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The map label for this gene is bdlA [H]

Identifier: 23098712

GI number: 23098712

Start: 1301691

End: 1302599

Strand: Direct

Name: bdlA [H]

Synonym: OB1257

Alternate gene names: 23098712

Gene position: 1301691-1302599 (Clockwise)

Preceding gene: 23098710

Following gene: 23098713

Centisome position: 35.85

GC content: 32.23

Gene sequence:

>909_bases
ATGACATTAATGGAAAATAAAGATAAAATGGATAACTTGGTTGTACAAGCATTAGAAAGTAATCTTGCAATTATTCGATT
TGACTTAACTAAGAGAGTAGCTTTTGTAAATGATAATTTTGCAGAAGCATTGGGATATAAAAGAGAAGAGTTACTGGGAA
TGCATCATCATATGTTCTGTTTTGATACGTTCGTACAAAGTGAAGATTACGAATTATTTTGGAATCGTTTATTTTCTGGA
AAATCTTATCAAAATAAGATAAAGAGAAAAGATGCAAATGGAAAGCCAATTTGGCTTGAAGTTACATATATGCCGGTATT
TGATGAAGATAATAAAGTGGTAGCTATTTCAAAGATAGCTACCAATGTGACGGAGCGTGAAGAAAAAGTTCAATCATTAG
CATATGAGTTTAAAGAAGTTGCTCAAGGTATCAATGAAAAAAGTACTTCGGGAACAAAGAATATACATTTATTAACCGAA
AGTTTTCAATCTGTATCAGAAATTATGGATAAAAATGGAGAAATGATAACAACATTTTTGGCGCAAACGGATGAGATTAA
CAGTATTGTCACTACGGTGAAGCGGATTGCGAGACAAACAAAATTATTAGCTCTAAATGCTGCTATAGAAGCGGCACATG
CCGGAGAATTTGGGAAGGGATTTAATGTAGTAGCAAACGAAGTCAAAAAATTAGCGGGCGATGTAGAAGATTCCGTGGTT
GATATTAGCAATATAGTAGATGCCATAACGAATGGATCTCATCAGATAAAAGATGGAGCTTTACAGATAGAAGTAAATAT
TGAGAATAGTCAAGACCATTTGAATCGAACAATAGAAGACTTTGAAGAAATTTCATCAACTTCTCAAATATTAAATGAGA
GATCGAATTCATTTAATAATCTTTTTTAA

Upstream 100 bases:

>100_bases
TACCTTTCAATAACTCTAAATTTTATAGAAATGGACTTAATTGTTTGAAATTAAGATAATTAGGGTAGGTATAACTGACT
AGATGAAGAGGAGCAATTTT

Downstream 100 bases:

>100_bases
CGATATAACCCAACCGCTAATATACGATGTATAGAAGCGGTTATTTAATACCTAACTTTACATATAGACGATGAATTTTA
CTTAAGGGATTTTGGAACAT

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: Chemotaxis regulator BdlA [H]

Number of amino acids: Translated: 302; Mature: 301

Protein sequence:

>302_residues
MTLMENKDKMDNLVVQALESNLAIIRFDLTKRVAFVNDNFAEALGYKREELLGMHHHMFCFDTFVQSEDYELFWNRLFSG
KSYQNKIKRKDANGKPIWLEVTYMPVFDEDNKVVAISKIATNVTEREEKVQSLAYEFKEVAQGINEKSTSGTKNIHLLTE
SFQSVSEIMDKNGEMITTFLAQTDEINSIVTTVKRIARQTKLLALNAAIEAAHAGEFGKGFNVVANEVKKLAGDVEDSVV
DISNIVDAITNGSHQIKDGALQIEVNIENSQDHLNRTIEDFEEISSTSQILNERSNSFNNLF

Sequences:

