTTATAGTGAGGTTGGGACAAAAATAGTTACTCAAAAAACAAATTAGAATGAATTGGTGATGAGAGCCTGTTTCACAGAG ATGCTTTGCTAAGACAACTC
Product: multiple sugar-binding transport system multiple sugar-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 432; Mature: 432
Protein sequence:
>432_residues MKRNKLFLTKGFIAIMLVAVLIIAGCSSGDENEESADGKTVVDIFQFKVEFKEQFEEIVKQYEEENPDVKIDVQTVGGGN DYAASLKSSFAAGNEPAIFNVGGPTEVEEYRDYLTDLSDTKAAEAALEGTLTGVMEDDKVLGLPYSQEGYGYIYNKEIFE QAGINPEELTTYEALEEAFATIDSQKEDLGLEAVMALPAKELWVMGNHLANTYIAPDFNNDIMEAYEASTIPFSKADELQ RMLDLQNEYSVQPVLSLDYSQQVEQLFSTGKVAVIQQGNWIYPTVEQMDAEFAENNIGMIPIPVDGMEGQLPVGVPQYWV VNSQKGEEVQQAAKDFLDWLYTSDAGKDFVLDEFKFIPAYEGYDTERIADPLSQEVYRYSQEGDTIGWVFMASPVGWQED TMAVNMQRYLSGDISWEEVIEQSAADWENARQ
Sequences:
>Translated_432_residues MKRNKLFLTKGFIAIMLVAVLIIAGCSSGDENEESADGKTVVDIFQFKVEFKEQFEEIVKQYEEENPDVKIDVQTVGGGN DYAASLKSSFAAGNEPAIFNVGGPTEVEEYRDYLTDLSDTKAAEAALEGTLTGVMEDDKVLGLPYSQEGYGYIYNKEIFE QAGINPEELTTYEALEEAFATIDSQKEDLGLEAVMALPAKELWVMGNHLANTYIAPDFNNDIMEAYEASTIPFSKADELQ RMLDLQNEYSVQPVLSLDYSQQVEQLFSTGKVAVIQQGNWIYPTVEQMDAEFAENNIGMIPIPVDGMEGQLPVGVPQYWV VNSQKGEEVQQAAKDFLDWLYTSDAGKDFVLDEFKFIPAYEGYDTERIADPLSQEVYRYSQEGDTIGWVFMASPVGWQED TMAVNMQRYLSGDISWEEVIEQSAADWENARQ >Mature_432_residues MKRNKLFLTKGFIAIMLVAVLIIAGCSSGDENEESADGKTVVDIFQFKVEFKEQFEEIVKQYEEENPDVKIDVQTVGGGN DYAASLKSSFAAGNEPAIFNVGGPTEVEEYRDYLTDLSDTKAAEAALEGTLTGVMEDDKVLGLPYSQEGYGYIYNKEIFE QAGINPEELTTYEALEEAFATIDSQKEDLGLEAVMALPAKELWVMGNHLANTYIAPDFNNDIMEAYEASTIPFSKADELQ RMLDLQNEYSVQPVLSLDYSQQVEQLFSTGKVAVIQQGNWIYPTVEQMDAEFAENNIGMIPIPVDGMEGQLPVGVPQYWV VNSQKGEEVQQAAKDFLDWLYTSDAGKDFVLDEFKFIPAYEGYDTERIADPLSQEVYRYSQEGDTIGWVFMASPVGWQED TMAVNMQRYLSGDISWEEVIEQSAADWENARQ
Specific function: Probably part of the binding-protein-dependent transport system yurMNO [H]
COG id: COG1653
COG function: function code G; ABC-type sugar transport system, periplasmic component
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 1 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006059 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 48395; Mature: 48395
Theoretical pI: Translated: 3.76; Mature: 3.76
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRNKLFLTKGFIAIMLVAVLIIAGCSSGDENEESADGKTVVDIFQFKVEFKEQFEEIVK CCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH QYEEENPDVKIDVQTVGGGNDYAASLKSSFAAGNEPAIFNVGGPTEVEEYRDYLTDLSDT HHHHCCCCEEEEEEEECCCCHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHCCCCH KAAEAALEGTLTGVMEDDKVLGLPYSQEGYGYIYNKEIFEQAGINPEELTTYEALEEAFA HHHHHHHHHHHHEEECCCCEEECCCCCCCCEEEECHHHHHHCCCCHHHHHHHHHHHHHHH TIDSQKEDLGLEAVMALPAKELWVMGNHLANTYIAPDFNNDIMEAYEASTIPFSKADELQ HHCCCHHHCCHHHHHHCCHHHHHHHCCHHHCCEECCCCCCHHHHHHHCCCCCCCCHHHHH RMLDLQNEYSVQPVLSLDYSQQVEQLFSTGKVAVIQQGNWIYPTVEQMDAEFAENNIGMI HHHHHHHCCCCCCEEECCHHHHHHHHHCCCCEEEEECCCEECCCHHHHHHHHHHCCCCEE PIPVDGMEGQLPVGVPQYWVVNSQKGEEVQQAAKDFLDWLYTSDAGKDFVLDEFKFIPAY EECCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCHHCEEECCCC EGYDTERIADPLSQEVYRYSQEGDTIGWVFMASPVGWQEDTMAVNMQRYLSGDISWEEVI CCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCHHHHHHHHHHCCCCCHHHHH EQSAADWENARQ HHHHCCHHHCCC >Mature Secondary Structure MKRNKLFLTKGFIAIMLVAVLIIAGCSSGDENEESADGKTVVDIFQFKVEFKEQFEEIVK CCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH QYEEENPDVKIDVQTVGGGNDYAASLKSSFAAGNEPAIFNVGGPTEVEEYRDYLTDLSDT HHHHCCCCEEEEEEEECCCCHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHCCCCH KAAEAALEGTLTGVMEDDKVLGLPYSQEGYGYIYNKEIFEQAGINPEELTTYEALEEAFA HHHHHHHHHHHHEEECCCCEEECCCCCCCCEEEECHHHHHHCCCCHHHHHHHHHHHHHHH TIDSQKEDLGLEAVMALPAKELWVMGNHLANTYIAPDFNNDIMEAYEASTIPFSKADELQ HHCCCHHHCCHHHHHHCCHHHHHHHCCHHHCCEECCCCCCHHHHHHHCCCCCCCCHHHHH RMLDLQNEYSVQPVLSLDYSQQVEQLFSTGKVAVIQQGNWIYPTVEQMDAEFAENNIGMI HHHHHHHCCCCCCEEECCHHHHHHHHHCCCCEEEEECCCEECCCHHHHHHHHHHCCCCEE PIPVDGMEGQLPVGVPQYWVVNSQKGEEVQQAAKDFLDWLYTSDAGKDFVLDEFKFIPAY EECCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCHHCEEECCCC EGYDTERIADPLSQEVYRYSQEGDTIGWVFMASPVGWQEDTMAVNMQRYLSGDISWEEVI CCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCHHHHHHHHHHCCCCCHHHHH EQSAADWENARQ HHHHCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]