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The map label for this gene is yqjN [H]

Identifier: 23098811

GI number: 23098811

Start: 1402304

End: 1403911

Strand: Direct

Name: yqjN [H]

Synonym: OB1356

Alternate gene names: 23098811

Gene position: 1402304-1403911 (Clockwise)

Preceding gene: 23098810

Following gene: 23098813

Centisome position: 38.63

GC content: 36.69

Gene sequence:

>1608_bases
ATGACGAAATTACAATGGAATAGCCCTAGTCAGTTAAGGACTTTGTTAAATGAGTTAGTAGGTTGGAAAAGTATAACGTT
GTCTGAAGGAGAACGTCAATTTCCGATGAAACTTTATGCGAAGTTACAGGATTTAGATTATTTTCATCAATATCCAGATC
GTTTGTCTTTGCATGAAGCAGATGAACGTAGAAAATTATTAACTGCTGTCTATAAGCATCCAGATGCTACACAAACGATT
TGTCTTATTAGTCATTTTGACACTGTGAATACAGAAGAATACGGATCTATGGAACCGCTTGCTACACAACCCGAAGAACT
TACTAAATTGTATATGGAAAATAAAGAAGAGTTACCGTTTGAGATTCATCAAGATTTGGAATCGGAAGCTTTTTTATTTG
GTAGGGGAACCATGGATATGAAGATGGGGCTAGTGATGCATATGAGCTTGATTGAGCAAGCGAGTATAGAAGAGTGGCCG
ATTAATCTTGTACTATTAACAGTTCCAGATGAAGAGGTAAATTCATCCGGGATGCGTTATGCAGTACCTGTGTTGGTTGA
GTTACAGAAAAAATTTGGTTTTACATACACATTATTTTTAAATAGTGAGCCGACGTTTCGACAAGAGCCAACAGATAATT
CGCATTATATTTATACGGGTACTATAGGGAAGGTGCTGGCAGCTGCTTTATTTTATGGTAAGGAGACACATGCTGGGGAG
CCGTTAAGTGGTATGACTTCGCCTTTTATGGCTTCATATTTGACGCAAGAAATGGAGTGGAATGCTAAATTTAAAGAAAT
GGTAAGAGGTGAGTCTACACCATTGCCAGTCACGTTACAACAAACCGATCTGCGTTTACGTTATTCGACCCAGACACCAT
ATCGTTCTTCTGCGCTATATAATTTATTTTTAATGGAACGAAGTACGAAGGAAGCTTTTGACTTATTTGAGGAAGTTGCG
ACCGATGCTGCAAACAAGTGTACAGAAGCCTATAATGAAGTTTGTAGGCAACAAGTAGTGCCACCAATAGGAAAGGTAAA
AGTAATTCGCTATAAGGATTTATTAGAATATGCGACAGATAAATTAGGTGAATCTATCATTCAAGAGATTAAAGCCGATA
TTTATTATAATGATGAATGGGATGATAGAGAAAAATCACTTCGAATTACGGATCAATTAATGATTCGTTGTCAAGAATTG
GCACCAGCGATGATCATCTTATTTGCACCACCGTATTATCCGGCTGTTAACTCATCTGACAATAGTTTAGTAAAAGAATG
TACGGCATTTTTAACCAAAAAAGCAAAAGAAGATTTTCAATTGGATATTAAACAGATTCATTATTTAAATGGTATTTGTG
ATTTAAGTTATGTGAATTATTCGGAAGACCTTTCTGGATGGGATGAATATGAACAAAACACACCTGTTTGGGGAGATACG
TACCATCTTCCTTTTGATGAGATGAGTCAGCTACGAGCACCAGTAATTAATGTAGGTCCATTTGGGTATGATGCACATAA
ACGTACGGAAAGATTACACATTGTTAATGCGTTCGAACAGTTCCCGAAGATGCTCAGAGAATTAGTAGGGTATATATCAA
ATAAATAA

Upstream 100 bases:

