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The map label for this gene is ycjS [H]

Identifier: 23100019

GI number: 23100019

Start: 2622324

End: 2623358

Strand: Reverse

Name: ycjS [H]

Synonym: OB2564

Alternate gene names: 23100019

Gene position: 2623358-2622324 (Counterclockwise)

Preceding gene: 23100020

Following gene: 23100018

Centisome position: 72.26

GC content: 36.62

Gene sequence:

>1035_bases
ATGACTAGGTTAAAAATGGGGATTATTGGTGTTGGAGGCATTGCAGAGAGTAGACACATACCTGCTTATCTTTATCTTAA
TGAAATAGTTGAAGTTACGGCTGTATGTGATGTGAATCCAGTCCGAGCAAAAGAAGTGGCTAATAAATTTGAGATAGCAC
AAGTTTATGATGATTACCATGCTATGTTTTCTAATGTAGATGCCGTAACGATCTGTACACCGAATAAGTTTCATGCTGAA
ATTGCTATATCAGCATTAGATGCTGGACTTCACGTTCTTTGTGAAAAGCCGATGGCAATGAATGCTAAAGAGGCGAAGTT
GATGTTAGAAGCTTCTAAAAGAAATGGTAAGAAACTATCGATTGCTTATCATTATCGATTTGTGGAATCTGTACAATTAT
CTAAGAAAACAATGGATGAGGTAGGAGATCCTCTAGTTACAAGGGTACAAGCGATGCGTCGTCGAAAAGTACCTGGTTGG
GGAGTTTTTACAAATAAAGACTTGCAAGGCGGAGGAAGTTTAATTGATTGGGGTTGTCATTTGTTAGATGCAGCTTTATG
GATGCTAGATAAACGAAAGCCAATTGAAGTAAATGGACAGATATACAATCAATTATCAAAAACACCAAATCAAATTAATG
AATGGGGAGCATTTGATCATGATACGTTCGATGTAGATGATCATGTTACCGCATACATACGATTTGATGACCATAGTACC
ATGTTGTTTGAATGCTCTTGGGCAGCAAATATTAAGGATGATATTACCCAAATCAGCATTTCTGGTGTAGATGGAGGACT
TCAAGTATTTCCATTTGAATTCTACACTTCAAAAAATGGGGCATTCACAACTAGTAGTGCTTATGTGCAAAATGATCAAC
ATCAAGCAGGAATATTACAAGCAAAGAACTTCATAGAAAGTTGTTTAGGACATGCTGAACTGATCAGTACACCCAAAGAG
TCTTTACAAGTAACACAATTAATTGATGCCATTTATGAATCTAGTACATCTGGGAGAAGCGTAAACATACAATAA

Upstream 100 bases:

>100_bases
TTATTGATGGATACGAAGGAATGAAGTCGCTTAACGTAATTTTAGCAGCATTGTCTTCTGTAGAGACGAAGCAAATTTTT
CAAATGGAGAAGTGAAAACG

Downstream 100 bases:

>100_bases
TATGAAACTTCATTCAGCGGAGTTTTCGTTTTTGCTGTTTTTAGAGACGGACATGTACGACATTATCCTTGTTGATTAAT
TTTGATTCTTAAAGTGGATA

Product: NADH-dependent dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 344; Mature: 343

Protein sequence:

>344_residues
MTRLKMGIIGVGGIAESRHIPAYLYLNEIVEVTAVCDVNPVRAKEVANKFEIAQVYDDYHAMFSNVDAVTICTPNKFHAE
IAISALDAGLHVLCEKPMAMNAKEAKLMLEASKRNGKKLSIAYHYRFVESVQLSKKTMDEVGDPLVTRVQAMRRRKVPGW
GVFTNKDLQGGGSLIDWGCHLLDAALWMLDKRKPIEVNGQIYNQLSKTPNQINEWGAFDHDTFDVDDHVTAYIRFDDHST
MLFECSWAANIKDDITQISISGVDGGLQVFPFEFYTSKNGAFTTSSAYVQNDQHQAGILQAKNFIESCLGHAELISTPKE
SLQVTQLIDAIYESSTSGRSVNIQ

Sequences:

