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The map label for this gene is yvcD [H]

Identifier: 23099925

GI number: 23099925

Start: 2526928

End: 2527917

Strand: Reverse

Name: yvcD [H]

Synonym: OB2470

Alternate gene names: 23099925

Gene position: 2527917-2526928 (Counterclockwise)

Preceding gene: 23099926

Following gene: 23099924

Centisome position: 69.63

GC content: 31.72

Gene sequence:

>990_bases
ATGCAATCTAAAGGTAAAAAAGCTGAATATAATAAGGTGATCCCTTTTATCCCTGAAGGAGATTTTTATTATACAAAAGG
TGTTGAAGCGTTTAAAAAACGTAAATTTGACATTGCTATTAAATGGATGAAAAAAGCCATGGAACAAAAACCAAAAGACC
CTTTATATAAATGCCAATTATCGATTATATATACAGAAGTAGGAGCTTATCATAAAGCGAATCAATTATTAACCGAAGTC
TTGCAATCTAGTGATTATATAGATTGCTATTATTTGATCGCAAATAATTACGCTCATCTTGGTTTGTTATACGATGCAAG
AAAATATGCTCAGTTCTATTTGGATAAAGAACCAGACGGTGATTTTAGTGAAGATGCTAATAGATTACTTGAATTAATTC
AAATTGATGAAGATATCGATGACTTAGATTTAGAAGATGAAGATGAGTTACTCATTTTTCAAGAAACTGCCTTTTATCAT
ATGGAAAATAGTGAATGGACAAAAGCAATACCAATTATTGAAGAAATGATAGAATTATTCCCGGATCATATTTTAGCAAA
ACATGATTATGCACAAGCAATTTTTTATACAGGAAAGCAAAATGAAGCTATTCAGATTGAGAAAGACATTCTAGAAGAAG
ATCCAAATTCTTTGTACAGCCATATGAATTTAGCTTTATTTTATTATGAGAACAATGATACTGCATATGAAAAGCATATT
CAGGCATTACTAAATATATATCCAATTCATGTACAACAAAAGCTGCGTGTTGCAGTAACTTTAGCACGAACAGGGCATGC
AGAAGCAGCATACAGCAGATTTAAACAGCTTACAAAAGAACCAGTGAAAACGCATCTATCTTATTATAAATGGTATAGTA
TTTGTGCCTACAATTGCGGAGACCCTGGAAAAGCACTAGATATATGGGAAGAAGGATGCAAAAAACATCCACGATTATCT
GATGAAGAAGGTCCCTGGAATAATAAATAA

Upstream 100 bases:

>100_bases
CAAAATTCGAACAAATTTTGCAATGTGTGTAGACACTATGGTGATATCATATATAGTGTGATATACTTTGGACGAATGTT
TAGAAAATAGGGGGATACAC

Downstream 100 bases:

>100_bases
GTAATGAGCAAAAAGATAGACGGATATCAATCGATTAATTAAACTAGATGATGGAATTAAATAGAATACGGGGGCGATTT
ATATGTCCGAAGAAAAAATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 329; Mature: 329

Protein sequence:

>329_residues
MQSKGKKAEYNKVIPFIPEGDFYYTKGVEAFKKRKFDIAIKWMKKAMEQKPKDPLYKCQLSIIYTEVGAYHKANQLLTEV
LQSSDYIDCYYLIANNYAHLGLLYDARKYAQFYLDKEPDGDFSEDANRLLELIQIDEDIDDLDLEDEDELLIFQETAFYH
MENSEWTKAIPIIEEMIELFPDHILAKHDYAQAIFYTGKQNEAIQIEKDILEEDPNSLYSHMNLALFYYENNDTAYEKHI
QALLNIYPIHVQQKLRVAVTLARTGHAEAAYSRFKQLTKEPVKTHLSYYKWYSICAYNCGDPGKALDIWEEGCKKHPRLS
DEEGPWNNK

Sequences:

