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The map label for this gene is yebC [C]

Identifier: 23099493

GI number: 23099493

Start: 2066576

End: 2067307

Strand: Reverse

Name: yebC [C]

Synonym: OB2038

Alternate gene names: 23099493

Gene position: 2067307-2066576 (Counterclockwise)

Preceding gene: 23099494

Following gene: 23099492

Centisome position: 56.94

GC content: 36.75

Gene sequence:

>732_bases
ATGGCTGGTCATTCTAAATGGAAAAATATACAAAAACGTAAAAATGCACAAGATGCCAAAAAAGGTAAAATTTTTATGCG
TCATGCTAAAGATATATATATTGCAGCTAAGCAAGGTGGCGGGGATTTAGGTACAAACGCCGCGTTGCGTACAGCTGTTG
AGAAAGCAAAAGCCGACAATATGCCAAATGACAATATTGATCGTAACATTAAGAAGGCAACAGGTTCTCTAGATGGAGCA
ACCTATGAAGAAATAACATATGAAGGCTATGGACCAGGTGGAGTAGCCGTAATTGTTAATGTTCTTACTGATAATAAGAA
TCGTACGGCAGCTGAAGTAAGACACGCTTTCAAAAAAAACGGTGGAAATCTTGGCGAGAATGGTAGTGTATCATTTATGT
TTGATCGTAAAGGATATATTGTTATTGAAAATGAAGAGGGTACTTTAGACGAAGATACTATAACAATGGATGCTTTAGAA
GCAGGAGCGGAAGATGTTGTTCCACAAGAGGGTGCTTTTGAACTCTATACCGAACCGGAAGATTTCCAAGAAGTTGTAAA
ATATTTAGAAGAAAATGATTATACTTTAGCTGACTCTGAAGTGACATTATTCCCGCAAAACTATAATCAACTATCTCAAG
AAGATGAAGCGAAGATGATGAAGTTAATAGATGCGCTTGAGGATAGTGAAGACGTTCAAGATATCCATCATAATTTAGAG
GAAAGTAATTAG

Upstream 100 bases:

>100_bases
TTAAGATAGATGGTAATCAGTGATAGAAGTCTTTATCCCTTTGACAAATAGGCTTTTTTTGATATAGTAAAAAAAGAGTT
TAGAGAGAGGGGAAGATCTT

Downstream 100 bases:

>100_bases
TTAATGGAATGTTTAGGCTTCTATTTCACAATGAAATAGAAGTTTATTCATTCTTTTAGATGAATAAATTTCATATTTGA
CAAGTTTTATTTAAATCCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 243; Mature: 242

Protein sequence:

>243_residues
MAGHSKWKNIQKRKNAQDAKKGKIFMRHAKDIYIAAKQGGGDLGTNAALRTAVEKAKADNMPNDNIDRNIKKATGSLDGA
TYEEITYEGYGPGGVAVIVNVLTDNKNRTAAEVRHAFKKNGGNLGENGSVSFMFDRKGYIVIENEEGTLDEDTITMDALE
AGAEDVVPQEGAFELYTEPEDFQEVVKYLEENDYTLADSEVTLFPQNYNQLSQEDEAKMMKLIDALEDSEDVQDIHHNLE
ESN

Sequences:

>Translated_243_residues
MAGHSKWKNIQKRKNAQDAKKGKIFMRHAKDIYIAAKQGGGDLGTNAALRTAVEKAKADNMPNDNIDRNIKKATGSLDGA
TYEEITYEGYGPGGVAVIVNVLTDNKNRTAAEVRHAFKKNGGNLGENGSVSFMFDRKGYIVIENEEGTLDEDTITMDALE
AGAEDVVPQEGAFELYTEPEDFQEVVKYLEENDYTLADSEVTLFPQNYNQLSQEDEAKMMKLIDALEDSEDVQDIHHNLE
ESN
>Mature_242_residues
AGHSKWKNIQKRKNAQDAKKGKIFMRHAKDIYIAAKQGGGDLGTNAALRTAVEKAKADNMPNDNIDRNIKKATGSLDGAT
YEEITYEGYGPGGVAVIVNVLTDNKNRTAAEVRHAFKKNGGNLGENGSVSFMFDRKGYIVIENEEGTLDEDTITMDALEA
GAEDVVPQEGAFELYTEPEDFQEVVKYLEENDYTLADSEVTLFPQNYNQLSQEDEAKMMKLIDALEDSEDVQDIHHNLEE
SN

