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The map label for this gene is yttP [H]

Identifier: 23099656

GI number: 23099656

Start: 2235607

End: 2236251

Strand: Reverse

Name: yttP [H]

Synonym: OB2201

Alternate gene names: 23099656

Gene position: 2236251-2235607 (Counterclockwise)

Preceding gene: 23099658

Following gene: 23099655

Centisome position: 61.6

GC content: 32.56

Gene sequence:

>645_bases
ATGAAAAATAATCTGACAAAACAAAAAGTTGTTGACGCCGCTTCGTCATTGTTCTTTCAAAAAGGATTTCATGGAACCTC
GGTTCGAGACATAGCAGACAAGGCTGCTGTCAATGTATCTTTAATAAGTTATTACTTTAATGGGAAGCAAGGGCTTTTAG
AGTATGCAGTCACAGCATATTATGAAGCGTACCTACAAAGTGTTGAAGCTACACTAGAGGAAGTAGCGCCTCTAAGTCCA
AAAGATCAATTGCACCAATTAATTTTTACTATTATACATTATAAGCAATCCTATCATCAATTAACGTGCTTTATACAACG
AGAACTCTCTCTGGATTCGGTGTTTGTTAGGGAAATGGCAGTTACTTATTTGGCAAAAGAGAATTATTATATTCAGAAAA
CCTTTTATGATGCTCTTTCTAATAAAGTTCAATCCGATGAGAAAACGTATTTGTTAATGCAATTGAAAGGTATGTTAATT
ACACCATATATATTGCATAGTGAGTGGAAAGACCAAATTATTGGCGAATATTCTCACCAACAATTTATTAAAAAATATGT
AAGAACAATTCAAAAGTGGCTGGATTTTGTTTTGGTTAATAAAAATGAAAAAGATTTTATACATTCTGGTAACAAACCTT
CTTAA

Upstream 100 bases:

>100_bases
CGTATGACAAATGGTGACAATCATAGTTTTTTTGTCGAGAATTTATTGAAGGAATTTCATCATTAACTGTCGTAACTGAT
TAATAAGGAGCTGAATCATG

Downstream 100 bases:

>100_bases
AAAATCGTGACGAATACGCAATAAATTTGCATTTTTTTAGCCAAAAATGCAAATAACATGGTATCATTAAGTAAATATAG
TTACGTATACTTAAATTTTA

Product: hypothetical protein

Products: NA

Alternate protein names: Stress response protein yttP [H]

Number of amino acids: Translated: 214; Mature: 214

Protein sequence:

>214_residues
MKNNLTKQKVVDAASSLFFQKGFHGTSVRDIADKAAVNVSLISYYFNGKQGLLEYAVTAYYEAYLQSVEATLEEVAPLSP
KDQLHQLIFTIIHYKQSYHQLTCFIQRELSLDSVFVREMAVTYLAKENYYIQKTFYDALSNKVQSDEKTYLLMQLKGMLI
TPYILHSEWKDQIIGEYSHQQFIKKYVRTIQKWLDFVLVNKNEKDFIHSGNKPS

Sequences:

>Translated_214_residues
MKNNLTKQKVVDAASSLFFQKGFHGTSVRDIADKAAVNVSLISYYFNGKQGLLEYAVTAYYEAYLQSVEATLEEVAPLSP
KDQLHQLIFTIIHYKQSYHQLTCFIQRELSLDSVFVREMAVTYLAKENYYIQKTFYDALSNKVQSDEKTYLLMQLKGMLI
TPYILHSEWKDQIIGEYSHQQFIKKYVRTIQKWLDFVLVNKNEKDFIHSGNKPS
>Mature_214_residues
MKNNLTKQKVVDAASSLFFQKGFHGTSVRDIADKAAVNVSLISYYFNGKQGLLEYAVTAYYEAYLQSVEATLEEVAPLSP
KDQLHQLIFTIIHYKQSYHQLTCFIQRELSLDSVFVREMAVTYLAKENYYIQKTFYDALSNKVQSDEKTYLLMQLKGMLI
TPYILHSEWKDQIIGEYSHQQFIKKYVRTIQKWLDFVLVNKNEKDFIHSGNKPS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR015893
- InterPro:   IPR001647 [H]

Pfam domain/function: PF00440 TetR_N [H]

EC number: NA

Molecular weight: Translated: 24952; Mature: 24952

Theoretical pI: Translated: 8.73; Mature: 8.73

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNNLTKQKVVDAASSLFFQKGFHGTSVRDIADKAAVNVSLISYYFNGKQGLLEYAVTAY
CCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
YEAYLQSVEATLEEVAPLSPKDQLHQLIFTIIHYKQSYHQLTCFIQRELSLDSVFVREMA
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
VTYLAKENYYIQKTFYDALSNKVQSDEKTYLLMQLKGMLITPYILHSEWKDQIIGEYSHQ
HHHHHHCCEEHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
QFIKKYVRTIQKWLDFVLVNKNEKDFIHSGNKPS
HHHHHHHHHHHHHHHHEEECCCCHHHHCCCCCCC
>Mature Secondary Structure
MKNNLTKQKVVDAASSLFFQKGFHGTSVRDIADKAAVNVSLISYYFNGKQGLLEYAVTAY
CCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
YEAYLQSVEATLEEVAPLSPKDQLHQLIFTIIHYKQSYHQLTCFIQRELSLDSVFVREMA
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
VTYLAKENYYIQKTFYDALSNKVQSDEKTYLLMQLKGMLITPYILHSEWKDQIIGEYSHQ
HHHHHHCCEEHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
QFIKKYVRTIQKWLDFVLVNKNEKDFIHSGNKPS
HHHHHHHHHHHHHHHHEEECCCCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377; 11988534 [H]