>Translated_329_residues
MQSKGKKAEYNKVIPFIPEGDFYYTKGVEAFKKRKFDIAIKWMKKAMEQKPKDPLYKCQLSIIYTEVGAYHKANQLLTEV
LQSSDYIDCYYLIANNYAHLGLLYDARKYAQFYLDKEPDGDFSEDANRLLELIQIDEDIDDLDLEDEDELLIFQETAFYH
MENSEWTKAIPIIEEMIELFPDHILAKHDYAQAIFYTGKQNEAIQIEKDILEEDPNSLYSHMNLALFYYENNDTAYEKHI
QALLNIYPIHVQQKLRVAVTLARTGHAEAAYSRFKQLTKEPVKTHLSYYKWYSICAYNCGDPGKALDIWEEGCKKHPRLS
DEEGPWNNK
>Mature_329_residues
MQSKGKKAEYNKVIPFIPEGDFYYTKGVEAFKKRKFDIAIKWMKKAMEQKPKDPLYKCQLSIIYTEVGAYHKANQLLTEV
LQSSDYIDCYYLIANNYAHLGLLYDARKYAQFYLDKEPDGDFSEDANRLLELIQIDEDIDDLDLEDEDELLIFQETAFYH
MENSEWTKAIPIIEEMIELFPDHILAKHDYAQAIFYTGKQNEAIQIEKDILEEDPNSLYSHMNLALFYYENNDTAYEKHI
QALLNIYPIHVQQKLRVAVTLARTGHAEAAYSRFKQLTKEPVKTHLSYYKWYSICAYNCGDPGKALDIWEEGCKKHPRLS
DEEGPWNNK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 3 TPR repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38616; Mature: 38616

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSKGKKAEYNKVIPFIPEGDFYYTKGVEAFKKRKFDIAIKWMKKAMEQKPKDPLYKCQL
CCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHEEE
SIIYTEVGAYHKANQLLTEVLQSSDYIDCYYLIANNYAHLGLLYDARKYAQFYLDKEPDG
EEEEEHHCCHHHHHHHHHHHHHCCCCCEEEEEEECCCEEEEHHHHHHHHHHHHCCCCCCC
DFSEDANRLLELIQIDEDIDDLDLEDEDELLIFQETAFYHMENSEWTKAIPIIEEMIELF
CHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEEEEECCCCHHHHHHHHHHHHHHC
PDHILAKHDYAQAIFYTGKQNEAIQIEKDILEEDPNSLYSHMNLALFYYENNDTAYEKHI
HHHHHHHCCHHHEEEEECCCCCEEEEEHHHHHCCHHHHHHHCEEEEEEEECCCHHHHHHH
QALLNIYPIHVQQKLRVAVTLARTGHAEAAYSRFKQLTKEPVKTHLSYYKWYSICAYNCG
HHHHHHHHHHHHHHEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCC
DPGKALDIWEEGCKKHPRLSDEEGPWNNK
CCCCHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MQSKGKKAEYNKVIPFIPEGDFYYTKGVEAFKKRKFDIAIKWMKKAMEQKPKDPLYKCQL
CCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHEEE
SIIYTEVGAYHKANQLLTEVLQSSDYIDCYYLIANNYAHLGLLYDARKYAQFYLDKEPDG
EEEEEHHCCHHHHHHHHHHHHHCCCCCEEEEEEECCCEEEEHHHHHHHHHHHHCCCCCCC
DFSEDANRLLELIQIDEDIDDLDLEDEDELLIFQETAFYHMENSEWTKAIPIIEEMIELF
CHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEEEEECCCCHHHHHHHHHHHHHHC
PDHILAKHDYAQAIFYTGKQNEAIQIEKDILEEDPNSLYSHMNLALFYYENNDTAYEKHI
HHHHHHHCCHHHEEEEECCCCCEEEEEHHHHHCCHHHHHHHCEEEEEEEECCCHHHHHHH
QALLNIYPIHVQQKLRVAVTLARTGHAEAAYSRFKQLTKEPVKTHLSYYKWYSICAYNCG
HHHHHHHHHHHHHHEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCC
DPGKALDIWEEGCKKHPRLSDEEGPWNNK
CCCCHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]