>Translated_302_residues
MTLMENKDKMDNLVVQALESNLAIIRFDLTKRVAFVNDNFAEALGYKREELLGMHHHMFCFDTFVQSEDYELFWNRLFSG
KSYQNKIKRKDANGKPIWLEVTYMPVFDEDNKVVAISKIATNVTEREEKVQSLAYEFKEVAQGINEKSTSGTKNIHLLTE
SFQSVSEIMDKNGEMITTFLAQTDEINSIVTTVKRIARQTKLLALNAAIEAAHAGEFGKGFNVVANEVKKLAGDVEDSVV
DISNIVDAITNGSHQIKDGALQIEVNIENSQDHLNRTIEDFEEISSTSQILNERSNSFNNLF
>Mature_301_residues
TLMENKDKMDNLVVQALESNLAIIRFDLTKRVAFVNDNFAEALGYKREELLGMHHHMFCFDTFVQSEDYELFWNRLFSGK
SYQNKIKRKDANGKPIWLEVTYMPVFDEDNKVVAISKIATNVTEREEKVQSLAYEFKEVAQGINEKSTSGTKNIHLLTES
FQSVSEIMDKNGEMITTFLAQTDEINSIVTTVKRIARQTKLLALNAAIEAAHAGEFGKGFNVVANEVKKLAGDVEDSVVD
ISNIVDAITNGSHQIKDGALQIEVNIENSQDHLNRTIEDFEEISSTSQILNERSNSFNNLF

Specific function: Essential for biofilm dispersion by sensing environmental cues. May be involved in sensing and transducing signals within cells, resulting in the modulation of c-di-GMP levels, swimming motility and adhesiveness of the bacterial cell surface [H]

COG id: COG2202

COG function: function code T; FOG: PAS/PAC domain

Gene ontology:

Cell location: Integral Membrane. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 PAS (PER-ARNT-SIM) domains [H]

Homologues:

Organism=Escherichia coli, GI1789453, Length=135, Percent_Identity=34.8148148148148, Blast_Score=72, Evalue=6e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013656
- InterPro:   IPR013655 [H]

Pfam domain/function: PF00015 MCPsignal; PF08447 PAS_3; PF08448 PAS_4 [H]

EC number: NA

Molecular weight: Translated: 34157; Mature: 34026

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: PS50112 PAS ; PS50113 PAC ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLMENKDKMDNLVVQALESNLAIIRFDLTKRVAFVNDNFAEALGYKREELLGMHHHMFC
CCCCCCHHHHHHHHHHHHHCCCEEEEEEHHHHEEEECCCHHHHHCCCHHHHHHHHHHHHH
FDTFVQSEDYELFWNRLFSGKSYQNKIKRKDANGKPIWLEVTYMPVFDEDNKVVAISKIA
HHHHHCCCCHHHHHHHHHCCCHHHHHHHHCCCCCCEEEEEEEEEEEECCCCCEEEEHHHH
TNVTEREEKVQSLAYEFKEVAQGINEKSTSGTKNIHLLTESFQSVSEIMDKNGEMITTFL
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHHHHCCCCEEEHHH
AQTDEINSIVTTVKRIARQTKLLALNAAIEAAHAGEFGKGFNVVANEVKKLAGDVEDSVV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHH
DISNIVDAITNGSHQIKDGALQIEVNIENSQDHLNRTIEDFEEISSTSQILNERSNSFNN
HHHHHHHHHHCCCCEECCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
LF
CC
>Mature Secondary Structure 
TLMENKDKMDNLVVQALESNLAIIRFDLTKRVAFVNDNFAEALGYKREELLGMHHHMFC
CCCCCHHHHHHHHHHHHHCCCEEEEEEHHHHEEEECCCHHHHHCCCHHHHHHHHHHHHH
FDTFVQSEDYELFWNRLFSGKSYQNKIKRKDANGKPIWLEVTYMPVFDEDNKVVAISKIA
HHHHHCCCCHHHHHHHHHCCCHHHHHHHHCCCCCCEEEEEEEEEEEECCCCCEEEEHHHH
TNVTEREEKVQSLAYEFKEVAQGINEKSTSGTKNIHLLTESFQSVSEIMDKNGEMITTFL
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHHHHCCCCEEEHHH
AQTDEINSIVTTVKRIARQTKLLALNAAIEAAHAGEFGKGFNVVANEVKKLAGDVEDSVV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHH
DISNIVDAITNGSHQIKDGALQIEVNIENSQDHLNRTIEDFEEISSTSQILNERSNSFNN
HHHHHHHHHHCCCCEECCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
LF
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]