| Definition | Oceanobacillus iheyensis HTE831, complete genome. |
|---|---|
| Accession | NC_004193 |
| Length | 3,630,528 |
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The map label for this gene is ctaE [H]
Identifier: 23098894
GI number: 23098894
Start: 1480377
End: 1481003
Strand: Direct
Name: ctaE [H]
Synonym: OB1439
Alternate gene names: 23098894
Gene position: 1480377-1481003 (Clockwise)
Preceding gene: 23098893
Following gene: 23098895
Centisome position: 40.78
GC content: 36.36
Gene sequence:
>627_bases ATGAGTCATCATGATCATTCCATTGACCCGAAGAATCTAACACAAGACCCTTCAAAAGCAACGATGGAAGGAAAGCATAA GTTTCTTGGTTTGTGGATATTCTTAGGTGGAGAGACCGTCTTATTTGCTTGTTTATTCGGAACTTATCTTGCATTAAAAG ACTCTACTGCTGGTGGTCCATCAACGCATGATTTATATGGTCTAGAGTTGGTCTTTTTAATGACAGTATTACTATTAACA AGCTCCTTAACAAGTGTATATGCTATATACCATATGAAAAATAACGACTTTAAGAAGATGCAATTATGGATGGGTATTAC AGCGGCTTTAGGTCTTGCTTTCTTAGGATTTGAGATTTATGAGTTTGCCCACTATATTCATGATTATGGATTTACATTCC GTTCTTCTGCATTTGGATCCGCGTTTTACGCGCTTGTCGGATTTCACGGAGGCCACGTAGTATTCGGTTTGTCTTGGATT ATTACATTAATGGTCCGAAATGCAAAACGAGGATTGAATCTGTATAATGCACCTAAATATAATACATTTGCATTATACTG GCACTTTATAGACGTTGTTTGGGTATTTATTTTTACAGTTGTTTATTTAATGGGGATGGTGAGTTAA
Upstream 100 bases:
>100_bases GGAATGGCAATTGGTATGGGTTGTATGTTAATTCGTTCTTTAAGAGACGATCACGGTTATCATATCTCTAAAGAAGAAGT AGAAAGGGAGGGTGATTGAT
Downstream 100 bases:
>100_bases TTTATGACGGATAATATGAGTACCAGAAAAATTAATTCGTTCCAAAAAGCTAAAAATAAAGAAGAAATGAAAAAACAAAT TGTTACGTTTGCTTTGATGA
Product: cytochrome c oxidase subunit III
Products: NA
Alternate protein names: Cytochrome aa3 subunit 3; Cytochrome c oxidase polypeptide III; Oxidase aa(3) subunit 3 [H]
Number of amino acids: Translated: 208; Mature: 207
Protein sequence:
>208_residues MSHHDHSIDPKNLTQDPSKATMEGKHKFLGLWIFLGGETVLFACLFGTYLALKDSTAGGPSTHDLYGLELVFLMTVLLLT SSLTSVYAIYHMKNNDFKKMQLWMGITAALGLAFLGFEIYEFAHYIHDYGFTFRSSAFGSAFYALVGFHGGHVVFGLSWI ITLMVRNAKRGLNLYNAPKYNTFALYWHFIDVVWVFIFTVVYLMGMVS
Sequences:
>Translated_208_residues MSHHDHSIDPKNLTQDPSKATMEGKHKFLGLWIFLGGETVLFACLFGTYLALKDSTAGGPSTHDLYGLELVFLMTVLLLT SSLTSVYAIYHMKNNDFKKMQLWMGITAALGLAFLGFEIYEFAHYIHDYGFTFRSSAFGSAFYALVGFHGGHVVFGLSWI ITLMVRNAKRGLNLYNAPKYNTFALYWHFIDVVWVFIFTVVYLMGMVS >Mature_207_residues SHHDHSIDPKNLTQDPSKATMEGKHKFLGLWIFLGGETVLFACLFGTYLALKDSTAGGPSTHDLYGLELVFLMTVLLLTS SLTSVYAIYHMKNNDFKKMQLWMGITAALGLAFLGFEIYEFAHYIHDYGFTFRSSAFGSAFYALVGFHGGHVVFGLSWII TLMVRNAKRGLNLYNAPKYNTFALYWHFIDVVWVFIFTVVYLMGMVS
Specific function: Cytochrome O Terminal Oxidase Complex Is The Component Of The Aerobic Respiratory Chain Of E.Coli That Predominates When Cells Are Grown At High Aeration. [C]
COG id: COG1845
COG function: function code C; Heme/copper-type cytochrome/quinol oxidase, subunit 3
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytochrome c oxidase subunit 3 family [H]
Homologues:
Organism=Homo sapiens, GI251831113, Length=142, Percent_Identity=30.2816901408451, Blast_Score=68, Evalue=6e-12, Organism=Escherichia coli, GI1786633, Length=200, Percent_Identity=44, Blast_Score=152, Evalue=2e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000298 - InterPro: IPR013833 [H]
Pfam domain/function: PF00510 COX3 [H]
EC number: =1.9.3.1 [H]
Molecular weight: Translated: 23529; Mature: 23397
Theoretical pI: Translated: 7.88; Mature: 7.88
Prosite motif: PS50253 COX3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHHDHSIDPKNLTQDPSKATMEGKHKFLGLWIFLGGETVLFACLFGTYLALKDSTAGGP CCCCCCCCCCCCCCCCCCHHHHCCCHHEEEEEEEECCHHHHHHHHHHHHHHEECCCCCCC STHDLYGLELVFLMTVLLLTSSLTSVYAIYHMKNNDFKKMQLWMGITAALGLAFLGFEIY CCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH EFAHYIHDYGFTFRSSAFGSAFYALVGFHGGHVVFGLSWIITLMVRNAKRGLNLYNAPKY HHHHHHHHHCCHHHCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC NTFALYWHFIDVVWVFIFTVVYLMGMVS CHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SHHDHSIDPKNLTQDPSKATMEGKHKFLGLWIFLGGETVLFACLFGTYLALKDSTAGGP CCCCCCCCCCCCCCCCCHHHHCCCHHEEEEEEEECCHHHHHHHHHHHHHHEECCCCCCC STHDLYGLELVFLMTVLLLTSSLTSVYAIYHMKNNDFKKMQLWMGITAALGLAFLGFEIY CCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH EFAHYIHDYGFTFRSSAFGSAFYALVGFHGGHVVFGLSWIITLMVRNAKRGLNLYNAPKY HHHHHHHHHCCHHHCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC NTFALYWHFIDVVWVFIFTVVYLMGMVS CHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 1964459 [H]