>Translated_344_residues
MTRLKMGIIGVGGIAESRHIPAYLYLNEIVEVTAVCDVNPVRAKEVANKFEIAQVYDDYHAMFSNVDAVTICTPNKFHAE
IAISALDAGLHVLCEKPMAMNAKEAKLMLEASKRNGKKLSIAYHYRFVESVQLSKKTMDEVGDPLVTRVQAMRRRKVPGW
GVFTNKDLQGGGSLIDWGCHLLDAALWMLDKRKPIEVNGQIYNQLSKTPNQINEWGAFDHDTFDVDDHVTAYIRFDDHST
MLFECSWAANIKDDITQISISGVDGGLQVFPFEFYTSKNGAFTTSSAYVQNDQHQAGILQAKNFIESCLGHAELISTPKE
SLQVTQLIDAIYESSTSGRSVNIQ
>Mature_343_residues
TRLKMGIIGVGGIAESRHIPAYLYLNEIVEVTAVCDVNPVRAKEVANKFEIAQVYDDYHAMFSNVDAVTICTPNKFHAEI
AISALDAGLHVLCEKPMAMNAKEAKLMLEASKRNGKKLSIAYHYRFVESVQLSKKTMDEVGDPLVTRVQAMRRRKVPGWG
VFTNKDLQGGGSLIDWGCHLLDAALWMLDKRKPIEVNGQIYNQLSKTPNQINEWGAFDHDTFDVDDHVTAYIRFDDHSTM
LFECSWAANIKDDITQISISGVDGGLQVFPFEFYTSKNGAFTTSSAYVQNDQHQAGILQAKNFIESCLGHAELISTPKES
LQVTQLIDAIYESSTSGRSVNIQ

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Escherichia coli, GI1787574, Length=346, Percent_Identity=36.1271676300578, Blast_Score=218, Evalue=3e-58,
Organism=Escherichia coli, GI1787307, Length=190, Percent_Identity=24.7368421052632, Blast_Score=63, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6323975, Length=203, Percent_Identity=25.615763546798, Blast_Score=73, Evalue=6e-14,
Organism=Drosophila melanogaster, GI24581117, Length=249, Percent_Identity=28.1124497991968, Blast_Score=76, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 38317; Mature: 38186

Theoretical pI: Translated: 5.96; Mature: 5.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRLKMGIIGVGGIAESRHIPAYLYLNEIVEVTAVCDVNPVRAKEVANKFEIAQVYDDYH
CCEEEEEEEEECCCCCCCCCCEEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
AMFSNVDAVTICTPNKFHAEIAISALDAGLHVLCEKPMAMNAKEAKLMLEASKRNGKKLS
HHHCCCCEEEEECCCCEEHEEEEEHHHCCHHEEECCCCCCCHHHHHEEEEECCCCCCEEE
IAYHYRFVESVQLSKKTMDEVGDPLVTRVQAMRRRKVPGWGVFTNKDLQGGGSLIDWGCH
EEEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCEEECCCCCCCCCHHHHHHH
LLDAALWMLDKRKPIEVNGQIYNQLSKTPNQINEWGAFDHDTFDVDDHVTAYIRFDDHST
HHHHHHHHHCCCCCEEECHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCE
MLFECSWAANIKDDITQISISGVDGGLQVFPFEFYTSKNGAFTTSSAYVQNDQHQAGILQ
EEEEEEECCCCCCCCEEEEEECCCCCCEEEEEEEEECCCCCEEECCHHEECCCCHHHHHH
AKNFIESCLGHAELISTPKESLQVTQLIDAIYESSTSGRSVNIQ
HHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHCCCCCCEEECC
>Mature Secondary Structure 
TRLKMGIIGVGGIAESRHIPAYLYLNEIVEVTAVCDVNPVRAKEVANKFEIAQVYDDYH
CEEEEEEEEECCCCCCCCCCEEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
AMFSNVDAVTICTPNKFHAEIAISALDAGLHVLCEKPMAMNAKEAKLMLEASKRNGKKLS
HHHCCCCEEEEECCCCEEHEEEEEHHHCCHHEEECCCCCCCHHHHHEEEEECCCCCCEEE
IAYHYRFVESVQLSKKTMDEVGDPLVTRVQAMRRRKVPGWGVFTNKDLQGGGSLIDWGCH
EEEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCEEECCCCCCCCCHHHHHHH
LLDAALWMLDKRKPIEVNGQIYNQLSKTPNQINEWGAFDHDTFDVDDHVTAYIRFDDHST
HHHHHHHHHCCCCCEEECHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCE
MLFECSWAANIKDDITQISISGVDGGLQVFPFEFYTSKNGAFTTSSAYVQNDQHQAGILQ
EEEEEEECCCCCCCCEEEEEECCCCCCEEEEEEEEECCCCCEEECCHHEECCCCHHHHHH
AKNFIESCLGHAELISTPKESLQVTQLIDAIYESSTSGRSVNIQ
HHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]