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The map label for this gene is ysmA [H]

Identifier: 23099566

GI number: 23099566

Start: 2144531

End: 2145010

Strand: Reverse

Name: ysmA [H]

Synonym: OB2111

Alternate gene names: 23099566

Gene position: 2145010-2144531 (Counterclockwise)

Preceding gene: 23099567

Following gene: 23099564

Centisome position: 59.08

GC content: 31.25

Gene sequence:

>480_bases
ATGAAATCCATTGAGTATATAGATGATTTCAGGTCATGGGCAGAAGAGTTTGAATTCTACATACCAATTAATATTCGTTT
TTCTGAGACGGATATGTATGGACATATGAACAATGTGTCTCCGTTCATTTATTTTGAAGAAGCAAGAATTGCATATTTAC
AATCTTTAGGACTATTCAATGATTTTACTAATAAAGACGAAGGAATCATTGTTGCTGATTTACAATGTGATTATTTAAAG
CAACTATTTTTTGGAGACCAAGTGAATGTTCATGTTAAAACCCAAGAAGTAGGGAATTCCTCTTTTGATGTGCATTACAT
GGTTACAAAAGGAAATTTTGATGTGGTTCTTACAGCAAGAGGTAGATTAGTGTATATAGATGCCAATCTTGGTAAATCTA
AACCATTAACAGAAGATATGAAAGAAAAACTTATGAGTAGAAATTTTATCAAAACACAAGTAAAACCGACTCCCTTATAA

Upstream 100 bases:

>100_bases
TGGAAGTGACCAAGCGTTATAAATTCGAACATGAAAGACCCTAACCGATGAACAGGCTAGGGTCTTCATCATATAATATG
GGAAAGTGGAGGAAGTTACG

Downstream 100 bases:

>100_bases
GGGTAGTCGGTTTTATTACAGCTTTAATTCCCCCATGCGAAGAAGCTCAACTACGGCTTGTGACCGTCCCTTGACTCCCA
ATTTTTGCATAGCATTTGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 159; Mature: 159

Protein sequence:

>159_residues
MKSIEYIDDFRSWAEEFEFYIPINIRFSETDMYGHMNNVSPFIYFEEARIAYLQSLGLFNDFTNKDEGIIVADLQCDYLK
QLFFGDQVNVHVKTQEVGNSSFDVHYMVTKGNFDVVLTARGRLVYIDANLGKSKPLTEDMKEKLMSRNFIKTQVKPTPL

Sequences:

>Translated_159_residues
MKSIEYIDDFRSWAEEFEFYIPINIRFSETDMYGHMNNVSPFIYFEEARIAYLQSLGLFNDFTNKDEGIIVADLQCDYLK
QLFFGDQVNVHVKTQEVGNSSFDVHYMVTKGNFDVVLTARGRLVYIDANLGKSKPLTEDMKEKLMSRNFIKTQVKPTPL
>Mature_159_residues
MKSIEYIDDFRSWAEEFEFYIPINIRFSETDMYGHMNNVSPFIYFEEARIAYLQSLGLFNDFTNKDEGIIVADLQCDYLK
QLFFGDQVNVHVKTQEVGNSSFDVHYMVTKGNFDVVLTARGRLVYIDANLGKSKPLTEDMKEKLMSRNFIKTQVKPTPL

Specific function: Unknown

COG id: COG0824

COG function: function code R; Predicted thioesterase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006683 [H]

Pfam domain/function: PF03061 4HBT [H]

EC number: NA

Molecular weight: Translated: 18536; Mature: 18536

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSIEYIDDFRSWAEEFEFYIPINIRFSETDMYGHMNNVSPFIYFEEARIAYLQSLGLFN
CCCCHHHHHHHHHHHHCEEEEEEEEEECCCCCCCCCCCCCEEEEECCHHHHHHHHCCCCC
DFTNKDEGIIVADLQCDYLKQLFFGDQVNVHVKTQEVGNSSFDVHYMVTKGNFDVVLTAR
CCCCCCCCEEEEECCHHHHHHHHCCCEEEEEEEEHHCCCCCCEEEEEEECCCEEEEEEEC
GRLVYIDANLGKSKPLTEDMKEKLMSRNFIKTQVKPTPL
CEEEEEECCCCCCCCCHHHHHHHHHHCCCEEECCCCCCC
>Mature Secondary Structure
MKSIEYIDDFRSWAEEFEFYIPINIRFSETDMYGHMNNVSPFIYFEEARIAYLQSLGLFN
CCCCHHHHHHHHHHHHCEEEEEEEEEECCCCCCCCCCCCCEEEEECCHHHHHHHHCCCCC
DFTNKDEGIIVADLQCDYLKQLFFGDQVNVHVKTQEVGNSSFDVHYMVTKGNFDVVLTAR
CCCCCCCCEEEEECCHHHHHHHHCCCEEEEEEEEHHCCCCCCEEEEEEECCCEEEEEEEC
GRLVYIDANLGKSKPLTEDMKEKLMSRNFIKTQVKPTPL
CEEEEEECCCCCCCCCHHHHHHHHHHCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3114423; 8969504; 9384377 [H]