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The map label for this gene is gatC

Identifier: 23098219

GI number: 23098219

Start: 815993

End: 816283

Strand: Direct

Name: gatC

Synonym: OB0764

Alternate gene names: 23098219

Gene position: 815993-816283 (Clockwise)

Preceding gene: 23098218

Following gene: 23098220

Centisome position: 22.48

GC content: 38.49

Gene sequence:

>291_bases
ATGGCAGAGATTTCAAAAGATCAAGTGAAGCATGTTGCTCACTTAGCTCGTCTAGAATTAGACGATGAAGCTGTTGAAAA
GATGTCGGACGAGTTGAGTGCGATTATTGATTTTGCTGAACAATTAAATGAACTGGATACGGATTCTGTAGAACCTACTA
CACACGTACTTAATCTTAAGAATGTAATGCGAAAAGATGAACCGAAGAAATGGATAAGCCAGGAAGACGCATTGCGTAAT
GCTCCTGATCATAAAGATGGTCAAATTCGTGTTCCATCGATATTAGAATAG

Upstream 100 bases:

>100_bases
TTGCCTTCAATAAGCTATCTTTGCTATTATCAATAGTGTTATAATAGGGGAATGAAAAAAATGTAGATACATGTTAGAAA
ACATATAGGAGGTACATACA

Downstream 100 bases:

>100_bases
GGAGGAGAAAATCATTATGTCTTTATTTGATTACACTATAAAAGAATTAGAAGAAAAGCTACATAATAAAGAAATTACGG
TTGAAGATCTAGTTAAAGAA

Product: aspartyl/glutamyl-tRNA amidotransferase subunit C

Products: NA

Alternate protein names: Asp/Glu-ADT subunit C

Number of amino acids: Translated: 96; Mature: 95

Protein sequence:

>96_residues
MAEISKDQVKHVAHLARLELDDEAVEKMSDELSAIIDFAEQLNELDTDSVEPTTHVLNLKNVMRKDEPKKWISQEDALRN
APDHKDGQIRVPSILE

Sequences:

>Translated_96_residues
MAEISKDQVKHVAHLARLELDDEAVEKMSDELSAIIDFAEQLNELDTDSVEPTTHVLNLKNVMRKDEPKKWISQEDALRN
APDHKDGQIRVPSILE
>Mature_95_residues
AEISKDQVKHVAHLARLELDDEAVEKMSDELSAIIDFAEQLNELDTDSVEPTTHVLNLKNVMRKDEPKKWISQEDALRNA
PDHKDGQIRVPSILE

Specific function: Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction take

COG id: COG0721

COG function: function code J; Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gatC family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GATC_OCEIH (Q8ES79)

Other databases:

- EMBL:   BA000028
- RefSeq:   NP_691685.1
- ProteinModelPortal:   Q8ES79
- SMR:   Q8ES79
- GeneID:   1016292
- GenomeReviews:   BA000028_GR
- KEGG:   oih:OB0764
- NMPDR:   fig|221109.1.peg.772
- HOGENOM:   HBG586403
- OMA:   PTSHAVP
- ProtClustDB:   PRK00034
- BioCyc:   OIHE221109:OB0764-MONOMER
- GO:   GO:0006412
- HAMAP:   MF_00122
- InterPro:   IPR003837
- TIGRFAMs:   TIGR00135

Pfam domain/function: PF02686 Glu-tRNAGln

EC number: 6.3.5.-

Molecular weight: Translated: 10943; Mature: 10812

Theoretical pI: Translated: 4.44; Mature: 4.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEISKDQVKHVAHLARLELDDEAVEKMSDELSAIIDFAEQLNELDTDSVEPTTHVLNLK
CCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
NVMRKDEPKKWISQEDALRNAPDHKDGQIRVPSILE
HHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AEISKDQVKHVAHLARLELDDEAVEKMSDELSAIIDFAEQLNELDTDSVEPTTHVLNLK
CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
NVMRKDEPKKWISQEDALRNAPDHKDGQIRVPSILE
HHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12235376