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The map label for this gene is ykgB [H]

Identifier: 23098810

GI number: 23098810

Start: 1400969

End: 1402006

Strand: Direct

Name: ykgB [H]

Synonym: OB1355

Alternate gene names: 23098810

Gene position: 1400969-1402006 (Clockwise)

Preceding gene: 23098807

Following gene: 23098811

Centisome position: 38.59

GC content: 36.9

Gene sequence:

>1038_bases
ATGGCAGAGAAAAAAACATTTATAGGTTTTGCAGGCACATATACTAGAAAAACAAGTAAAGGTATTTACCGATTTTCATT
AAATGTGGACTCAAAACAATTAGAGAAAGTAGAATTAGCAGCACGAGTAGATAACCCAACGTATTTGACTATATCTGATG
ATCAAAAGCATCTATATTCGATCGCGCAAGAAGGAGAAATGGGTGGCGTTCAATCTTTTAACATCTCTTCAGAAGATGGA
GAATTAAAGTTGATAAATGGTCAATTAGTAGAAGGGGCTCCGCCTTGTCATCTTGATGTGCATAGTGAAGTATTGGTTAC
TGGTAATTATCATAAAGGGGATATAGGATTACACCATCTTGATAATGCTCAAGTAGAACAAGGTAAATTTTTAAAGCATG
AAGGGGATGGCCCTCATAAAAGACAAGAAAAACCACATGTTCATTACACAGGATTTACACCAGACGGAAGATATGTGGTT
GTAGCAGATTTAGGTACAGATGAACTTGTCACTTATCGCATAGAGGATGAATCCTTAATACATGTGAGTACCTTACATGT
TGCGCCAGGAAGCGGACCGCGTCATATTGTTTTCCATCCAAATAAGTCCGTAGCCTATTTATTAACAGAATTAAGTTCAG
AAGTAATTGTTCTTGATTATAATAAAGAAACAGGGCAGTTTAACCAAAAGCAAACGATAAAAGCAATTCCTGAATCTTTT
AATGATACAAATGATGCGAGTGCGATTCATATTTCTTCAGATGGTAAATTTATCTATACTGGAAATAGAGGGCACAACAG
TATTGCTGTATTTTCTGTTGATGAACGTTCAGGGGAGTTAACATTGGTGGAAATTACCCCATCAGGAGGGGAATGGCCAC
GAGACTTCGTGTTGGATCCAACAGAACAATTTCTTATAGCATCTAATCAACATAGTGGAAATATTGTTTTATTCGAACGC
GACACTGCAACTGGGAAGTTATCACCAGCAAATAGCGAAATTGAAGTACCTGAAGTGGTGTGTGTGAAATTTTTATAG

Upstream 100 bases:

>100_bases
TTACTAGAAGATAACTTCGAAAAAGGTTACGATAAACACAATACAAATTTTAACAATGTACTTCGTTCAGATAATAATTG
ATTTTAAGGAGGCGTTCATA

Downstream 100 bases:

>100_bases
TTTAATTTAAATAATCTACTAAAATTAGTGGGTAAGATCATCGACGGATGATTTTGCCCACTATTTTGCTTTTTAGGAGT
AAAGTAAGAGGTGAAAGAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 345; Mature: 344

Protein sequence:

>345_residues
MAEKKTFIGFAGTYTRKTSKGIYRFSLNVDSKQLEKVELAARVDNPTYLTISDDQKHLYSIAQEGEMGGVQSFNISSEDG
ELKLINGQLVEGAPPCHLDVHSEVLVTGNYHKGDIGLHHLDNAQVEQGKFLKHEGDGPHKRQEKPHVHYTGFTPDGRYVV
VADLGTDELVTYRIEDESLIHVSTLHVAPGSGPRHIVFHPNKSVAYLLTELSSEVIVLDYNKETGQFNQKQTIKAIPESF
NDTNDASAIHISSDGKFIYTGNRGHNSIAVFSVDERSGELTLVEITPSGGEWPRDFVLDPTEQFLIASNQHSGNIVLFER
DTATGKLSPANSEIEVPEVVCVKFL

Sequences:

