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The map label for this gene is ygaJ [H]

Identifier: 23098743

GI number: 23098743

Start: 1329276

End: 1329971

Strand: Direct

Name: ygaJ [H]

Synonym: OB1288

Alternate gene names: 23098743

Gene position: 1329276-1329971 (Clockwise)

Preceding gene: 23098742

Following gene: 23098754

Centisome position: 36.61

GC content: 35.2

Gene sequence:

>696_bases
ATGAGACAAATAATTGCTTTAGGAGGTGGGGGTTTTTCTATGGAGCCGGAAAATTTTTTACTAGATAAATACATACTAGA
TCAATCTAATAATTCGAACCCGAAAGTAATGTTTCTCCCCACTGCTAGCGGAGACGCAGATAATTATATTGAAAGGTTCT
ATCAGTCATTTCGAAAACTGGAATGCATACCGTCACATTTATCCTTATTTAAACCACCAATGCGAGATATACAAAATTAT
ATTTTAGAAAAAGACATTATTTATGTTGGAGGTGGTAACACAAAAAATATGTTAGCACTTTGGAGAGATTGGGAGATAGT
ACCTGTTTTAGAAAGAGCTTGGAATTCTGGTATTGTATTGGCGGGGATTAGTGCTGGATCCATCTGTTGGTTTGAAGAGG
GAGCAACCGATTCATATGGAGAAGATTTAGAAATGATTAAAGCTCTTGGGTTTTTGAAAGGTAGTAATTGTCCGCATTAT
GATGGGGAAAAAAATAGAAGACCAATTTATCAATATTTAATTGAGAGTCAACAAATAAAGTCTGGTTATGGGGTGGATGA
TGGTGTAGCGCTACATTTCGTAGGTACTGACCTTCAATCTATTGTTAGTTCTAGACCAAGCAGCAGTGCCTATAAAGTAT
TTTTGGAAGATAACAAAGTAATGGAGAAAACATTAAAAGTAAATTATTTAGGGTGA

Upstream 100 bases:

>100_bases
GTATTCATACATTACTGTACATCGTTGCAGGGATTATGTGTTTTGTTAGAAAACCGAAAAATAATATTGCAGTTTAGAAC
AGGGGGGAGGAGGTGTAATT

Downstream 100 bases:

>100_bases
AGAAAAAGGAGAATTTGATGAACTATATGGTAACTTTTAGTGGAATCGGACTGCTTTTGTTATTATTGAAGGAGTTTTCC
TTTTAAGAGAAGAGTGGGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 231; Mature: 231

Protein sequence:

>231_residues
MRQIIALGGGGFSMEPENFLLDKYILDQSNNSNPKVMFLPTASGDADNYIERFYQSFRKLECIPSHLSLFKPPMRDIQNY
ILEKDIIYVGGGNTKNMLALWRDWEIVPVLERAWNSGIVLAGISAGSICWFEEGATDSYGEDLEMIKALGFLKGSNCPHY
DGEKNRRPIYQYLIESQQIKSGYGVDDGVALHFVGTDLQSIVSSRPSSSAYKVFLEDNKVMEKTLKVNYLG

Sequences:

>Translated_231_residues
MRQIIALGGGGFSMEPENFLLDKYILDQSNNSNPKVMFLPTASGDADNYIERFYQSFRKLECIPSHLSLFKPPMRDIQNY
ILEKDIIYVGGGNTKNMLALWRDWEIVPVLERAWNSGIVLAGISAGSICWFEEGATDSYGEDLEMIKALGFLKGSNCPHY
DGEKNRRPIYQYLIESQQIKSGYGVDDGVALHFVGTDLQSIVSSRPSSSAYKVFLEDNKVMEKTLKVNYLG
>Mature_231_residues
MRQIIALGGGGFSMEPENFLLDKYILDQSNNSNPKVMFLPTASGDADNYIERFYQSFRKLECIPSHLSLFKPPMRDIQNY
ILEKDIIYVGGGNTKNMLALWRDWEIVPVLERAWNSGIVLAGISAGSICWFEEGATDSYGEDLEMIKALGFLKGSNCPHY
DGEKNRRPIYQYLIESQQIKSGYGVDDGVALHFVGTDLQSIVSSRPSSSAYKVFLEDNKVMEKTLKVNYLG

Specific function: Unknown

COG id: COG3340

COG function: function code E; Peptidase E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S51 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005320 [H]

Pfam domain/function: PF03575 Peptidase_S51 [H]

EC number: NA

Molecular weight: Translated: 26003; Mature: 26003

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQIIALGGGGFSMEPENFLLDKYILDQSNNSNPKVMFLPTASGDADNYIERFYQSFRKL
CCEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHH
ECIPSHLSLFKPPMRDIQNYILEKDIIYVGGGNTKNMLALWRDWEIVPVLERAWNSGIVL
HHCHHHHHHCCCCHHHHHHHHHHCCEEEECCCCCCCEEEEECCCCEEHHHHHCCCCCEEE
AGISAGSICWFEEGATDSYGEDLEMIKALGFLKGSNCPHYDGEKNRRPIYQYLIESQQIK
EECCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHH
SGYGVDDGVALHFVGTDLQSIVSSRPSSSAYKVFLEDNKVMEKTLKVNYLG
CCCCCCCCEEEEEECCCHHHHHHCCCCCCEEEEEECCCHHHHHHEEEECCC
>Mature Secondary Structure
MRQIIALGGGGFSMEPENFLLDKYILDQSNNSNPKVMFLPTASGDADNYIERFYQSFRKL
CCEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHH
ECIPSHLSLFKPPMRDIQNYILEKDIIYVGGGNTKNMLALWRDWEIVPVLERAWNSGIVL
HHCHHHHHHCCCCHHHHHHHHHHCCEEEECCCCCCCEEEEECCCCEEHHHHHCCCCCEEE
AGISAGSICWFEEGATDSYGEDLEMIKALGFLKGSNCPHYDGEKNRRPIYQYLIESQQIK
EECCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHH
SGYGVDDGVALHFVGTDLQSIVSSRPSSSAYKVFLEDNKVMEKTLKVNYLG
CCCCCCCCEEEEEECCCHHHHHHCCCCCCEEEEEECCCHHHHHHEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9202460; 9384377 [H]