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The map label for this gene is yfbS [C]

Identifier: 23099115

GI number: 23099115

Start: 1703261

End: 1705027

Strand: Direct

Name: yfbS [C]

Synonym: OB1660

Alternate gene names: 23099115

Gene position: 1703261-1705027 (Clockwise)

Preceding gene: 23099114

Following gene: 23099116

Centisome position: 46.91

GC content: 37.75

Gene sequence:

>1767_bases
ATGATATTCGTACTCCTTATGGTTATTGCCATGTTGGGAGCATTGCTTTTTGAAGTGGCAAGTCCATCGATTGTTGTGTT
CACGGTACTTACTGTTTTCCTGATAACGGGCATTCTTAATCCCTCTGAAGCTCTAAGCGGCTTTTCCAATGAAGGGATGA
TTACTGTTGGTCTCCTATTTGTTGTGGCAGGAGCAGTAAAGAAAAGTGGGATACTTGAAGATATTATGAAATCATGGATG
GCAGGAAGCCATAGAATGATAGATTCTGTGGCACGCTTTTTCATTCCTGTATCACTTCTATCAGGATTTCTCAATAATAC
ACCTATTGTCGTAACATTTATGCCGATCGTTAAAGGCTGGTGTGAAGAAAGGGGTATTGCACCTTCGAAGTTTTTGATCC
CCCTTTCTTACGTGACAATACTAGGTGGAACCATTACTGTTCTTGGAACGTCTACCAATTTGGTAGTTCACGGAATGCTA
ATCGATTATGGTTATGGTGGTTTTACTTTATTTCAGCTGGCAATTGTCGGTATACCGATTACTATAGTTGGTCTTATCTA
TATTTTTACGATTGGTTCCAAACTTCTTCCGGAGAATAAAGGCCTTCAACAACAAATTGATGAGGATCCACGTGAATATT
TGGCAGAACTGATTGTGGATCAGTCTTTCCCATACGCCAATCAAAGTATAAAAAATGCTGGATTACGAAATTTGAAGGGA
TTATATTTAATTGAAATTATTAGAGATAAAGAACGGATTTCTCCTGTCAGACCAACTACAATAATCCAGACAGCTGACCG
ATTAATTTTTACTGGATTGATCGAGACGCTTAGAGATGTCCAAATGACAAAAGGTTTAACATTACGAACAGGGACAGATT
TGGAACTTAGAGAACTGAAAAATGGTAATTCCGAGATTGTAGAAGTTGTTATAGCACATCAGTCTTCGTTGCAATCAAAA
ACGATCAAACAATTAAAGTTTCGCTCGAAATTTGAGGCAGGTGTGATAGCTGTTCACCGAGAAAGTGAGCGAATCGCAAG
CAAAATTGGAGACATTGTTCTAAAACCAGGAGATACGTTATTACTTCTAGCTGACAAAGATTTTGTTAGAAAGTATAAAC
ATTCGAAAGACTTCTATATCTTAACTTCTCCGGATACTACTGAAACGTTAAGGATAGACCCTATTAAAGGTTGGTTCACT
ATTATCCTGTTTTTTGGGATGATAGCACTTGTAACGTTAGGTGTATTCACCATGTTTAAAGCGATGACGATGGCAGTTGT
TTTATTACTACTGTTCAAGGTAATAAAACCGGGGGAAGCAAAGAAATATATACATTTCGACGTATTACTTTTGATTGCAA
GCTCATTCGGTATCGGTTTGGCCATTACTAAAACAGGGTTAGCTGAATATATTGCAAAAGGCATATTGATGTTGGGAAAG
CCAGCTGGTTTGGTAATTCTCTTACTATTGATTTATATTTTGACTAATATTTTCACAGAAATAATTACGAATAGCGCGGC
AGCAGTATTGATGTTTCCTGTTGGAATGGAAATGGCAAGGAATCTTCATGTTGAACCAATGGGGTTTGCAGTAATAATCG
CCATCGCTGCTTCTGCCAGTTTCATCACTCCAATTGGCTATCAAACAAATATGATTGTATATGGTCCAGGGGGTTACAAG
TTTATAGATTATGTAAAAATAGGGACACCATTAAGTCTGATAGTGATGGTATTGACTGTTAGCATTGTCAGTTACTGGTG
GTATTAG

Upstream 100 bases:

>100_bases
GCTACCCAAAGAATTTTCCAGACCAGAGGTTGCCTCTGTACTGATGAAAGGATTGAGCAAGAACAATACAAATTAAAGGG
TGTTTCCCGTGTCAGCAGAA

Downstream 100 bases:

>100_bases
GAGGGGAAAACATGAATAAATCTACGAATATCGTATGGCAAAAAACCAGTGTAAAGAAAGCAGATAGACAACATTTGAAT
AACCATAAAAGTGCTGTATT

Product: sulfur deprivation response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 588; Mature: 588

Protein sequence:

>588_residues
MIFVLLMVIAMLGALLFEVASPSIVVFTVLTVFLITGILNPSEALSGFSNEGMITVGLLFVVAGAVKKSGILEDIMKSWM
AGSHRMIDSVARFFIPVSLLSGFLNNTPIVVTFMPIVKGWCEERGIAPSKFLIPLSYVTILGGTITVLGTSTNLVVHGML
IDYGYGGFTLFQLAIVGIPITIVGLIYIFTIGSKLLPENKGLQQQIDEDPREYLAELIVDQSFPYANQSIKNAGLRNLKG
LYLIEIIRDKERISPVRPTTIIQTADRLIFTGLIETLRDVQMTKGLTLRTGTDLELRELKNGNSEIVEVVIAHQSSLQSK
TIKQLKFRSKFEAGVIAVHRESERIASKIGDIVLKPGDTLLLLADKDFVRKYKHSKDFYILTSPDTTETLRIDPIKGWFT
IILFFGMIALVTLGVFTMFKAMTMAVVLLLLFKVIKPGEAKKYIHFDVLLLIASSFGIGLAITKTGLAEYIAKGILMLGK
PAGLVILLLLIYILTNIFTEIITNSAAAVLMFPVGMEMARNLHVEPMGFAVIIAIAASASFITPIGYQTNMIVYGPGGYK
FIDYVKIGTPLSLIVMVLTVSIVSYWWY

Sequences:

>Translated_588_residues
MIFVLLMVIAMLGALLFEVASPSIVVFTVLTVFLITGILNPSEALSGFSNEGMITVGLLFVVAGAVKKSGILEDIMKSWM
AGSHRMIDSVARFFIPVSLLSGFLNNTPIVVTFMPIVKGWCEERGIAPSKFLIPLSYVTILGGTITVLGTSTNLVVHGML
IDYGYGGFTLFQLAIVGIPITIVGLIYIFTIGSKLLPENKGLQQQIDEDPREYLAELIVDQSFPYANQSIKNAGLRNLKG
LYLIEIIRDKERISPVRPTTIIQTADRLIFTGLIETLRDVQMTKGLTLRTGTDLELRELKNGNSEIVEVVIAHQSSLQSK
TIKQLKFRSKFEAGVIAVHRESERIASKIGDIVLKPGDTLLLLADKDFVRKYKHSKDFYILTSPDTTETLRIDPIKGWFT
IILFFGMIALVTLGVFTMFKAMTMAVVLLLLFKVIKPGEAKKYIHFDVLLLIASSFGIGLAITKTGLAEYIAKGILMLGK
PAGLVILLLLIYILTNIFTEIITNSAAAVLMFPVGMEMARNLHVEPMGFAVIIAIAASASFITPIGYQTNMIVYGPGGYK
FIDYVKIGTPLSLIVMVLTVSIVSYWWY
>Mature_588_residues
MIFVLLMVIAMLGALLFEVASPSIVVFTVLTVFLITGILNPSEALSGFSNEGMITVGLLFVVAGAVKKSGILEDIMKSWM
AGSHRMIDSVARFFIPVSLLSGFLNNTPIVVTFMPIVKGWCEERGIAPSKFLIPLSYVTILGGTITVLGTSTNLVVHGML
IDYGYGGFTLFQLAIVGIPITIVGLIYIFTIGSKLLPENKGLQQQIDEDPREYLAELIVDQSFPYANQSIKNAGLRNLKG
LYLIEIIRDKERISPVRPTTIIQTADRLIFTGLIETLRDVQMTKGLTLRTGTDLELRELKNGNSEIVEVVIAHQSSLQSK
TIKQLKFRSKFEAGVIAVHRESERIASKIGDIVLKPGDTLLLLADKDFVRKYKHSKDFYILTSPDTTETLRIDPIKGWFT
IILFFGMIALVTLGVFTMFKAMTMAVVLLLLFKVIKPGEAKKYIHFDVLLLIASSFGIGLAITKTGLAEYIAKGILMLGK
PAGLVILLLLIYILTNIFTEIITNSAAAVLMFPVGMEMARNLHVEPMGFAVIIAIAASASFITPIGYQTNMIVYGPGGYK
FIDYVKIGTPLSLIVMVLTVSIVSYWWY

