| Definition | Oceanobacillus iheyensis HTE831, complete genome. |
|---|---|
| Accession | NC_004193 |
| Length | 3,630,528 |
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The map label for this gene is yteS [H]
Identifier: 23099540
GI number: 23099540
Start: 2115533
End: 2116066
Strand: Reverse
Name: yteS [H]
Synonym: OB2085
Alternate gene names: 23099540
Gene position: 2116066-2115533 (Counterclockwise)
Preceding gene: 23099541
Following gene: 23099539
Centisome position: 58.29
GC content: 33.15
Gene sequence:
>534_bases ATGGGTCGTTTCATAAGTAAAATTGTAATTGCTTTGATATTTATGCTTGTTCTGACAGGTTGCGGACAGAAGACCGACAC GTTAGAGATTTTGTTTTTCACTGAGATTACGGAAGATACAGGAGATAGCTTAGTCAATAATCTGGAACAAATTTACCCAG AGTCAGCTTTAAAGTTTAAAAGTGAATTTTATGCATCTGTCTATGAAAGGTTAATTGCTGAAATAGCTTCACATAATGGA GATATATTAATAGTTGAATCAAATTTGCTAACGCCGGGTAGTTTTGATTCGGAAGGTCTTATTCCTTTTGAATTAACTGA TGAACGTAAGAAAGATATACCAAAAGAATATTTTCTCAAAAATGAAAAAACGAAAAAGGATACTATCTACGCTTTGCCAA TAGATGAGAATTCTGATTTATTAGGAAAACTTAATATTAATCTGAATTCTGAGTTAGTCGCCTTGGTACCAATTTATAGT GAACATCAAGACTTAGCTGTACAAATGGTGATGGAAGCTTTAACAGCCCGATAA
Upstream 100 bases:
>100_bases AAAAATGATTTACACGGTGTGGGTGCATTTATATTAGCAAGTGTAGAGATGCATAAATTTTTTAACCTATGAACCTTATT TGGAAGGAAGACGAAATACT
Downstream 100 bases:
>100_bases CGATACTTTCCATTGGAGGAAACTATGAATCATATAAATTTGTTCCTTGCAGGGGATTCAACAATGGCTACTTATGATGT AAATAGAGCACCACAAATGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 177; Mature: 176
Protein sequence:
>177_residues MGRFISKIVIALIFMLVLTGCGQKTDTLEILFFTEITEDTGDSLVNNLEQIYPESALKFKSEFYASVYERLIAEIASHNG DILIVESNLLTPGSFDSEGLIPFELTDERKKDIPKEYFLKNEKTKKDTIYALPIDENSDLLGKLNINLNSELVALVPIYS EHQDLAVQMVMEALTAR
Sequences:
>Translated_177_residues MGRFISKIVIALIFMLVLTGCGQKTDTLEILFFTEITEDTGDSLVNNLEQIYPESALKFKSEFYASVYERLIAEIASHNG DILIVESNLLTPGSFDSEGLIPFELTDERKKDIPKEYFLKNEKTKKDTIYALPIDENSDLLGKLNINLNSELVALVPIYS EHQDLAVQMVMEALTAR >Mature_176_residues GRFISKIVIALIFMLVLTGCGQKTDTLEILFFTEITEDTGDSLVNNLEQIYPESALKFKSEFYASVYERLIAEIASHNGD ILIVESNLLTPGSFDSEGLIPFELTDERKKDIPKEYFLKNEKTKKDTIYALPIDENSDLLGKLNINLNSELVALVPIYSE HQDLAVQMVMEALTAR
Specific function: May play a role in the degradation of type I rhamnogalacturonan derived from plant cell walls [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19955; Mature: 19824
Theoretical pI: Translated: 4.25; Mature: 4.25
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRFISKIVIALIFMLVLTGCGQKTDTLEILFFTEITEDTGDSLVNNLEQIYPESALKFK CCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHCCHHHHHHH SEFYASVYERLIAEIASHNGDILIVESNLLTPGSFDSEGLIPFELTDERKKDIPKEYFLK HHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEEEEECCCHHHCCCHHHHHC NEKTKKDTIYALPIDENSDLLGKLNINLNSELVALVPIYSEHQDLAVQMVMEALTAR CCCCCCCEEEEEECCCCCCEEEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure GRFISKIVIALIFMLVLTGCGQKTDTLEILFFTEITEDTGDSLVNNLEQIYPESALKFK CHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHCCHHHHHHH SEFYASVYERLIAEIASHNGDILIVESNLLTPGSFDSEGLIPFELTDERKKDIPKEYFLK HHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEEEEECCCHHHCCCHHHHHC NEKTKKDTIYALPIDENSDLLGKLNINLNSELVALVPIYSEHQDLAVQMVMEALTAR CCCCCCCEEEEEECCCCCCEEEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9387221; 9384377 [H]