>100_bases
CGATATTTTTGTATTTGTTATCTTCTGAAAAAACATGTAAATCAGTCTTTTACCTGCTATAATAATACGTATAGAAACAA
GGGTAAAAGGGGGATTTTAT

Downstream 100 bases:

>100_bases
CGTATGAAAACCTTAAATGAGTTAAATAATCGTGCAATTGCTGCCGCAGTCGTTTTTTAGTCATGTTAAGTTAAATTGTT
GTCTTTGGAACTTTGATTCA

Product: amino acid degradation

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 535; Mature: 534

Protein sequence:

>535_residues
MTKLQWNSPSQLRTLLNELVGWKSITLSEGERQFPMKLYAKLQDLDYFHQYPDRLSLHEADERRKLLTAVYKHPDATQTI
CLISHFDTVNTEEYGSMEPLATQPEELTKLYMENKEELPFEIHQDLESEAFLFGRGTMDMKMGLVMHMSLIEQASIEEWP
INLVLLTVPDEEVNSSGMRYAVPVLVELQKKFGFTYTLFLNSEPTFRQEPTDNSHYIYTGTIGKVLAAALFYGKETHAGE
PLSGMTSPFMASYLTQEMEWNAKFKEMVRGESTPLPVTLQQTDLRLRYSTQTPYRSSALYNLFLMERSTKEAFDLFEEVA
TDAANKCTEAYNEVCRQQVVPPIGKVKVIRYKDLLEYATDKLGESIIQEIKADIYYNDEWDDREKSLRITDQLMIRCQEL
APAMIILFAPPYYPAVNSSDNSLVKECTAFLTKKAKEDFQLDIKQIHYLNGICDLSYVNYSEDLSGWDEYEQNTPVWGDT
YHLPFDEMSQLRAPVINVGPFGYDAHKRTERLHIVNAFEQFPKMLRELVGYISNK

Sequences:

>Translated_535_residues
MTKLQWNSPSQLRTLLNELVGWKSITLSEGERQFPMKLYAKLQDLDYFHQYPDRLSLHEADERRKLLTAVYKHPDATQTI
CLISHFDTVNTEEYGSMEPLATQPEELTKLYMENKEELPFEIHQDLESEAFLFGRGTMDMKMGLVMHMSLIEQASIEEWP
INLVLLTVPDEEVNSSGMRYAVPVLVELQKKFGFTYTLFLNSEPTFRQEPTDNSHYIYTGTIGKVLAAALFYGKETHAGE
PLSGMTSPFMASYLTQEMEWNAKFKEMVRGESTPLPVTLQQTDLRLRYSTQTPYRSSALYNLFLMERSTKEAFDLFEEVA
TDAANKCTEAYNEVCRQQVVPPIGKVKVIRYKDLLEYATDKLGESIIQEIKADIYYNDEWDDREKSLRITDQLMIRCQEL
APAMIILFAPPYYPAVNSSDNSLVKECTAFLTKKAKEDFQLDIKQIHYLNGICDLSYVNYSEDLSGWDEYEQNTPVWGDT
YHLPFDEMSQLRAPVINVGPFGYDAHKRTERLHIVNAFEQFPKMLRELVGYISNK
>Mature_534_residues
TKLQWNSPSQLRTLLNELVGWKSITLSEGERQFPMKLYAKLQDLDYFHQYPDRLSLHEADERRKLLTAVYKHPDATQTIC
LISHFDTVNTEEYGSMEPLATQPEELTKLYMENKEELPFEIHQDLESEAFLFGRGTMDMKMGLVMHMSLIEQASIEEWPI
NLVLLTVPDEEVNSSGMRYAVPVLVELQKKFGFTYTLFLNSEPTFRQEPTDNSHYIYTGTIGKVLAAALFYGKETHAGEP
LSGMTSPFMASYLTQEMEWNAKFKEMVRGESTPLPVTLQQTDLRLRYSTQTPYRSSALYNLFLMERSTKEAFDLFEEVAT
DAANKCTEAYNEVCRQQVVPPIGKVKVIRYKDLLEYATDKLGESIIQEIKADIYYNDEWDDREKSLRITDQLMIRCQELA
PAMIILFAPPYYPAVNSSDNSLVKECTAFLTKKAKEDFQLDIKQIHYLNGICDLSYVNYSEDLSGWDEYEQNTPVWGDTY
HLPFDEMSQLRAPVINVGPFGYDAHKRTERLHIVNAFEQFPKMLRELVGYISNK