Specific function: Unknown

COG id: COG0217

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TACO1 family

Homologues:

Organism=Homo sapiens, GI27545315, Length=247, Percent_Identity=28.7449392712551, Blast_Score=117, Evalue=7e-27,
Organism=Escherichia coli, GI1788171, Length=244, Percent_Identity=50.4098360655738, Blast_Score=233, Evalue=6e-63,
Organism=Escherichia coli, GI1788294, Length=237, Percent_Identity=41.7721518987342, Blast_Score=160, Evalue=7e-41,
Organism=Caenorhabditis elegans, GI17556100, Length=244, Percent_Identity=26.6393442622951, Blast_Score=82, Evalue=2e-16,
Organism=Saccharomyces cerevisiae, GI6321458, Length=268, Percent_Identity=34.3283582089552, Blast_Score=121, Evalue=1e-28,
Organism=Drosophila melanogaster, GI24583305, Length=252, Percent_Identity=29.3650793650794, Blast_Score=94, Evalue=9e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2038_OCEIH (Q8EPQ4)

Other databases:

- EMBL:   BA000028
- RefSeq:   NP_692959.1
- ProteinModelPortal:   Q8EPQ4
- SMR:   Q8EPQ4
- GeneID:   1018528
- GenomeReviews:   BA000028_GR
- KEGG:   oih:OB2038
- NMPDR:   fig|221109.1.peg.2036
- HOGENOM:   HBG715231
- OMA:   VYANFDI
- ProtClustDB:   PRK00110
- BioCyc:   OIHE221109:OB2038-MONOMER
- HAMAP:   MF_00693
- InterPro:   IPR002876
- InterPro:   IPR017856
- Gene3D:   G3DSA:1.10.10.200
- PANTHER:   PTHR12532
- TIGRFAMs:   TIGR01033

Pfam domain/function: PF01709 DUF28; SSF75625 DUF28

EC number: NA

Molecular weight: Translated: 26959; Mature: 26828

Theoretical pI: Translated: 4.35; Mature: 4.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGHSKWKNIQKRKNAQDAKKGKIFMRHAKDIYIAAKQGGGDLGTNAALRTAVEKAKADN
CCCCHHHHHHHHHCCCCHHHHCCEEEEECCEEEEEEECCCCCCCCHHHHHHHHHHHHHCC
MPNDNIDRNIKKATGSLDGATYEEITYEGYGPGGVAVIVNVLTDNKNRTAAEVRHAFKKN
CCCCCHHHHHHHHCCCCCCCCHHHEEECCCCCCCHHEEEEEHHCCCCCHHHHHHHHHHHC
GGNLGENGSVSFMFDRKGYIVIENEEGTLDEDTITMDALEAGAEDVVPQEGAFELYTEPE
CCCCCCCCCEEEEECCCCEEEEECCCCCCCCCHHHHHHHHCCHHHCCCCCCCEEECCCCH
DFQEVVKYLEENDYTLADSEVTLFPQNYNQLSQEDEAKMMKLIDALEDSEDVQDIHHNLE
HHHHHHHHHHCCCCEEECCEEEEECCCHHHHCHHHHHHHHHHHHHHCCCHHHHHHHHHHC
ESN
CCC
>Mature Secondary Structure 
AGHSKWKNIQKRKNAQDAKKGKIFMRHAKDIYIAAKQGGGDLGTNAALRTAVEKAKADN
CCCHHHHHHHHHCCCCHHHHCCEEEEECCEEEEEEECCCCCCCCHHHHHHHHHHHHHCC
MPNDNIDRNIKKATGSLDGATYEEITYEGYGPGGVAVIVNVLTDNKNRTAAEVRHAFKKN
CCCCCHHHHHHHHCCCCCCCCHHHEEECCCCCCCHHEEEEEHHCCCCCHHHHHHHHHHHC
GGNLGENGSVSFMFDRKGYIVIENEEGTLDEDTITMDALEAGAEDVVPQEGAFELYTEPE
CCCCCCCCCEEEEECCCCEEEEECCCCCCCCCHHHHHHHHCCHHHCCCCCCCEEECCCCH
DFQEVVKYLEENDYTLADSEVTLFPQNYNQLSQEDEAKMMKLIDALEDSEDVQDIHHNLE
HHHHHHHHHHCCCCEEECCEEEEECCCHHHHCHHHHHHHHHHHHHHCCCHHHHHHHHHHC
ESN
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12235376