>Translated_345_residues
MAEKKTFIGFAGTYTRKTSKGIYRFSLNVDSKQLEKVELAARVDNPTYLTISDDQKHLYSIAQEGEMGGVQSFNISSEDG
ELKLINGQLVEGAPPCHLDVHSEVLVTGNYHKGDIGLHHLDNAQVEQGKFLKHEGDGPHKRQEKPHVHYTGFTPDGRYVV
VADLGTDELVTYRIEDESLIHVSTLHVAPGSGPRHIVFHPNKSVAYLLTELSSEVIVLDYNKETGQFNQKQTIKAIPESF
NDTNDASAIHISSDGKFIYTGNRGHNSIAVFSVDERSGELTLVEITPSGGEWPRDFVLDPTEQFLIASNQHSGNIVLFER
DTATGKLSPANSEIEVPEVVCVKFL
>Mature_344_residues
AEKKTFIGFAGTYTRKTSKGIYRFSLNVDSKQLEKVELAARVDNPTYLTISDDQKHLYSIAQEGEMGGVQSFNISSEDGE
LKLINGQLVEGAPPCHLDVHSEVLVTGNYHKGDIGLHHLDNAQVEQGKFLKHEGDGPHKRQEKPHVHYTGFTPDGRYVVV
ADLGTDELVTYRIEDESLIHVSTLHVAPGSGPRHIVFHPNKSVAYLLTELSSEVIVLDYNKETGQFNQKQTIKAIPESFN
DTNDASAIHISSDGKFIYTGNRGHNSIAVFSVDERSGELTLVEITPSGGEWPRDFVLDPTEQFLIASNQHSGNIVLFERD
TATGKLSPANSEIEVPEVVCVKFL

Specific function: Unknown

COG id: COG2706

COG function: function code G; 3-carboxymuconate cyclase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cycloisomerase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1786983, Length=280, Percent_Identity=30.3571428571429, Blast_Score=117, Evalue=1e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011048
- InterPro:   IPR019405
- InterPro:   IPR015943 [H]

Pfam domain/function: PF10282 DUF2394 [H]

EC number: NA

Molecular weight: Translated: 38127; Mature: 37996

Theoretical pI: Translated: 5.36; Mature: 5.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEKKTFIGFAGTYTRKTSKGIYRFSLNVDSKQLEKVELAARVDNPTYLTISDDQKHLYS
CCCCEEEEEEEEEEECCCCCCEEEEEECCCHHHHHEEEEEEECCCCEEEEEECCHHHHHH
IAQEGEMGGVQSFNISSEDGELKLINGQLVEGAPPCHLDVHSEVLVTGNYHKGDIGLHHL
HHHCCCCCCEEEEECCCCCCCEEEECCEEECCCCCCEEECCCEEEEECCCCCCCCCEEEC
DNAQVEQGKFLKHEGDGPHKRQEKPHVHYTGFTPDGRYVVVADLGTDELVTYRIEDESLI
CCCCCCCCCEEEECCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCEEEEEECCCCEE
HVSTLHVAPGSGPRHIVFHPNKSVAYLLTELSSEVIVLDYNKETGQFNQKQTIKAIPESF
EEEEEEECCCCCCEEEEECCCCCCEEEEECCCCCEEEEEECCCCCCCCCHHHHHHHHHHC
NDTNDASAIHISSDGKFIYTGNRGHNSIAVFSVDERSGELTLVEITPSGGEWPRDFVLDP
CCCCCCCEEEEECCCCEEEECCCCCCEEEEEEECCCCCCEEEEEECCCCCCCCCCCEECC
TEQFLIASNQHSGNIVLFERDTATGKLSPANSEIEVPEVVCVKFL
CHHEEEEECCCCCCEEEEECCCCCCEECCCCCCCCCCEEEEEEEC
>Mature Secondary Structure 
AEKKTFIGFAGTYTRKTSKGIYRFSLNVDSKQLEKVELAARVDNPTYLTISDDQKHLYS
CCCEEEEEEEEEEECCCCCCEEEEEECCCHHHHHEEEEEEECCCCEEEEEECCHHHHHH
IAQEGEMGGVQSFNISSEDGELKLINGQLVEGAPPCHLDVHSEVLVTGNYHKGDIGLHHL
HHHCCCCCCEEEEECCCCCCCEEEECCEEECCCCCCEEECCCEEEEECCCCCCCCCEEEC
DNAQVEQGKFLKHEGDGPHKRQEKPHVHYTGFTPDGRYVVVADLGTDELVTYRIEDESLI
CCCCCCCCCEEEECCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCEEEEEECCCCEE
HVSTLHVAPGSGPRHIVFHPNKSVAYLLTELSSEVIVLDYNKETGQFNQKQTIKAIPESF
EEEEEEECCCCCCEEEEECCCCCCEEEEECCCCCEEEEEECCCCCCCCCHHHHHHHHHHC
NDTNDASAIHISSDGKFIYTGNRGHNSIAVFSVDERSGELTLVEITPSGGEWPRDFVLDP
CCCCCCCEEEEECCCCEEEECCCCCCEEEEEEECCCCCCEEEEEECCCCCCCCCCCEECC
TEQFLIASNQHSGNIVLFERDTATGKLSPANSEIEVPEVVCVKFL
CHHEEEEECCCCCCEEEEECCCCCCEECCCCCCCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]