Specific function: Unknown

COG id: COG4187

COG function: function code E; Arginine degradation protein (predicted deacylase)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis rocB [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002933
- InterPro:   IPR012166 [H]

Pfam domain/function: PF01546 Peptidase_M20 [H]

EC number: NA

Molecular weight: Translated: 61914; Mature: 61783

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKLQWNSPSQLRTLLNELVGWKSITLSEGERQFPMKLYAKLQDLDYFHQYPDRLSLHEA
CCCCCCCCHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHH
DERRKLLTAVYKHPDATQTICLISHFDTVNTEEYGSMEPLATQPEELTKLYMENKEELPF
HHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCH
EIHQDLESEAFLFGRGTMDMKMGLVMHMSLIEQASIEEWPINLVLLTVPDEEVNSSGMRY
HHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCEE
AVPVLVELQKKFGFTYTLFLNSEPTFRQEPTDNSHYIYTGTIGKVLAAALFYGKETHAGE
HHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHCCCCCCCC
PLSGMTSPFMASYLTQEMEWNAKFKEMVRGESTPLPVTLQQTDLRLRYSTQTPYRSSALY
CCCCCCHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCEEEECCCEEEEECCCCCCCHHHHH
NLFLMERSTKEAFDLFEEVATDAANKCTEAYNEVCRQQVVPPIGKVKVIRYKDLLEYATD
EEEEHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHH
KLGESIIQEIKADIYYNDEWDDREKSLRITDQLMIRCQELAPAMIILFAPPYYPAVNSSD
HHHHHHHHHHHHCEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCC
NSLVKECTAFLTKKAKEDFQLDIKQIHYLNGICDLSYVNYSEDLSGWDEYEQNTPVWGDT
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEECCCHHHCCCCHHHCCCCCCCCCE
YHLPFDEMSQLRAPVINVGPFGYDAHKRTERLHIVNAFEQFPKMLRELVGYISNK
EECCHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TKLQWNSPSQLRTLLNELVGWKSITLSEGERQFPMKLYAKLQDLDYFHQYPDRLSLHEA
CCCCCCCHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHH
DERRKLLTAVYKHPDATQTICLISHFDTVNTEEYGSMEPLATQPEELTKLYMENKEELPF
HHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCH
EIHQDLESEAFLFGRGTMDMKMGLVMHMSLIEQASIEEWPINLVLLTVPDEEVNSSGMRY
HHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCEE
AVPVLVELQKKFGFTYTLFLNSEPTFRQEPTDNSHYIYTGTIGKVLAAALFYGKETHAGE
HHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHCCCCCCCC
PLSGMTSPFMASYLTQEMEWNAKFKEMVRGESTPLPVTLQQTDLRLRYSTQTPYRSSALY
CCCCCCHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCEEEECCCEEEEECCCCCCCHHHHH
NLFLMERSTKEAFDLFEEVATDAANKCTEAYNEVCRQQVVPPIGKVKVIRYKDLLEYATD
EEEEHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHH
KLGESIIQEIKADIYYNDEWDDREKSLRITDQLMIRCQELAPAMIILFAPPYYPAVNSSD
HHHHHHHHHHHHCEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCC
NSLVKECTAFLTKKAKEDFQLDIKQIHYLNGICDLSYVNYSEDLSGWDEYEQNTPVWGDT
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEECCCHHHCCCCHHHCCCCCCCCCE
YHLPFDEMSQLRAPVINVGPFGYDAHKRTERLHIVNAFEQFPKMLRELVGYISNK
EECCHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]