Specific function: Unknown

COG id: COG0471

COG function: function code P; Di- and tricarboxylate transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 RCK C-terminal domains [H]

Homologues:

Organism=Escherichia coli, GI1788629, Length=582, Percent_Identity=26.6323024054983, Blast_Score=193, Evalue=3e-50,
Organism=Caenorhabditis elegans, GI17551790, Length=146, Percent_Identity=26.7123287671233, Blast_Score=67, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001898
- InterPro:   IPR006037 [H]

Pfam domain/function: PF00939 Na_sulph_symp; PF02080 TrkA_C [H]

EC number: NA

Molecular weight: Translated: 64671; Mature: 64671

Theoretical pI: Translated: 9.40; Mature: 9.40

Prosite motif: PS01271 NA_SULFATE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFVLLMVIAMLGALLFEVASPSIVVFTVLTVFLITGILNPSEALSGFSNEGMITVGLLF
CHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCHHHHHHH
VVAGAVKKSGILEDIMKSWMAGSHRMIDSVARFFIPVSLLSGFLNNTPIVVTFMPIVKGW
HHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHH
CEERGIAPSKFLIPLSYVTILGGTITVLGTSTNLVVHGMLIDYGYGGFTLFQLAIVGIPI
HHHCCCCCCHHHHHHHHHHHHCCEEEEEECCCCEEEEEEEEECCCCHHHHHHHHHHHCHH
TIVGLIYIFTIGSKLLPENKGLQQQIDEDPREYLAELIVDQSFPYANQSIKNAGLRNLKG
HHHHHHHHHHHCHHHCCCCCCHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHHCCHHHCCC
LYLIEIIRDKERISPVRPTTIIQTADRLIFTGLIETLRDVQMTKGLTLRTGTDLELRELK
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHC
NGNSEIVEVVIAHQSSLQSKTIKQLKFRSKFEAGVIAVHRESERIASKIGDIVLKPGDTL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHCCEEECCCCEE
LLLADKDFVRKYKHSKDFYILTSPDTTETLRIDPIKGWFTIILFFGMIALVTLGVFTMFK
EEEECHHHHHHHCCCCCEEEEECCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH
AMTMAVVLLLLFKVIKPGEAKKYIHFDVLLLIASSFGIGLAITKTGLAEYIAKGILMLGK
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHCCC
PAGLVILLLLIYILTNIFTEIITNSAAAVLMFPVGMEMARNLHVEPMGFAVIIAIAASAS
CHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHCCCCCCCHHHHHHHHHHCCC
FITPIGYQTNMIVYGPGGYKFIDYVKIGTPLSLIVMVLTVSIVSYWWY
CCCCCCCCCCEEEECCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIFVLLMVIAMLGALLFEVASPSIVVFTVLTVFLITGILNPSEALSGFSNEGMITVGLLF
CHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCHHHHHHH
VVAGAVKKSGILEDIMKSWMAGSHRMIDSVARFFIPVSLLSGFLNNTPIVVTFMPIVKGW
HHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHH
CEERGIAPSKFLIPLSYVTILGGTITVLGTSTNLVVHGMLIDYGYGGFTLFQLAIVGIPI
HHHCCCCCCHHHHHHHHHHHHCCEEEEEECCCCEEEEEEEEECCCCHHHHHHHHHHHCHH
TIVGLIYIFTIGSKLLPENKGLQQQIDEDPREYLAELIVDQSFPYANQSIKNAGLRNLKG
HHHHHHHHHHHCHHHCCCCCCHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHHCCHHHCCC
LYLIEIIRDKERISPVRPTTIIQTADRLIFTGLIETLRDVQMTKGLTLRTGTDLELRELK
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHC
NGNSEIVEVVIAHQSSLQSKTIKQLKFRSKFEAGVIAVHRESERIASKIGDIVLKPGDTL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHCCEEECCCCEE
LLLADKDFVRKYKHSKDFYILTSPDTTETLRIDPIKGWFTIILFFGMIALVTLGVFTMFK
EEEECHHHHHHHCCCCCEEEEECCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH
AMTMAVVLLLLFKVIKPGEAKKYIHFDVLLLIASSFGIGLAITKTGLAEYIAKGILMLGK
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHCCC
PAGLVILLLLIYILTNIFTEIITNSAAAVLMFPVGMEMARNLHVEPMGFAVIIAIAASAS
CHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHCCCCCCCHHHHHHHHHHCCC
FITPIGYQTNMIVYGPGGYKFIDYVKIGTPLSLIVMVLTVSIVSYWWY
CCCCCCCCCCEEEECCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]